chr3
:
48,661,275
–
48,664,636
3,361 bp
1249 TFs
17 linked genes
This 3.4 kb open chromatin element is linked to 17 target genes and is bound by 1249 transcription factors.
Distance
All
At TSS
Distal
Link type
All
Proximity
Multiome
Multiome+HiCAR
Gene ↕
Expression
Dist. to TSS ↑
Distance ↕
Link type ↕
CELSR3
at TSS
At TSS
Proximity
LINC02585
at TSS
At TSS
Proximity
NCKIPSD
24.2 kb
Distal
Multiome
SLC26A6
26.3 kb
Distal
Multiome
UQCRC1
52.0 kb
Distal
Multiome
IP6K2
55.5 kb
Distal
Multiome
COL7A1
96.7 kb
Distal
Multiome
PFKFB4
104.7 kb
Distal
Multiome
SHISA5
157.5 kb
Distal
Multiome
PRKAR2A
185.9 kb
Distal
Multiome
ATRIP
215.0 kb
Distal
Multiome
TMA7
221.5 kb
Distal
Multiome
CCDC51
221.6 kb
Distal
Multiome
PLXNB1
232.2 kb
Distal
Multiome
SLC25A20
234.9 kb
Distal
Multiome
ARIH2
257.1 kb
Distal
Multiome
WDR6
343.4 kb
Distal
Multiome+HiCAR
Genome Browser
Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.
View limited to ±500 kb around this element. For the full data, please see the UCSC track linked below.
Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.
CTCF
1078 datasets
ChIP
CD4-positive, alpha-beta T cell
ENCFF277LDE
631 bp overlap
ChIP
CD4-positive, alpha-beta T cell
ENCFF277LDE
484 bp overlap
ChIP
CD8-positive, alpha-beta T cell
ENCFF092PSD
617 bp overlap
ChIP
activated CD4-positive, alpha-beta T cell
ENCFF095PZX
514 bp overlap
ChIP
activated CD4-positive, alpha-beta T cell
ENCFF095PZX
574 bp overlap
ChIP
activated CD8-positive, alpha-beta T cell
ENCFF006MHW
518 bp overlap
ChIP
activated CD8-positive, alpha-beta T cell
ENCFF006MHW
239 bp overlap
ChIP
astrocyte of the cerebellum
ENCFF511OCS
218 bp overlap
ChIP
astrocyte of the spinal cord
ENCFF213GKL
212 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
248 bp overlap
ChIP
bronchial epithelial cell
ENCFF500SEA
290 bp overlap
ChIP
choroid plexus epithelial cell
ENCFF407YNR
245 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF038KTR
256 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF041CKA
319 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF046GNG
296 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF087VBI
148 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF092NXX
485 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF149PUN
171 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF230SFD
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF235CPK
391 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF235CPK
331 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF245PVD
477 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF245PVD
355 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF255MAF
247 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF257LSY
429 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF258PHG
240 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF265AZL
273 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF265AZL
427 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF267VHH
501 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF267VHH
501 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF267VHH
426 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277CZQ
505 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277CZQ
458 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277YTN
291 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF282ONV
356 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF282ONV
434 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF311KBD
332 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF327VLN
422 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF338KEP
541 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF338KEP
541 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF338KEP
459 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF354RKX
359 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF359BHR
316 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF373BUI
320 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF377YBQ
457 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF377YBQ
377 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF394MUG
421 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF403LNW
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF403LNW
395 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF406ZHG
511 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF406ZHG
388 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
545 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
396 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF442YDO
344 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF457ZGY
264 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF458OBF
511 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF458OBF
511 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF458OBF
397 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF476NBQ
425 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF478RRB
317 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF483ZLP
382 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF514PNC
345 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF562MJV
281 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF595WAL
491 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF595WAL
390 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF604JAV
250 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF628TCI
463 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF631JNO
497 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF631JNO
342 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF641PIN
376 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF662EUG
421 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF677SUG
280 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696ASB
388 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696JOF
505 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696JOF
343 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF733NZH
451 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF733NZH
401 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
406 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF749FBO
477 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF749FBO
