ZNF713
zinc finger protein 713 | FLJ39963

The protein encoded by this gene contains C2H2 zinc finger domains. In some individuals, a CGG-repeat expansion from 5-22 repeats to 68-450 repeats has been identified in the first intron of this gene. This mutation is thought to effect the expression of this gene and it has been proposed that it may be associated with Autistic Spectrum Disorder. [provided by RefSeq, Jul 2016]

Member of: DE-2 DE-2.32
Biological processes 8 terms
Expression (TPM)
ZNF713 — as a Regulated Gene

TFs regulating ZNF713 0 TFs

Transcription factors with Perturb-seq knockdown data for ZNF713. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ZNF713 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ZNF713

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ZNF713, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr7:55,657,601–55,658,293 229.6 kb Distal (>10kb) Multiome 209
chr7:55,886,966–55,887,754 24 bp At TSS Multiome 546
chr7:55,951,547–55,952,549 64.4 kb Distal (>10kb) Multiome 801
chr7:55,964,099–55,965,278 77.2 kb Distal (>10kb) Multiome 738
chr7:56,033,660–56,034,707 146.8 kb Distal (>10kb) Multiome 673
chr7:56,051,159–56,052,300 164.2 kb Distal (>10kb) Multiome 882
chr7:56,063,656–56,065,393 176.8 kb Distal (>10kb) Multiome 926
chr7:56,074,109–56,074,780 187.0 kb Distal (>10kb) Multiome 423
chr7:56,106,168–56,106,786 219.1 kb Distal (>10kb) Multiome 866

Genome Browser

Genomic view of the ZNF713 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr7:55,647,601 – 56,116,786
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq