chr3
:
49,339,607
–
49,340,853
1,246 bp
1045 TFs
14 linked genes
This 1.2 kb open chromatin element is linked to 14 target genes and is bound by 1045 transcription factors.
Distance
All
At TSS
Distal
Link type
All
Proximity
Multiome
Multiome+HiCAR
Gene ↕
Expression
Dist. to TSS ↑
Distance ↕
Link type ↕
USP4
at TSS
At TSS
Proximity
GPX1
18.2 kb
Distal
Multiome
C3orf62
63.4 kb
Distal
Multiome
RHOA
71.8 kb
Distal
Multiome
TCTA
72.2 kb
Distal
Multiome
AMT
82.3 kb
Distal
Multiome+HiCAR
NICN1
89.1 kb
Distal
Multiome+HiCAR
DAG1
130.1 kb
Distal
Multiome
CCDC71
173.9 kb
Distal
Multiome
LAMB2
207.1 kb
Distal
Multiome
BSN
214.3 kb
Distal
Multiome
USP19
219.2 kb
Distal
Multiome
QARS1
235.4 kb
Distal
Multiome
QRICH1
246.1 kb
Distal
Multiome
Genome Browser
Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.
View limited to ±500 kb around this element. For the full data, please see the UCSC track linked below.
Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.
CTCF
1394 datasets
ChIP
CD4-positive, alpha-beta T cell
ENCFF277LDE
435 bp overlap
ChIP
CD8-positive, alpha-beta T cell
ENCFF092PSD
431 bp overlap
ChIP
activated CD4-positive, alpha-beta T cell
ENCFF095PZX
519 bp overlap
ChIP
astrocyte of the cerebellum
ENCFF511OCS
171 bp overlap
ChIP
astrocyte of the spinal cord
ENCFF213GKL
261 bp overlap
ChIP
astrocyte of the spinal cord
ENCFF213GKL
159 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
93 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
219 bp overlap
ChIP
bronchial epithelial cell
ENCFF500SEA
190 bp overlap
ChIP
bronchial epithelial cell
ENCFF500SEA
157 bp overlap
ChIP
choroid plexus epithelial cell
ENCFF407YNR
117 bp overlap
ChIP
choroid plexus epithelial cell
ENCFF407YNR
230 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF038KTR
215 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF038KTR
282 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF041CKA
457 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF046GNG
431 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF087VBI
131 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF149PUN
161 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF230SFD
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF235CPK
200 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF235CPK
99 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF245PVD
183 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF255MAF
397 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF255MAF
318 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF257LSY
387 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF257LSY
525 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF258PHG
437 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF258PHG
437 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF265AZL
491 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF265AZL
491 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277CZQ
295 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277YTN
173 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277YTN
336 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF311KBD
310 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF327VLN
309 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF338KEP
347 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF338KEP
541 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF354RKX
270 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF354RKX
481 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF359BHR
485 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF359BHR
485 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF373BUI
183 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF373BUI
335 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF377YBQ
256 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF377YBQ
157 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF394MUG
421 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF403LNW
133 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF403LNW
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF406ZHG
317 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF406ZHG
511 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
395 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
545 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
259 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF442YDO
266 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF457ZGY
115 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF458OBF
148 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF458OBF
511 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF478RRB
170 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF483ZLP
239 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF483ZLP
501 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF514PNC
221 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF514PNC
336 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF562MJV
175 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF595WAL
491 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF595WAL
491 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF604JAV
441 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF604JAV
363 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF604JAV
161 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF628TCI
336 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF631JNO
271 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF641PIN
297 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF641PIN
431 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF677SUG
360 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF677SUG
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696ASB
231 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696JOF
219 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF733NZH
342 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
295 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
143 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF749FBO
477 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF756TDJ
322 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF767LNC
204 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF784LWO
425 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF784LWO
331 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
288 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
551 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812JWS
324 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
407 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
537 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
252 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF841TWE
237 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF851XUX
218 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF883PFA
437 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF883PFA
437 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF896AZK
204 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF974AQC
271 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF974AQC
517 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF455OQM
197 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF455OQM
67 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF677IZD
261 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF677IZD
258 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF947JAB
308 bp overlap
ChIP
epithelial cell of esophagus
ENCFF946GGT
305 bp overlap
ChIP
epithelial cell of esophagus
ENCFF946GGT
280 bp overlap
ChIP
epithelial cell of prostate
ENCFF086GTI
1030 bp overlap
ChIP
epithelial cell of proximal tubule
ENCFF763ZKS
236 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF045JBW
294 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF045JBW
461 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF421MEH
421 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF534UGM
262 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF534UGM
234 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF544GAS
245 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF544GAS
124 bp overlap
ChIP
esophagus squamous epithelium
ENCFF037IYT
224 bp overlap
ChIP
esophagus squamous epithelium
ENCFF037IYT
198 bp overlap
ChIP
esophagus squamous epithelium
ENCFF571ODZ
239 bp overlap
ChIP
esophagus squamous epithelium
ENCFF683HYK
351 bp overlap
ChIP
esophagus squamous epithelium
ENCFF683HYK
263 bp overlap
ChIP
esophagus squamous epithelium
ENCFF700BXI
397 bp overlap
ChIP
esophagus squamous epithelium
ENCFF884RED
451 bp overlap
ChIP
esophagus squamous epithelium
ENCFF884RED
451 bp overlap
ChIP
fibroblast of mammary gland
ENCFF109AZU
253 bp overlap
ChIP
fibroblast of pulmonary artery
ENCFF742RSV
297 bp overlap
ChIP
fibroblast of pulmonary artery
ENCFF742RSV
201 bp overlap
ChIP
fibroblast of the aortic adventitia
ENCFF639DMR
217 bp overlap
ChIP
fibroblast of the aortic adventitia
ENCFF639DMR
217 bp overlap
ChIP
fibroblast of villous mesenchyme
ENCFF345VQO
321 bp overlap
ChIP
fibroblast of villous mesenchyme
ENCFF345VQO
210 bp overlap
ChIP
gastroesophageal sphincter
ENCFF125ESZ
288 bp overlap
ChIP
