chr3 : 139,537,906 139,538,860
954 bp 246 TFs 1 linked gene
This 954 bp open chromatin element is linked to RBP1 and is bound by 246 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RBP1 881 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:139,532,906 – 139,543,860
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
246 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 954 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 213 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 347 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 164 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 268 bp overlap
Alx4 1 dataset
Motif DE_12h DE_12h-Alx4_MA0853.2 12 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 186 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 82 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 157 bp overlap
BRD4 11 datasets
ChIP HCT-116 GSE57628.BRD4.HCT-116 428 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 89 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 472 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 98 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 356 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 68 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 168 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 107 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 523 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 536 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 295 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CDK8 2 datasets
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 754 bp overlap
ChIP SW480 GSE53602.CDK8.SW480 622 bp overlap
CEBPB 2 datasets
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 387 bp overlap
ChIP IMR-90 ENCFF468UGY 63 bp overlap
CHD4 1 dataset
ChIP keratinocyte_CTR GSE139685.CHD4.keratinocyte_CTR 187 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CREM 3 datasets
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
ChIP GM12878 ENCFF391UGE 361 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 187 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 114 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
CTNNB1 2 datasets
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 511 bp overlap
ChIP hiPSC_TT-neg_D2 GSE132532.CTNNB1.hiPSC_TT-neg_D2 188 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 104 bp overlap
ChIP BLaER1 ENCFF031ISE 236 bp overlap
ChIP BLaER1 ENCFF274GAT 55 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 174 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 260 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 485 bp overlap
EGR1 1 dataset
ChIP GM12878 ENCSR000BMQ.EGR1.GM12878 180 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 400 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 108 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 631 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 568 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 637 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 135 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 196 bp overlap
ESR1 4 datasets
ChIP T-47D GSE148277.ESR1.T-47D 97 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 240 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 225 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 292 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 375 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV6 3 datasets
ChIP GM12878 ENCFF105ZMI 176 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 567 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 454 bp overlap
EZH2 2 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 57 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 128 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
FOSL1 1 dataset
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 377 bp overlap
FOSL2 1 dataset
ChIP HepG2 ENCFF548CXY 357 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 300 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 351 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 328 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 369 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 695 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 423 bp overlap
FOXM1 1 dataset
ChIP OE33 ERP013564.FOXM1.OE33 260 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GABPA 1 dataset
ChIP GM12878 ENCSR331HPA.GABPA.GM12878 127 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 705 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 745 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 734 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 750 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 954 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLIS2 2 datasets
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 352 bp overlap
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 149 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 313 bp overlap
HNF4A 4 datasets
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 548 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 491 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Hand1 2 datasets
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Hnf1A 4 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF824TGK 641 bp overlap
ChIP GM12878 ENCFF824TGK 221 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE107730.INO80.Hep-G2 279 bp overlap
ChIP Hep-G2 GSE97411.INO80.Hep-G2 279 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 589 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 619 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 117 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 218 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 828 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 493 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 954 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 514 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 371 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 321 bp overlap
ChIP GM12878 ENCFF667EJQ 183 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 365 bp overlap
JUND 1 dataset
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 310 bp overlap
KDM1A 6 datasets
ChIP HepG2 ENCFF240UWG 677 bp overlap
ChIP HepG2 ENCFF730KKG 325 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 233 bp overlap
ChIP SW480 GSE139925.KDM1A.SW480 266 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 263 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 261 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 157 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 849 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
ChIP ESO-26 GSE132680.KLF5.ESO-26 203 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 548 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 331 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 462 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 354 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAF 1 dataset
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
MAFA 2 datasets
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 356 bp overlap
ChIP H1 ENCFF914VQY 150 bp overlap
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 203 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 343 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 216 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MED1 3 datasets
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 82 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 285 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 267 bp overlap
MED26 1 dataset
ChIP HCT-116 GSE121355.MED26.HCT-116 342 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MXI1 3 datasets
ChIP SK-N-SH ENCFF746HVJ 214 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 192 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 64 bp overlap
MYC 3 datasets
ChIP NB69 GSE138295.MYC.NB69 815 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 255 bp overlap
ChIP SK-N-SH GSE138295.MYC.SK-N-SH 171 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 368 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 458 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 447 bp overlap
NFIA 2 datasets
ChIP Hep-G2 GSE97661.NFIA.Hep-G2 154 bp overlap
ChIP HepG2 ENCFF815HWK 391 bp overlap