353 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF756TDJ
400 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF767LNC
354 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF784LWO
190 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
551 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
551 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
452 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812JWS
141 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
537 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
537 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
425 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF841TWE
367 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF851XUX
323 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF883PFA
276 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF896AZK
219 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF974AQC
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF974AQC
316 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF455OQM
197 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF677IZD
232 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF947JAB
255 bp overlap
ChIP
epithelial cell of esophagus
ENCFF946GGT
139 bp overlap
ChIP
epithelial cell of prostate
ENCFF086GTI
819 bp overlap
ChIP
epithelial cell of proximal tubule
ENCFF763ZKS
289 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF045JBW
175 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF182PYY
351 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF421MEH
172 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF534UGM
310 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF544GAS
377 bp overlap
ChIP
esophagus squamous epithelium
ENCFF037IYT
397 bp overlap
ChIP
esophagus squamous epithelium
ENCFF037IYT
363 bp overlap
ChIP
esophagus squamous epithelium
ENCFF571ODZ
365 bp overlap
ChIP
esophagus squamous epithelium
ENCFF683HYK
183 bp overlap
ChIP
esophagus squamous epithelium
ENCFF700BXI
190 bp overlap
ChIP
esophagus squamous epithelium
ENCFF797YPG
115 bp overlap
ChIP
esophagus squamous epithelium
ENCFF797YPG
425 bp overlap
ChIP
esophagus squamous epithelium
ENCFF884RED
451 bp overlap
ChIP
fibroblast of mammary gland
ENCFF109AZU
265 bp overlap
ChIP
fibroblast of pulmonary artery
ENCFF742RSV
263 bp overlap
ChIP
fibroblast of the aortic adventitia
ENCFF639DMR
183 bp overlap
ChIP
fibroblast of villous mesenchyme
ENCFF345VQO
268 bp overlap
ChIP
gastroesophageal sphincter
ENCFF125ESZ
445 bp overlap
ChIP
gastroesophageal sphincter
ENCFF125ESZ
356 bp overlap
ChIP
gastroesophageal sphincter
ENCFF546QIK
300 bp overlap
ChIP
gastroesophageal sphincter
ENCFF569YIT
295 bp overlap
ChIP
gastroesophageal sphincter
ENCFF582GAX
341 bp overlap
ChIP
gastroesophageal sphincter
ENCFF607YRA
353 bp overlap
ChIP
gastroesophageal sphincter
ENCFF918KPI
227 bp overlap
ChIP
left ventricle myocardium inferior
ENCFF161DPW
405 bp overlap
ChIP
lower lobe of left lung
ENCFF150FXW
226 bp overlap
ChIP
lower lobe of left lung
ENCFF150FXW
433 bp overlap
ChIP
lower lobe of left lung
ENCFF906NCV
195 bp overlap
ChIP
lower lobe of right lung
ENCFF092XHT
273 bp overlap
ChIP
lower lobe of right lung
ENCFF092XHT
409 bp overlap
ChIP
mammary epithelial cell
ENCFF164SPU
243 bp overlap
ChIP
mesothelial cell of epicardium
ENCFF427RFE
571 bp overlap
ChIP
mesothelial cell of epicardium
ENCFF427RFE
489 bp overlap
ChIP
mucosa of descending colon
ENCFF478SWS
411 bp overlap
ChIP
mucosa of descending colon
ENCFF478SWS
385 bp overlap
ChIP
nephron progenitor cell
ENCFF455DMI
331 bp overlap
ChIP
progenitor cell of endocrine pancreas
ENCFF492KHV
413 bp overlap
ChIP
retinal pigment epithelial cell
ENCFF810AAG
193 bp overlap
ChIP
right atrium auricular region
ENCFF471FFM
465 bp overlap
ChIP
right atrium auricular region
ENCFF690LBT
297 bp overlap
ChIP
right atrium auricular region
ENCFF696NTN
505 bp overlap
ChIP
right atrium auricular region
ENCFF696NTN
411 bp overlap
ChIP
skeletal muscle myoblast
ENCFF813BQI
213 bp overlap
ChIP
upper lobe of left lung
ENCFF108BCY
421 bp overlap
ChIP
upper lobe of left lung
ENCFF170ORD
497 bp overlap
ChIP
upper lobe of left lung
ENCFF170ORD
417 bp overlap
ChIP
upper lobe of left lung
ENCFF277NLT
242 bp overlap
ChIP
upper lobe of left lung
ENCFF374MAK
411 bp overlap
ChIP
upper lobe of left lung
ENCFF645BXH
178 bp overlap
ChIP
upper lobe of left lung
ENCFF654BFF
219 bp overlap
ChIP
upper lobe of left lung
ENCFF962AIJ
320 bp overlap
ChIP
upper lobe of right lung
ENCFF065JCM
257 bp overlap
POLR2A
211 datasets
ChIP
endothelial cell of umbilical vein
ENCFF091YHT
405 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF131DWO
201 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF303XUJ
461 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF303XUJ
461 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF467WJF
537 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF432ZCY
465 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF617PTB
301 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF759BBR
238 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF759BBR
211 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF759BBR
443 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF759BBR
269 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF791ZXN
531 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF791ZXN
408 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF791ZXN
997 bp overlap
ChIP
esophagus squamous epithelium
ENCFF708IOX
461 bp overlap
ChIP
esophagus squamous epithelium
ENCFF708IOX
116 bp overlap
ChIP
gastroesophageal sphincter
ENCFF070PCA
341 bp overlap
ChIP
gastroesophageal sphincter
ENCFF238INU
511 bp overlap
ChIP
gastroesophageal sphincter
ENCFF461UHJ
421 bp overlap
ChIP
gastroesophageal sphincter
ENCFF826EZZ
417 bp overlap
ChIP
gastroesophageal sphincter
ENCFF826EZZ
417 bp overlap
ChIP
upper lobe of left lung
ENCFF199JUI
106 bp overlap
ChIP
upper lobe of left lung
ENCFF199JUI
405 bp overlap
ChIP
upper lobe of left lung
ENCFF199JUI
161 bp overlap
ChIP
upper lobe of left lung
ENCFF504HCM
445 bp overlap
ChIP
upper lobe of left lung
ENCFF603FIH
405 bp overlap
ChIP
upper lobe of left lung
ENCFF640VPA
323 bp overlap
No results match the current filters