chr3
:
48,685,362
–
48,686,531
1,169 bp
770 TFs
15 linked genes
This 1.2 kb open chromatin element is linked to 15 target genes and is bound by 770 transcription factors.
Distance
All
At TSS
Distal
Link type
All
Proximity
Multiome
Multiome+HiCAR
Gene ↕
Expression
Dist. to TSS ↑
Distance ↕
Link type ↕
NCKIPSD
at TSS
At TSS
Proximity
CELSR3
23.0 kb
Distal
Multiome
IP6K2
31.3 kb
Distal
Multiome
SLC26A6
50.4 kb
Distal
Multiome
UQCRC1
76.2 kb
Distal
Multiome
COL7A1
120.9 kb
Distal
Multiome
PFKFB4
128.9 kb
Distal
Multiome
PRKAR2A
161.7 kb
Distal
Multiome+HiCAR
SHISA5
181.7 kb
Distal
Multiome
SLC25A20
213.0 kb
Distal
Multiome
ARIH2
233.0 kb
Distal
Multiome
ATRIP
239.2 kb
Distal
Multiome
TMA7
245.6 kb
Distal
Multiome
CCDC51
245.8 kb
Distal
Multiome
PLXNB1
256.4 kb
Distal
Multiome
Genome Browser
Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.
View limited to ±500 kb around this element. For the full data, please see the UCSC track linked below.
Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.
CTCF
1337 datasets
ChIP
CD4-positive, alpha-beta T cell
ENCFF277LDE
444 bp overlap
ChIP
CD4-positive, alpha-beta T cell
ENCFF277LDE
323 bp overlap
ChIP
CD8-positive, alpha-beta T cell
ENCFF092PSD
295 bp overlap
ChIP
CD8-positive, alpha-beta T cell
ENCFF092PSD
617 bp overlap
ChIP
activated CD4-positive, alpha-beta T cell
ENCFF095PZX
967 bp overlap
ChIP
activated CD8-positive, alpha-beta T cell
ENCFF006MHW
358 bp overlap
ChIP
activated CD8-positive, alpha-beta T cell
ENCFF006MHW
651 bp overlap
ChIP
astrocyte of the cerebellum
ENCFF511OCS
197 bp overlap
ChIP
astrocyte of the cerebellum
ENCFF511OCS
243 bp overlap
ChIP
astrocyte of the spinal cord
ENCFF213GKL
261 bp overlap
ChIP
astrocyte of the spinal cord
ENCFF213GKL
199 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
281 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
232 bp overlap
ChIP
bronchial epithelial cell
ENCFF500SEA
321 bp overlap
ChIP
bronchial epithelial cell
ENCFF500SEA
274 bp overlap
ChIP
choroid plexus epithelial cell
ENCFF407YNR
277 bp overlap
ChIP
choroid plexus epithelial cell
ENCFF407YNR
205 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF038KTR
310 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF041CKA
387 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF046GNG
344 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF087VBI
269 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF092NXX
485 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF092NXX
485 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF149PUN
525 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF230SFD
272 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF230SFD
517 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF235CPK
384 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF245PVD
372 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF245PVD
477 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF255MAF
337 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF257LSY
875 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF258PHG
285 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF265AZL
357 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF267VHH
458 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277CZQ
661 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277YTN
344 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF282ONV
771 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF311KBD
728 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF327VLN
758 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF338KEP
828 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF354RKX
744 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF359BHR
409 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF373BUI
362 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF377YBQ
778 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF394MUG
311 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF403LNW
633 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF406ZHG
725 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
848 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF442YDO
401 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF457ZGY
344 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF458OBF
646 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF476NBQ
189 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF478RRB
363 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF483ZLP
792 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF514PNC
412 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF562MJV
422 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF595WAL
736 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF604JAV
381 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF628TCI
788 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF631JNO
776 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF641PIN
390 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF662EUG
421 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF677SUG
761 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696ASB
727 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696JOF
521 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696JOF
533 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF733NZH
828 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
810 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF749FBO
525 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF756TDJ
813 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF767LNC
779 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF784LWO
211 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
851 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
858 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812JWS
252 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
835 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF841TWE
408 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF851XUX
556 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF883PFA
369 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF896AZK
376 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF974AQC
744 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF455OQM
197 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF455OQM
197 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF677IZD
135 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF677IZD
226 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF947JAB
295 bp overlap
ChIP
epithelial cell of esophagus
ENCFF946GGT
305 bp overlap
ChIP
epithelial cell of esophagus
ENCFF946GGT
305 bp overlap
ChIP
epithelial cell of prostate
ENCFF086GTI
1169 bp overlap
ChIP
epithelial cell of proximal tubule
ENCFF763ZKS
256 bp overlap
ChIP
epithelial cell of proximal tubule
ENCFF763ZKS
239 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF045JBW
761 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF182PYY
296 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF421MEH
745 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF534UGM
476 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF534UGM
526 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF544GAS
394 bp overlap
ChIP
esophagus squamous epithelium
ENCFF037IYT
982 bp overlap
ChIP
esophagus squamous epithelium
ENCFF571ODZ
663 bp overlap
ChIP
esophagus squamous epithelium
ENCFF683HYK
299 bp overlap
ChIP
esophagus squamous epithelium
ENCFF683HYK
303 bp overlap
ChIP
esophagus squamous epithelium
ENCFF700BXI
722 bp overlap
ChIP
esophagus squamous epithelium
ENCFF797YPG
239 bp overlap
ChIP
esophagus squamous epithelium
ENCFF797YPG
298 bp overlap
ChIP
esophagus squamous epithelium
ENCFF884RED
131 bp overlap
ChIP
fibroblast of mammary gland
ENCFF109AZU
265 bp overlap
ChIP
fibroblast of pulmonary artery
ENCFF742RSV
297 bp overlap
ChIP
fibroblast of pulmonary artery
ENCFF742RSV
180 bp overlap
ChIP
fibroblast of the aortic adventitia
ENCFF639DMR
217 bp overlap
ChIP
fibroblast of the aortic adventitia
ENCFF639DMR
155 bp overlap
ChIP
fibroblast of villous mesenchyme
ENCFF345VQO
321 bp overlap
ChIP
fibroblast of villous mesenchyme
ENCFF345VQO
239 bp overlap
ChIP
gastroesophageal sphincter
ENCFF125ESZ
316 bp overlap
ChIP
gastroesophageal sphincter
ENCFF125ESZ
418 bp overlap
ChIP
gastroesophageal sphincter
ENCFF546QIK
441 bp overlap
ChIP
gastroesophageal sphincter
ENCFF546QIK
544 bp overlap
ChIP
gastroesophageal sphincter
ENCFF569YIT
437 bp overlap
ChIP
gastroesophageal sphincter
ENCFF569YIT
479 bp overlap
ChIP
gastroesophageal sphincter
ENCFF582GAX
255 bp overlap
ChIP
gastroesophageal sphincter
ENCFF582GAX
369 bp overlap
ChIP
gastroesophageal sphincter
ENCFF607YRA
922 bp overlap
ChIP
gastroesophageal sphincter
ENCFF918KPI
375 bp overlap
ChIP
left ventricle myocardium inferior
ENCFF161DPW
932 bp overlap
ChIP
lower lobe of left lung
ENCFF150FXW
434 bp overlap
ChIP
lower lobe of left lung
ENCFF906NCV
430 bp overlap
ChIP
lower lobe of left lung
ENCFF906NCV
461 bp overlap
ChIP
lower lobe of right lung
ENCFF092XHT
811 bp overlap
ChIP
mammary epithelial cell
ENCFF164SPU
234 bp overlap
ChIP
mammary epithelial cell
ENCFF164SPU
207 bp overlap
ChIP
mammary epithelial cell
ENCFF873ERE
271 bp overlap
ChIP
mammary epithelial cell
ENCFF873ERE
126 bp overlap
ChIP
mesothelial cell of epicardium
ENCFF427RFE
245 bp overlap
ChIP
mucosa of descending colon
ENCFF478SWS
411 bp overlap
ChIP
mucosa of descending colon
ENCFF478SWS
106 bp overlap
ChIP
nephron progenitor cell
ENCFF455DMI
354 bp overlap
ChIP
progenitor cell of endocrine pancreas
ENCFF492KHV
852 bp overlap
ChIP
retinal pigment epithelial cell
ENCFF810AAG
135 bp overlap
ChIP
retinal pigment epithelial cell
ENCFF810AAG
172 bp overlap
ChIP
right atrium auricular region
ENCFF471FFM
173 bp overlap
ChIP
right atrium auricular region
ENCFF690LBT
297 bp overlap
ChIP
right atrium auricular region
ENCFF696NTN
919 bp overlap
ChIP
skeletal muscle myoblast
ENCFF813BQI
148 bp overlap
ChIP
upper lobe of left lung
ENCFF108BCY
305 bp overlap
ChIP
upper lobe of left lung
ENCFF170ORD
215 bp overlap
ChIP
upper lobe of left lung
ENCFF277NLT
878 bp overlap
ChIP
upper lobe of left lung
ENCFF374MAK
740 bp overlap
ChIP
upper lobe of left lung
ENCFF645BXH
432 bp overlap
ChIP
upper lobe of left lung
ENCFF645BXH
441 bp overlap
ChIP
upper lobe of left lung
ENCFF654BFF
374 bp overlap
ChIP
upper lobe of left lung
ENCFF654BFF
471 bp overlap
ChIP
upper lobe of left lung
ENCFF962AIJ
814 bp overlap
ChIP
upper lobe of right lung
ENCFF065JCM
476 bp overlap
POLR2A
132 datasets
ChIP
endothelial cell of umbilical vein
ENCFF131DWO
201 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF303XUJ
284 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF303XUJ
461 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF467WJF
537 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF467WJF
537 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF432ZCY
279 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF617PTB
301 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF617PTB
301 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF759BBR
434 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF791ZXN
495 bp overlap
ChIP
esophagus squamous epithelium
ENCFF297FPP
391 bp overlap
ChIP
esophagus squamous epithelium
ENCFF708IOX
323 bp overlap
ChIP
gastroesophageal sphincter
ENCFF043KAM
135 bp overlap
ChIP
gastroesophageal sphincter
ENCFF070PCA
138 bp overlap
ChIP
gastroesophageal sphincter
ENCFF238INU
511 bp overlap
ChIP
gastroesophageal sphincter
ENCFF461UHJ
372 bp overlap
ChIP
upper lobe of left lung
ENCFF095BJW
371 bp overlap
ChIP
upper lobe of left lung
ENCFF199JUI
352 bp overlap
ChIP
upper lobe of left lung
ENCFF504HCM
445 bp overlap
ChIP
upper lobe of left lung
ENCFF603FIH
405 bp overlap
ChIP
upper lobe of left lung
ENCFF640VPA
512 bp overlap
No results match the current filters