chr2
:
166,375,161
–
166,377,020
1,859 bp
942 TFs
3 linked genes
This 1.9 kb open chromatin element is linked to SCN9A, SCN1A, and SCN1A-AS1 and is bound by 942 transcription factors.
Distance
All
At TSS
Distal
Link type
All
Proximity
Multiome
Gene ↕
Expression
Dist. to TSS ↑
Distance ↕
Link type ↕
SCN9A
at TSS
At TSS
Proximity
SCN1A
248.1 kb
Distal
Multiome
SCN1A-AS1
418.9 kb
Distal
Multiome
Genome Browser
Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.
View limited to ±500 kb around this element. For the full data, please see the UCSC track linked below.
Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.
CTCF
320 datasets
ChIP
astrocyte of the spinal cord
ENCFF213GKL
261 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
281 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
281 bp overlap
ChIP
choroid plexus epithelial cell
ENCFF407YNR
277 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF631JNO
497 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696JOF
505 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF733NZH
451 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
537 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
537 bp overlap
ChIP
epithelial cell of prostate
ENCFF086GTI
337 bp overlap
ChIP
epithelial cell of prostate
ENCFF086GTI
651 bp overlap
ChIP
gastroesophageal sphincter
ENCFF607YRA
155 bp overlap
ChIP
gastroesophageal sphincter
ENCFF607YRA
445 bp overlap
ChIP
lower lobe of left lung
ENCFF906NCV
461 bp overlap
ChIP
lower lobe of left lung
ENCFF906NCV
461 bp overlap
ChIP
progenitor cell of endocrine pancreas
ENCFF492KHV
437 bp overlap
ChIP
upper lobe of left lung
ENCFF962AIJ
425 bp overlap
No results match the current filters