gastroesophageal sphincter
ENCFF125ESZ
350 bp overlap
ChIP
gastroesophageal sphincter
ENCFF546QIK
259 bp overlap
ChIP
gastroesophageal sphincter
ENCFF546QIK
457 bp overlap
ChIP
gastroesophageal sphincter
ENCFF569YIT
268 bp overlap
ChIP
gastroesophageal sphincter
ENCFF569YIT
451 bp overlap
ChIP
gastroesophageal sphincter
ENCFF569YIT
346 bp overlap
ChIP
gastroesophageal sphincter
ENCFF582GAX
341 bp overlap
ChIP
gastroesophageal sphincter
ENCFF582GAX
312 bp overlap
ChIP
gastroesophageal sphincter
ENCFF607YRA
864 bp overlap
ChIP
gastroesophageal sphincter
ENCFF918KPI
100 bp overlap
ChIP
gastroesophageal sphincter
ENCFF918KPI
268 bp overlap
ChIP
left ventricle myocardium inferior
ENCFF161DPW
343 bp overlap
ChIP
left ventricle myocardium inferior
ENCFF161DPW
471 bp overlap
ChIP
left ventricle myocardium inferior
ENCFF161DPW
284 bp overlap
ChIP
lower lobe of right lung
ENCFF092XHT
457 bp overlap
ChIP
lower lobe of right lung
ENCFF092XHT
242 bp overlap
ChIP
mammary epithelial cell
ENCFF164SPU
265 bp overlap
ChIP
mammary epithelial cell
ENCFF164SPU
108 bp overlap
ChIP
mammary epithelial cell
ENCFF873ERE
265 bp overlap
ChIP
mucosa of descending colon
ENCFF478SWS
411 bp overlap
ChIP
progenitor cell of endocrine pancreas
ENCFF492KHV
437 bp overlap
ChIP
progenitor cell of endocrine pancreas
ENCFF492KHV
241 bp overlap
ChIP
retinal pigment epithelial cell
ENCFF810AAG
125 bp overlap
ChIP
right atrium auricular region
ENCFF471FFM
465 bp overlap
ChIP
right atrium auricular region
ENCFF690LBT
297 bp overlap
ChIP
right atrium auricular region
ENCFF696NTN
562 bp overlap
ChIP
skeletal muscle myoblast
ENCFF813BQI
291 bp overlap
ChIP
skeletal muscle myoblast
ENCFF813BQI
153 bp overlap
ChIP
upper lobe of left lung
ENCFF108BCY
182 bp overlap
ChIP
upper lobe of left lung
ENCFF108BCY
421 bp overlap
ChIP
upper lobe of left lung
ENCFF108BCY
332 bp overlap
ChIP
upper lobe of left lung
ENCFF277NLT
431 bp overlap
ChIP
upper lobe of left lung
ENCFF277NLT
141 bp overlap
ChIP
upper lobe of left lung
ENCFF374MAK
411 bp overlap
ChIP
upper lobe of left lung
ENCFF374MAK
334 bp overlap
ChIP
upper lobe of left lung
ENCFF645BXH
431 bp overlap
ChIP
upper lobe of left lung
ENCFF645BXH
328 bp overlap
ChIP
upper lobe of left lung
ENCFF654BFF
367 bp overlap
ChIP
upper lobe of left lung
ENCFF962AIJ
253 bp overlap
ChIP
upper lobe of left lung
ENCFF962AIJ
289 bp overlap
ChIP
upper lobe of right lung
ENCFF065JCM
215 bp overlap
POLR2A
196 datasets
ChIP
endothelial cell of umbilical vein
ENCFF091YHT
184 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF131DWO
201 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF131DWO
96 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF303XUJ
403 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF467WJF
178 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF432ZCY
197 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF432ZCY
94 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF617PTB
301 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF617PTB
110 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF759BBR
442 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF759BBR
225 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF791ZXN
644 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF791ZXN
211 bp overlap
ChIP
esophagus squamous epithelium
ENCFF297FPP
391 bp overlap
ChIP
esophagus squamous epithelium
ENCFF297FPP
134 bp overlap
ChIP
esophagus squamous epithelium
ENCFF708IOX
582 bp overlap
ChIP
esophagus squamous epithelium
ENCFF708IOX
72 bp overlap
ChIP
gastroesophageal sphincter
ENCFF043KAM
197 bp overlap
ChIP
gastroesophageal sphincter
ENCFF043KAM
101 bp overlap
ChIP
gastroesophageal sphincter
ENCFF043KAM
164 bp overlap
ChIP
gastroesophageal sphincter
ENCFF070PCA
199 bp overlap
ChIP
gastroesophageal sphincter
ENCFF070PCA
178 bp overlap
ChIP
gastroesophageal sphincter
ENCFF238INU
270 bp overlap
ChIP
gastroesophageal sphincter
ENCFF461UHJ
302 bp overlap
ChIP
gastroesophageal sphincter
ENCFF826EZZ
115 bp overlap
ChIP
upper lobe of left lung
ENCFF095BJW
371 bp overlap
ChIP
upper lobe of left lung
ENCFF095BJW
233 bp overlap
ChIP
upper lobe of left lung
ENCFF199JUI
503 bp overlap
ChIP
upper lobe of left lung
ENCFF199JUI
165 bp overlap
ChIP
upper lobe of left lung
ENCFF504HCM
445 bp overlap
ChIP
upper lobe of left lung
ENCFF504HCM
142 bp overlap
ChIP
upper lobe of left lung
ENCFF603FIH
405 bp overlap
ChIP
upper lobe of left lung
ENCFF603FIH
196 bp overlap
ChIP
upper lobe of left lung
ENCFF640VPA
774 bp overlap
ChIP
upper lobe of left lung
ENCFF640VPA
230 bp overlap
No results match the current filters