The bone morphogenetic protein (BMP) receptors are a family of transmembrane serine/threonine kinases that include the type I receptors BMPR1A and BMPR1B and the type II receptor BMPR2. These receptors are also closely related to the activin receptors, ACVR1 and ACVR2. The ligands of these receptors are members of the TGF-beta superfamily. TGF-betas and activins transduce their signals through the formation of heteromeric complexes with 2 different types of serine (threonine) kinase receptors: type I receptors of about 50-55 kD and type II receptors of about 70-80 kD. Type II receptors bind ligands in the absence of type I receptors, but they require their respective type I receptors for signaling, whereas type I receptors require their respective type II receptors for ligand binding. [provided by RefSeq, Jul 2008]
Transcription factors with Perturb-seq knockdown data for BMPR1A. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = BMPR1A upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of BMPR1A, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr10:86,520,920–86,522,476 | 234.8 kb | Distal (>10kb) Multiome | 901 | |
| chr10:86,535,238–86,536,949 | 221.1 kb | Distal (>10kb) Multiome | 617 | |
| chr10:86,585,119–86,585,766 | 171.0 kb | Distal (>10kb) Multiome | 421 | |
| chr10:86,599,659–86,600,297 | 156.7 kb | Distal (>10kb) Multiome | 111 | |
| chr10:86,631,854–86,632,698 | 124.4 kb | Distal (>10kb) Multiome | 226 | |
| chr10:86,693,793–86,694,266 | 62.7 kb | Distal (>10kb) Multiome | 132 | |
| chr10:86,710,752–86,712,521 | 45.3 kb | Distal (>10kb) Multiome | 898 | |
| chr10:86,755,517–86,757,638 | 137 bp | At TSS Multiome | 902 | |
| chr10:86,864,876–86,866,168 | 108.6 kb | Distal (>10kb) Multiome | 123 | |
| chr10:86,939,081–86,939,963 | 182.9 kb | Distal (>10kb) Multiome | 539 | |
| chr10:86,953,950–86,955,264 | 197.9 kb | Distal (>10kb) Multiome | 348 | |
| chr10:86,959,879–86,960,855 | 203.9 kb | Distal (>10kb) Multiome | 453 | |
| chr10:86,966,444–86,967,440 | 210.3 kb | Distal (>10kb) Multiome | 479 | |
| chr10:86,969,969–86,972,224 | 214.8 kb | Distal (>10kb) Multiome | 505 | |
| chr10:87,054,811–87,055,712 | 298.6 kb | Distal (>10kb) Multiome | 179 |
Genomic view of the BMPR1A locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.