chr2
:
166,127,010
–
166,128,203
1,193 bp
306 TFs
1 linked gene
This 1.2 kb open chromatin element is linked to SCN1A and is bound by 306 transcription factors.
Gene ↕
Expression
Dist. to TSS ↑
Distance ↕
Link type ↕
SCN1A
at TSS
At TSS
Proximity
Genome Browser
Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.
View limited to ±500 kb around this element. For the full data, please see the UCSC track linked below.
Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.
CTCF
953 datasets
ChIP
CD4-positive, alpha-beta T cell
ENCFF277LDE
406 bp overlap
ChIP
CD4-positive, alpha-beta T cell
ENCFF277LDE
205 bp overlap
ChIP
CD8-positive, alpha-beta T cell
ENCFF092PSD
358 bp overlap
ChIP
activated CD4-positive, alpha-beta T cell
ENCFF095PZX
256 bp overlap
ChIP
activated CD8-positive, alpha-beta T cell
ENCFF006MHW
385 bp overlap
ChIP
astrocyte of the cerebellum
ENCFF511OCS
326 bp overlap
ChIP
astrocyte of the spinal cord
ENCFF213GKL
220 bp overlap
ChIP
brain microvascular endothelial cell
ENCFF526VHE
256 bp overlap
ChIP
bronchial epithelial cell
ENCFF500SEA
173 bp overlap
ChIP
choroid plexus epithelial cell
ENCFF407YNR
143 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF038KTR
202 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF041CKA
270 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF041CKA
125 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF046GNG
152 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF087VBI
227 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF092NXX
122 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF149PUN
271 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF230SFD
188 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF235CPK
249 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF245PVD
267 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF245PVD
126 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF255MAF
137 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF257LSY
292 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF257LSY
155 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF258PHG
310 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF265AZL
227 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF267VHH
304 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277CZQ
307 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF277YTN
216 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF282ONV
274 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF311KBD
262 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF327VLN
297 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF338KEP
332 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF354RKX
288 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF359BHR
211 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF373BUI
212 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF377YBQ
342 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF394MUG
195 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF403LNW
283 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF406ZHG
345 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
342 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF433UFM
342 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF442YDO
242 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF457ZGY
212 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF458OBF
275 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF476NBQ
278 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF478RRB
239 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF483ZLP
219 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF514PNC
229 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF562MJV
194 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF595WAL
273 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF604JAV
162 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF628TCI
308 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF631JNO
266 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF641PIN
263 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF662EUG
299 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF677SUG
227 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696ASB
252 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF696JOF
345 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF733NZH
326 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF748IBN
354 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF749FBO
334 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF756TDJ
262 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF767LNC
245 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF784LWO
168 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812HQJ
268 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF812JWS
307 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF835ZSJ
280 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF841TWE
303 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF851XUX
267 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF883PFA
173 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF896AZK
208 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF974AQC
261 bp overlap
ChIP
dorsolateral prefrontal cortex
ENCFF974AQC
149 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF455OQM
132 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF677IZD
236 bp overlap
ChIP
endothelial cell of umbilical vein
ENCFF947JAB
327 bp overlap
ChIP
epithelial cell of esophagus
ENCFF946GGT
256 bp overlap
ChIP
epithelial cell of prostate
ENCFF086GTI
499 bp overlap
ChIP
epithelial cell of proximal tubule
ENCFF763ZKS
86 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF045JBW
205 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF182PYY
251 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF421MEH
263 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF534UGM
243 bp overlap
ChIP
esophagus muscularis mucosa
ENCFF544GAS
258 bp overlap
ChIP
esophagus squamous epithelium
ENCFF037IYT
204 bp overlap
ChIP
esophagus squamous epithelium
ENCFF683HYK
286 bp overlap
ChIP
esophagus squamous epithelium
ENCFF700BXI
263 bp overlap
ChIP
esophagus squamous epithelium
ENCFF797YPG
205 bp overlap
ChIP
esophagus squamous epithelium
ENCFF884RED
292 bp overlap
ChIP
fibroblast of mammary gland
ENCFF109AZU
234 bp overlap
ChIP
fibroblast of pulmonary artery
ENCFF742RSV
144 bp overlap
ChIP
fibroblast of the aortic adventitia
ENCFF639DMR
213 bp overlap
ChIP
fibroblast of villous mesenchyme
ENCFF345VQO
125 bp overlap
ChIP
gastroesophageal sphincter
ENCFF125ESZ
232 bp overlap
ChIP
gastroesophageal sphincter
ENCFF487MYN
291 bp overlap
ChIP
gastroesophageal sphincter
ENCFF546QIK
273 bp overlap
ChIP
gastroesophageal sphincter
ENCFF569YIT
260 bp overlap
ChIP
gastroesophageal sphincter
ENCFF582GAX
266 bp overlap
ChIP
gastroesophageal sphincter
ENCFF607YRA
263 bp overlap
ChIP
gastroesophageal sphincter
ENCFF918KPI
258 bp overlap
ChIP
left ventricle myocardium inferior
ENCFF161DPW
308 bp overlap
ChIP
lower lobe of left lung
ENCFF150FXW
224 bp overlap
ChIP
lower lobe of left lung
ENCFF906NCV
174 bp overlap
ChIP
lower lobe of right lung
ENCFF092XHT
264 bp overlap
ChIP
mammary epithelial cell
ENCFF873ERE
234 bp overlap
ChIP
mesothelial cell of epicardium
ENCFF427RFE
147 bp overlap
ChIP
mesothelial cell of epicardium
ENCFF427RFE
132 bp overlap
ChIP
nephron progenitor cell
ENCFF455DMI
190 bp overlap
ChIP
nephron progenitor cell
ENCFF455DMI
151 bp overlap
ChIP
progenitor cell of endocrine pancreas
ENCFF492KHV
260 bp overlap
ChIP
retinal pigment epithelial cell
ENCFF810AAG
233 bp overlap
ChIP
right atrium auricular region
ENCFF471FFM
337 bp overlap
ChIP
right atrium auricular region
ENCFF696NTN
324 bp overlap
ChIP
skeletal muscle myoblast
ENCFF813BQI
172 bp overlap
ChIP
upper lobe of left lung
ENCFF108BCY
273 bp overlap
ChIP
upper lobe of left lung
ENCFF170ORD
341 bp overlap
ChIP
upper lobe of left lung
ENCFF170ORD
142 bp overlap
ChIP
upper lobe of left lung
ENCFF277NLT
168 bp overlap
ChIP
upper lobe of left lung
ENCFF374MAK
291 bp overlap
ChIP
upper lobe of left lung
ENCFF645BXH
316 bp overlap
ChIP
upper lobe of left lung
ENCFF654BFF
128 bp overlap
ChIP
upper lobe of left lung
ENCFF962AIJ
309 bp overlap
ChIP
upper lobe of right lung
ENCFF065JCM
215 bp overlap
No results match the current filters