SAP130
Sin3A associated protein 130 | FLJ12761
SAP130 — as a Regulated Gene

TFs regulating SAP130 0 TFs

Transcription factors with Perturb-seq knockdown data for SAP130. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = SAP130 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to SAP130

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of SAP130, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr2:127,810,532–127,811,650 216.8 kb Distal (>10kb) Multiome 948
chr2:127,857,714–127,858,658 169.9 kb Distal (>10kb) Multiome 924
chr2:127,859,716–127,860,274 168.2 kb Distal (>10kb) Multiome 286
chr2:127,885,860–127,886,795 141.8 kb Distal (>10kb) Multiome 331
chr2:128,026,821–128,028,727 660 bp At TSS Multiome 872
chr2:128,090,830–128,091,736 63.1 kb Distal (>10kb) Multiome 987
chr2:128,195,741–128,196,874 168.3 kb Distal (>10kb) Multiome 365
chr2:128,232,712–128,234,252 205.5 kb Distal (>10kb) Multiome 834
chr2:128,234,465–128,235,115 206.8 kb Distal (>10kb) Multiome 66
chr2:128,260,688–128,261,545 232.9 kb Distal (>10kb) Multiome 352
chr2:128,317,236–128,318,078 289.4 kb Distal (>10kb) Multiome 437
chr2:128,318,609–128,319,523 290.9 kb Distal (>10kb) Multiome 550
chr2:128,321,402–128,322,797 294.0 kb Distal (>10kb) Multiome 727

Genome Browser

Genomic view of the SAP130 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr2:127,800,532 – 128,332,797
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq