chrX : 48,971,794 – 48,972,166
372 bp 186 TFs 1 linked gene
This 372 bp open chromatin element is linked to KCND1 and is bound by 186 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
KCND1 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:48,966,794 – 48,977,166
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
186 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 123 bp overlap
AGO1 6 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 372 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 372 bp overlap
ChIP HepG2 ENCFF358CXO 348 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 189 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 217 bp overlap
ChIP K562 ENCFF741BCI 247 bp overlap
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 372 bp overlap
ChIP HepG2 ENCFF773YDL 372 bp overlap
ChIP HepG2 ENCFF773YDL 372 bp overlap
AR 2 datasets
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 149 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 101 bp overlap
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 168 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 221 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 113 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 372 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 319 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 372 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 74 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 56 bp overlap
BCOR 3 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 332 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 372 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 58 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 231 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 156 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 114 bp overlap
BRD4 13 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 319 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 346 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 288 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 372 bp overlap
ChIP HeLa GSE151038.BRD4.HeLa 257 bp overlap
ChIP Hep-G2 GSE123097.BRD4.Hep-G2 372 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 292 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 300 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 372 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 368 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 372 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 372 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 132 bp overlap
BRD9 1 dataset
ChIP Mel270_DMSO GSE124720.BRD9.Mel270_DMSO 164 bp overlap
CHD2 4 datasets
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 152 bp overlap
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 137 bp overlap
ChIP K-562 ENCSR000EHD.CHD2.K-562 145 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 102 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 179 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 74 bp overlap
CSNK2A1 1 dataset
ChIP LNCaP_DHT GSE58607.CSNK2A1.LNCaP_DHT 72 bp overlap
CTCF 65 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 129 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 229 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 106 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 190 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 138 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 200 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 68 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 328 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 92 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 199 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 177 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 55 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 205 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 59 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 137 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 135 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 52 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 77 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 63 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 99 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 213 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 111 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 56 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 80 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 96 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 63 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 51 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 83 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 55 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 149 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 65 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 372 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 72 bp overlap
ChIP Panc1 ENCFF056JQX 102 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 229 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 87 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 167 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 99 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 109 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 112 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 137 bp overlap
ChIP chondrocyte ENCFF134ORZ 92 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 52 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 67 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 52 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 113 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 73 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 157 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 287 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 372 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 163 bp overlap
ChIP keratinocyte ENCFF046PBT 78 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 63 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 50 bp overlap
ChIP lung_left_upper-lobe ENCSR799TJD.CTCF.lung_left_upper-lobe 58 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 124 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 60 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 85 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 99 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 66 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 103 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 60 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 65 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 57 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 83 bp overlap
CTCFL 1 dataset
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 87 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF775HUO 111 bp overlap
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 147 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 303 bp overlap
EGR1 4 datasets
ChIP K-562 ENCSR211LTF.EGR1.K-562 212 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 182 bp overlap
ChIP K562 ENCFF895KGN 215 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 164 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 167 bp overlap
ELF1 3 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 372 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 232 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.ELF1.SK-N-MC_SHGFP_96H 175 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 320 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 357 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 372 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 372 bp overlap
ERG 4 datasets
ChIP ME-1 GSE46044.ERG.ME-1 189 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 227 bp overlap
ChIP aortic-endothelial-cell_D14 GSE139377.ERG.aortic-endothelial-cell_D14 167 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 178 bp overlap
ESR1 4 datasets
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 58 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 67 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 63 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 243 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 270 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 154 bp overlap
ETS1 6 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 161 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 217 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 161 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 161 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 281 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 217 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 372 bp overlap
FOSL2 1 dataset
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 112 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 185 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 188 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 137 bp overlap
GABPB1 1 dataset
ChIP K-562 ENCSR138YYY.GABPB1.K-562 91 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 270 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 120 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 94 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 190 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 341 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 372 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 372 bp overlap
GTF2I 2 datasets
ChIP K562 ENCFF539BYI 372 bp overlap
ChIP WTC11 ENCFF255XXZ 311 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 309 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 160 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 372 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 275 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 347 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 307 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 372 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 215 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 215 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 260 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 372 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 372 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 372 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 105 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 319 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 235 bp overlap
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 290 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 180 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 158 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 259 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 371 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 224 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 294 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KDM1A 9 datasets
ChIP H1 ENCFF696SGD 174 bp overlap
ChIP H1 ENCFF696SGD 219 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 187 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 190 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 187 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 185 bp overlap
ChIP SET-2_GSK GSE121424.KDM1A.SET-2_GSK 226 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 221 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 189 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 320 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 372 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 120 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 249 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 372 bp overlap
KLF5 1 dataset
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 300 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 267 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 372 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 150 bp overlap
MAZ 6 datasets
ChIP GM12878 ENCFF453CES 369 bp overlap
ChIP HEK293 ENCFF994GSG 372 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 372 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 372 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 327 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 102 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 71 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 68 bp overlap
MED26 2 datasets
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 154 bp overlap
ChIP U2OS_SHEP400 GSE73742.MED26.U2OS_SHEP400 232 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 331 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 67 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 208 bp overlap
MYC 1 dataset
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap
MYCN 6 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 216 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 197 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 254 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 111 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 283 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 101 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 155 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 158 bp overlap
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 120 bp overlap
NCOA1 1 dataset
ChIP K-562 ENCSR711SNW.NCOA1.K-562 303 bp overlap
NFATC1 2 datasets
ChIP GM12878 ENCFF023CAZ 372 bp overlap
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 341 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 112 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCFF965AKM 314 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 110 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 372 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 372 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 193 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF243FIR 179 bp overlap
ChIP liver ERP002306.ONECUT1.liver 115 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 283 bp overlap
ONECUT2 2 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 135 bp overlap
ChIP MKN74 GSE113045.ONECUT2.MKN74 166 bp overlap
PAF1 2 datasets
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 137 bp overlap
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 84 bp overlap
PATZ1 4 datasets
ChIP HEK293 ENCFF016MNJ 111 bp overlap
ChIP HEK293 GSE76494.PATZ1.HEK293 172 bp overlap
ChIP SK-N-SH ENCFF650NCN 319 bp overlap
ChIP SK-N-SH ENCFF650NCN 211 bp overlap
PBX3 1 dataset
ChIP A-549 ENCSR000BTN.PBX3.A-549 133 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 79 bp overlap
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 205 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 254 bp overlap
PDX1 4 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 204 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 131 bp overlap
ChIP islet ERP001456.PDX1.islet 152 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 154 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 274 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 340 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 148 bp overlap
PML 2 datasets
ChIP MCF-7 ENCSR000BUZ.PML.MCF-7 116 bp overlap
ChIP fibroblast GSE137084.PML.fibroblast 73 bp overlap
POLR2A 8 datasets
ChIP H1 ENCFF833NJP 246 bp overlap
ChIP SK-N-MC ENCFF088IVG 245 bp overlap
ChIP body of pancreas ENCFF675RCN 67 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 90 bp overlap
ChIP spleen ENCFF044PYR 133 bp overlap
ChIP spleen ENCFF446ZGT 372 bp overlap
ChIP spleen ENCFF706IUS 277 bp overlap
ChIP spleen ENCFF706IUS 186 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 372 bp overlap
ChIP K562 ENCFF648YPL 372 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 211 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 287 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 206 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 87 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 190 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 372 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 310 bp overlap
PTBP1 2 datasets
ChIP K-562 ENCSR948KMB.PTBP1.K-562 309 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 246 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 372 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 321 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 107 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 372 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 372 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 292 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 224 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 163 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 204 bp overlap
RELA 2 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 203 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 312 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 139 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 372 bp overlap
RUNX1 7 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 120 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 201 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 120 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 201 bp overlap
ChIP K-562 ENCSR588AKU.RUNX1.K-562 109 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 59 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 249 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 372 bp overlap
SIN3A 4 datasets
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 110 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 228 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 104 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 83 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000AUB.SIRT6.K-562 218 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 111 bp overlap
SMAD3 6 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 320 bp overlap
ChIP H69_4Veh GSE145250.SMAD3.H69_4Veh 177 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 143 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 139 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 82 bp overlap
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 166 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 362 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 115 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 57 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 183 bp overlap
SMARCA5 1 dataset
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 260 bp overlap
SMARCB1 4 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 235 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 263 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 269 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 98 bp overlap
SMARCC1 3 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 259 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 184 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 111 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 259 bp overlap
ChIP K562 ENCFF690CFF 78 bp overlap
SMC1 4 datasets
ChIP DKO GSE131606.SMC1.DKO 65 bp overlap
ChIP DKO GSE131606.SMC1.DKO 149 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 162 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 319 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 195 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 196 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 372 bp overlap
SP2 2 datasets
ChIP HEK293 ENCSR807LQP.SP2.HEK293 372 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 232 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 372 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 372 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 372 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 175 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 252 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 80 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 128 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 327 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_6aa GSE139053.SS18-SSX.fibroblast_6aa 247 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 202 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 295 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 354 bp overlap
STAT5A 3 datasets
ChIP GM12878 ENCFF267JUM 372 bp overlap
ChIP GM12878 ENCFF267JUM 172 bp overlap
ChIP GM12878 ENCSR000BQZ.STAT5A.GM12878 372 bp overlap
SUPT5H 4 datasets
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 342 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 372 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 372 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 139 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 177 bp overlap
TARDBP 4 datasets
ChIP GM12878 ENCSR016UEH.TARDBP.GM12878 99 bp overlap
ChIP GM12878 ENCSR016UEH.TARDBP.GM12878 110 bp overlap
ChIP K-562 ENCSR429XTR.TARDBP.K-562 127 bp overlap
ChIP K-562 GSE120104.TARDBP.K-562 120 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 112 bp overlap
ChIP K-562 GSE55306.TBP.K-562 202 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 110 bp overlap
TCF12 3 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 117 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 154 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 137 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 127 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 184 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 372 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 372 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 94 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 205 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 372 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 119 bp overlap
ZBTB10 1 dataset
ChIP HEK293 ENCSR004PLU.ZBTB10.HEK293 372 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 238 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 201 bp overlap
ZBTB7A 5 datasets
ChIP HEK293 ENCSR773REP.ZBTB7A.HEK293 213 bp overlap
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 112 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 336 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 372 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 372 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 210 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 372 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 310 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 264 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 311 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 281 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 172 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 115 bp overlap
ZMYM3 4 datasets
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 156 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 267 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 239 bp overlap
ChIP K562 ENCFF361LXT 350 bp overlap
ZNF121 1 dataset
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 249 bp overlap
ZNF143 2 datasets
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 186 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 232 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 228 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 77 bp overlap
ZNF281 1 dataset
ChIP HEK293 GSE76494.ZNF281.HEK293 197 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 78 bp overlap
ZNF324 1 dataset
ChIP HEK293 ENCSR768HOH.ZNF324.HEK293 268 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 372 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 205 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 298 bp overlap
ChIP HEK293 ENCFF184XEW 298 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 287 bp overlap
ZNF423 1 dataset
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 274 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 179 bp overlap
ZNF468 1 dataset
ChIP HEK293T GSE78099.ZNF468.HEK293T 210 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 129 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 138 bp overlap
ZNF605 1 dataset
ChIP HEK293T GSE78099.ZNF605.HEK293T 251 bp overlap
ZNF629 3 datasets
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 203 bp overlap
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 304 bp overlap
ChIP HepG2 ENCFF490FFQ 363 bp overlap
ZNF671 1 dataset
ChIP HEK293T GSE78099.ZNF671.HEK293T 225 bp overlap
ZNF76 2 datasets
ChIP HEK293 ENCFF374TCG 281 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 218 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 205 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 311 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 230 bp overlap
Huangfu Lab · Publications · Resources · Contact