NFIB 1 dataset
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
NFIC 5 datasets
Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 166 bp overlap
ChIP Hep-G2 GSE108514.NFIC.Hep-G2 306 bp overlap
ChIP Ishikawa ENCFF029AAD 381 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 255 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA1528.2 14 bp overlap
NIPBL 4 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 616 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 107 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 416 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 345 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NR1I3 2 datasets
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 280 bp overlap
NR2F2 4 datasets
ChIP liver ENCFF427MRU 299 bp overlap
ChIP liver ENCFF565JGD 204 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 334 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 251 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 120 bp overlap
ONECUT2 2 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 267 bp overlap
ChIP A-549 GSE102599.ONECUT2.A-549 369 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 857 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 217 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 191 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 248 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 88 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 387 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 427 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 141 bp overlap
PLAGL2 2 datasets
Motif DE_12h DE_12h-PLAGL2_MA1548.2 8 bp overlap
Motif DE_12h DE_12h-PLAGL2_MA1548.2 8 bp overlap
POLR2A 8 datasets
ChIP HCT116 ENCFF508RDJ 241 bp overlap
ChIP HCT116 ENCFF508RDJ 465 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 130 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 262 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 106 bp overlap
ChIP ovary ENCFF425PQK 58 bp overlap
ChIP sigmoid colon ENCFF754JQR 112 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 203 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 353 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 206 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 687 bp overlap
PROX1 2 datasets
ChIP SW480 GSE60390.PROX1.SW480 290 bp overlap
ChIP SW480 GSE60390.PROX1.SW480 241 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 260 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBM25 1 dataset
ChIP K-562 ENCSR791OZM.RBM25.K-562 293 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RCOR1 3 datasets
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 143 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 183 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 327 bp overlap
RELA 8 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 375 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 448 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 538 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 458 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 521 bp overlap
ChIP SW480_0h_TNFa GSE102796.RELA.SW480_0h_TNFa 139 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 692 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 72 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 66 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 543 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 111 bp overlap
RUNX1 2 datasets
ChIP NALM-6 GSE126300.RUNX1.NALM-6 246 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 237 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 305 bp overlap
ChIP liver ENCFF807CIA 133 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SETDB1 1 dataset
ChIP HEK293 ENCFF676PLV 222 bp overlap
SIN3A 1 dataset
ChIP HCT-116 ENCSR000BSG.SIN3A.HCT-116 249 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 773 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 642 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 746 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 954 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 151 bp overlap
SMARCA4 6 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 319 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 283 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 409 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 298 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 94 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 444 bp overlap
SMARCC1 5 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 377 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 636 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 389 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 244 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 348 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 467 bp overlap
SP1 1 dataset
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 423 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
SS18 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 192 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 443 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 271 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 360 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 140 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 445 bp overlap
SUPT6H 2 datasets
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 427 bp overlap
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 769 bp overlap
Stat5a 2 datasets
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 325 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCFF467DDW 471 bp overlap
TCF7 3 datasets
ChIP GM12878 ENCFF749DPM 148 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 377 bp overlap
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 436 bp overlap
TCF7L1 3 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 13 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 721 bp overlap
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 173 bp overlap
ChIP HCT-116_C16 GSE127960.TCF7L2.HCT-116_C16 406 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 427 bp overlap
ChIP HCT-116_WT GSE127960.TCF7L2.HCT-116_WT 495 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 547 bp overlap
ChIP HCT116 ENCFF038POZ 465 bp overlap
ChIP Hep-G2 ENCSR346BOD.TCF7L2.Hep-G2 224 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 846 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 52 bp overlap
TERF2 1 dataset
ChIP HEK293_HHV6-GFP GSE121985.TERF2.HEK293_HHV6-GFP 206 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
ChIP SK-N-SH ENCFF869XXQ 151 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 217 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
TP53 4 datasets
ChIP H9 GSE142050.TP53.H9 620 bp overlap
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 487 bp overlap
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 62 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 572 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 770 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 266 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZBTB33 3 datasets
ChIP HCT-116 ENCSR000BNY.ZBTB33.HCT-116 154 bp overlap
ChIP HCT116 ENCFF847AJN 277 bp overlap
ChIP HepG2 ENCFF778UKV 63 bp overlap
ZBTB7A 3 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 93 bp overlap
ChIP Ishikawa ENCFF191NFH 597 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 208 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 137 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 373 bp overlap
ZIC5 4 datasets
ChIP HCT-116_C16-CT289 GSE127960.ZIC5.HCT-116_C16-CT289 236 bp overlap
ChIP HCT-116_C18-CT289 GSE127960.ZIC5.HCT-116_C18-CT289 267 bp overlap
ChIP HCT-116_WT-CT289 GSE127960.ZIC5.HCT-116_WT-CT289 426 bp overlap
ChIP HCT-116_sc2 GSE127960.ZIC5.HCT-116_sc2 211 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 477 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 158 bp overlap
ZNF416 2 datasets
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF574 1 dataset
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 385 bp overlap
ChIP HepG2 ENCFF490FFQ 371 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 167 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 314 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap