This gene encodes a zinc finger protein containing five C2H2-type zinc finger domains, one or two Kruppel-associated box A (KRAB A) domains, and a leucine-rich domain. The encoded protein has been suggested to be a transcriptional repressor. It localizes predominantly to the nucleolus. Alternatively spliced transcript variants encoding different isoforms exist. These variants utilize alternative polyadenylation signals. [provided by RefSeq, Jul 2008]
Transcription factors with Perturb-seq knockdown data for ZNF274. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ZNF274 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ZNF274, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr19:57,410,944–57,411,658 | 771.9 kb | Distal (>10kb) Multiome HiCAR | 612 | |
| chr19:57,434,797–57,436,077 | 747.7 kb | Distal (>10kb) Multiome HiCAR | 742 | |
| chr19:57,887,264–57,887,897 | 295.5 kb | Distal (>10kb) Multiome | 47 | |
| chr19:57,888,389–57,889,457 | 294.0 kb | Distal (>10kb) Multiome | 322 | |
| chr19:57,916,199–57,917,124 | 266.3 kb | Distal (>10kb) Multiome | 535 | |
| chr19:57,934,907–57,935,617 | 247.7 kb | Distal (>10kb) Multiome | 259 | |
| chr19:57,947,388–57,948,012 | 235.3 kb | Distal (>10kb) Multiome | 675 | |
| chr19:58,002,336–58,003,368 | 180.2 kb | Distal (>10kb) Multiome | 830 | |
| chr19:58,059,066–58,059,937 | 123.7 kb | Distal (>10kb) Multiome | 284 | |
| chr19:58,097,783–58,098,870 | 84.7 kb | Distal (>10kb) Multiome | 458 | |
| chr19:58,150,278–58,150,941 | 32.4 kb | Distal (>10kb) Multiome | 533 | |
| chr19:58,154,448–58,155,527 | 27.9 kb | Distal (>10kb) Multiome | 802 | |
| chr19:58,182,544–58,183,906 | 152 bp | At TSS Multiome | 1019 | |
| chr19:58,228,362–58,229,199 | 45.8 kb | Distal (>10kb) Multiome | 706 | |
| chr19:58,278,271–58,279,774 | 95.8 kb | Distal (>10kb) Multiome | 950 | |
| chr19:58,304,887–58,305,868 | 122.3 kb | Distal (>10kb) Multiome | 858 | |
| chr19:58,326,789–58,327,710 | 144.0 kb | Distal (>10kb) Multiome | 985 | |
| chr19:58,347,086–58,347,987 | 164.6 kb | Distal (>10kb) Multiome | 467 | |
| chr19:58,356,174–58,356,775 | 173.4 kb | Distal (>10kb) Multiome | 101 | |
| chr19:58,361,859–58,363,243 | 179.7 kb | Distal (>10kb) Multiome | 972 | |
| chr19:58,380,269–58,381,636 | 198.0 kb | Distal (>10kb) Multiome | 1044 | |
| chr19:58,386,311–58,387,531 | 204.0 kb | Distal (>10kb) Multiome | 1010 | |
| chr19:58,395,438–58,396,606 | 212.6 kb | Distal (>10kb) Multiome | 448 | |
| chr19:58,400,803–58,401,800 | 218.3 kb | Distal (>10kb) Multiome | 728 | |
| chr19:58,408,032–58,409,025 | 225.5 kb | Distal (>10kb) Multiome | 854 | |
| chr19:58,451,175–58,452,075 | 268.5 kb | Distal (>10kb) Multiome | 702 | |
| chr19:58,466,585–58,467,517 | 283.9 kb | Distal (>10kb) Multiome | 701 | |
| chr19:58,475,442–58,476,812 | 292.9 kb | Distal (>10kb) Multiome | 934 |
Genomic view of the ZNF274 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.