chr12 : 97,131,381 – 97,132,173
792 bp 206 TFs 2 linked genes
This 792 bp open chromatin element is linked to ENSG00000258131 and NEDD1 and is bound by 206 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000258131 146.1 kb Distal Multiome
NEDD1 224.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:97,126,381 – 97,137,173
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
206 transcription factors
Source
Cell type
ARNT::HIF1A 1 dataset
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 698 bp overlap
ChIP H1 ENCFF399KAM 499 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 751 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 484 bp overlap
Ar 2 datasets
Motif DE_12h DE_12h-Ar_MA0007.4 16 bp overlap
Motif ES_0h ES_0h-Ar_MA0007.4 16 bp overlap
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
Arnt 1 dataset
Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap
Atoh1 1 dataset
Motif ES_0h ES_0h-Atoh1_MA1467.3 7 bp overlap
BCL11A 4 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 357 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 295 bp overlap
BCL6 1 dataset
Motif ES_0h ES_0h-BCL6_MA0463.3 13 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 200 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 206 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 266 bp overlap
BHLHE22 1 dataset
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 5 datasets
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 178 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 261 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 382 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 409 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 455 bp overlap
Bach1::Mafk 1 dataset
Motif ES_0h ES_0h-Bach1Mafk_MA0591.2 12 bp overlap
CDX1 2 datasets
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CDX2 2 datasets
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
Motif ES_0h ES_0h-CDX2_MA0465.3 8 bp overlap
CDX4 2 datasets
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap
CEBPA 6 datasets
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 111 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 205 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 367 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 241 bp overlap
CEBPB 8 datasets
Motif DE_12h DE_12h-CEBPB_MA0466.4 10 bp overlap
Motif ES_0h ES_0h-CEBPB_MA0466.4 10 bp overlap
ChIP H1 ENCFF871PTR 242 bp overlap
ChIP Ishikawa ENCFF010USJ 146 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 360 bp overlap
ChIP MCF-7 ENCFF772ZTQ 277 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 182 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 403 bp overlap
CEBPD 2 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CEBPE 2 datasets
Motif DE_12h DE_12h-CEBPE_MA0837.3 10 bp overlap
Motif ES_0h ES_0h-CEBPE_MA0837.3 10 bp overlap
CEBPG 2 datasets
Motif DE_12h DE_12h-CEBPG_MA0838.1 10 bp overlap
Motif ES_0h ES_0h-CEBPG_MA0838.1 10 bp overlap
CHD1 3 datasets
ChIP H1 ENCFF998XEK 510 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 178 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 207 bp overlap
CHD7 5 datasets
ChIP H1 ENCFF126NLU 412 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 153 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 370 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 216 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 622 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 221 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 362 bp overlap
CTCF 7 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 590 bp overlap
ChIP neural progenitor cell ENCFF420RBO 377 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 250 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 292 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 251 bp overlap
ChIP BLaER1 ENCFF274GAT 369 bp overlap
ChIP BLaER1 ENCFF335XTP 347 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
Ddit3::Cebpa 2 datasets
Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap
Motif ES_0h ES_0h-Ddit3Cebpa_MA0019.2 10 bp overlap
Dmbx1 1 dataset
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
Dmrt1 1 dataset
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
Dux 1 dataset
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 114 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 347 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 168 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif ES_0h ES_0h-ELK1HOXA1_MA1931.1 14 bp overlap
EP300 6 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP Ishikawa ENCFF364ZWT 417 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 244 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 328 bp overlap
ChIP hESC GSE17917.EP300.hESC 455 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 531 bp overlap
ERF::NHLH1 2 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 8 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 191 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 144 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 114 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 423 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 155 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 343 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 237 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 417 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 138 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ETV5::HOXA2 1 dataset
Motif ES_0h ES_0h-ETV5HOXA2_MA1948.2 12 bp overlap
EWSR1-FLI1 1 dataset
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 421 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 354 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 175 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 340 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 503 bp overlap
ChIP DE DE-GATA4-2 575 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 612 bp overlap
ChIP DE DE-GATA6-2 600 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 515 bp overlap
Motif ES_0h ES_0h-GATA6_MA1104.3 8 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
Gata3 1 dataset
Motif ES_0h ES_0h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 310 bp overlap
HES2 1 dataset
Motif ES_0h ES_0h-HES2_MA0616.3 9 bp overlap
HES5 1 dataset
Motif ES_0h ES_0h-HES5_MA0821.2 10 bp overlap
HEY1 1 dataset
Motif ES_0h ES_0h-HEY1_MA0823.1 10 bp overlap
HEY2 1 dataset
Motif ES_0h ES_0h-HEY2_MA0649.2 9 bp overlap
HIF1A 1 dataset
Motif ES_0h ES_0h-HIF1A_MA1106.2 6 bp overlap
HLF 2 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 397 bp overlap
HOXA3 1 dataset
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif ES_0h ES_0h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif ES_0h ES_0h-HOXA5_MA0158.2 8 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
HOXB2::ELK1 1 dataset
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC12 1 dataset
Motif ES_0h ES_0h-HOXC12_MA0906.2 10 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD11 1 dataset
Motif ES_0h ES_0h-HOXD11_MA0908.2 9 bp overlap
HOXD3 1 dataset
Motif ES_0h ES_0h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
HOXD9 2 datasets
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap
Hmga1 1 dataset
Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap
IKZF1 1 dataset
Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
ISL2 1 dataset
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 375 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 326 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 368 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 268 bp overlap
LEF1 2 datasets
ChIP hESC GSE64758.LEF1.hESC 304 bp overlap
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 221 bp overlap
MAFG::NFE2L1 1 dataset
Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 1 dataset
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MAX 8 datasets
Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 172 bp overlap
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF914VQY 123 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 101 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 204 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 489 bp overlap
ChIP WTC11 ENCFF223QFY 392 bp overlap
MAX::MYC 1 dataset
Motif ES_0h ES_0h-MAXMYC_MA0059.2 10 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 792 bp overlap
MEF2B 1 dataset
Motif ES_0h ES_0h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif ES_0h ES_0h-MEF2D_MA0773.1 12 bp overlap
MEIS1 2 datasets
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif ES_0h ES_0h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif ES_0h ES_0h-MEIS3_MA0775.2 7 bp overlap
MNT 1 dataset
Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap
MTF1 2 datasets
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
Motif ES_0h ES_0h-MTF1_MA0863.1 14 bp overlap
MXI1 2 datasets
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
ChIP neural cell ENCFF623HQN 482 bp overlap
MYC 3 datasets
Motif ES_0h ES_0h-MYC_MA0147.4 8 bp overlap
ChIP H1 ENCFF794ZJT 265 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 261 bp overlap
MYCN 1 dataset
Motif ES_0h ES_0h-MYCN_MA0104.5 8 bp overlap
Mafg 1 dataset
Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap
Mlxip 1 dataset
Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 288 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 673 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 285 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 773 bp overlap
ChIP hESC GSE18292.NANOG.hESC 424 bp overlap
ChIP hESC GSE20650.NANOG.hESC 335 bp overlap
NEUROG2 1 dataset
Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap
NHLH2 1 dataset
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NIPBL 5 datasets
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 354 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 268 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 272 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 307 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 283 bp overlap
NR3C1 5 datasets
Motif DE_12h DE_12h-NR3C1_MA0113.4 15 bp overlap
Motif ES_0h ES_0h-NR3C1_MA0113.4 15 bp overlap
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 223 bp overlap
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 175 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.NR3C1.Ishikawa_Dex_E2 166 bp overlap
NR3C2 2 datasets
Motif DE_12h DE_12h-NR3C2_MA0727.2 15 bp overlap
Motif ES_0h ES_0h-NR3C2_MA0727.2 15 bp overlap
Nanog 2 datasets
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
Motif ES_0h ES_0h-Nanog_MA2339.1 7 bp overlap
Neurod2 1 dataset
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Nkx3-1 1 dataset
Motif ES_0h ES_0h-Nkx3-1_MA0124.3 7 bp overlap
Npas2 1 dataset
Motif ES_0h ES_0h-Npas2_MA0626.2 8 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 3 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
ChIP WTC11 ENCFF634NAO 245 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PAX6 1 dataset
Motif ES_0h ES_0h-PAX6_MA0069.1 14 bp overlap
PBX3 2 datasets
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PITX1 2 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
PKNOX1 1 dataset
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 2 datasets
ChIP neural cell ENCFF604SPB 385 bp overlap
ChIP thyroid gland ENCFF979LRR 491 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 137 bp overlap
POU5F1 11 datasets
ChIP BG03 GSE21614.POU5F1.BG03 195 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 549 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 213 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 303 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 379 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 260 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 501 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 792 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 256 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap
PROX1 2 datasets
Motif DE_12h DE_12h-PROX1_MA0794.1 12 bp overlap
Motif ES_0h ES_0h-PROX1_MA0794.1 12 bp overlap
Pgr 2 datasets
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 214 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 226 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 579 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 279 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 461 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 179 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 271 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
REST 3 datasets
ChIP WA01 ENCSR000BHM.REST.WA01 211 bp overlap
ChIP neural ENCSR000BTV.REST.neural 430 bp overlap
ChIP neural cell ENCFF882LXX 505 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 116 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 130 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 177 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 239 bp overlap
SATB1 1 dataset
Motif ES_0h ES_0h-SATB1_MA1963.2 7 bp overlap
SIN3A 3 datasets
ChIP WA01 ENCSR000BIS.SIN3A.WA01 171 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 202 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 112 bp overlap
SMAD2 2 datasets
ChIP hESC GSE29422.SMAD2.hESC 155 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 397 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 389 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 436 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 289 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 421 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 434 bp overlap
SMAD3 7 datasets
ChIP BG03 GSE21614.SMAD3.BG03 285 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 249 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 346 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 138 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 224 bp overlap
ChIP hESC_DIFF_D0 GSE75297.SMAD3.hESC_DIFF_D0 257 bp overlap
ChIP hESC_DIFF_D1 GSE75297.SMAD3.hESC_DIFF_D1 267 bp overlap
SMARCA4 6 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 707 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 703 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 286 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 290 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 423 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 792 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 351 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 641 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 792 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 618 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 777 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 457 bp overlap
ChIP neural cell ENCFF795YGY 523 bp overlap
SOHLH2 1 dataset
Motif ES_0h ES_0h-SOHLH2_MA1560.2 8 bp overlap
SOX2 10 datasets
ChIP H9 GSE46837.SOX2.H9 379 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 778 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 180 bp overlap
ChIP hESC GSE69479.SOX2.hESC 332 bp overlap
ChIP hESC GSE18292.SOX2.hESC 241 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 327 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 358 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 266 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 291 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 352 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 447 bp overlap
SOX8 1 dataset
Motif ES_0h ES_0h-SOX8_MA0868.3 7 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 537 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 148 bp overlap
SPIC 1 dataset
Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap
SREBF1 1 dataset
Motif ES_0h ES_0h-SREBF1_MA0829.3 10 bp overlap
SRY 1 dataset
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
STAT1 1 dataset
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 145 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 149 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
Spz1 2 datasets
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Motif ES_0h ES_0h-Spz1_MA0111.1 11 bp overlap
Stat4 1 dataset
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5a::Stat5b 1 dataset
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 217 bp overlap
TAF1 2 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 107 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 440 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 203 bp overlap
ChIP hESC GSE122298.TBP.hESC 223 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 190 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 366 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 108 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 342 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 205 bp overlap
TCF3 2 datasets
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
ChIP NPC GSE154479.TCF3.NPC 418 bp overlap
TEAD1 2 datasets
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD2 1 dataset
Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 6 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 460 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 122 bp overlap
ChIP Ishikawa ENCFF772OTG 301 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 304 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 417 bp overlap
TFAP4 1 dataset
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 383 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 101 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 277 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 367 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 227 bp overlap
TRPS1 1 dataset
Motif ES_0h ES_0h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 210 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 116 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 119 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 434 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 351 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF274 2 datasets
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
Motif ES_0h ES_0h-ZNF274_MA1592.2 12 bp overlap
ZNF282 1 dataset
Motif ES_0h ES_0h-ZNF282_MA1154.2 15 bp overlap
ZNF331 1 dataset
ChIP GM23338 ENCFF410NSZ 225 bp overlap
ZNF343 1 dataset
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF418 1 dataset
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF440 1 dataset
ChIP HEK293T GSE78099.ZNF440.HEK293T 245 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 430 bp overlap
ZNF530 1 dataset
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF547 1 dataset
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF558 2 datasets
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF574 1 dataset
Motif ES_0h ES_0h-ZNF574_MA1982.2 14 bp overlap
ZNF582 2 datasets
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF766 1 dataset
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
ZNF768 2 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
ZNF8 3 datasets
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap
Motif ES_0h ES_0h-ZNF8_MA1718.1 20 bp overlap
Motif ES_0h ES_0h-ZNF8_MA1718.1 20 bp overlap
ZNF816 1 dataset
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
ZNF85 5 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Huangfu Lab · Publications · Resources · Contact