chr4 : 118,850,099 – 118,850,712
613 bp 189 TFs 4 linked genes
This 613 bp open chromatin element is linked to 4 target genes and is bound by 189 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SYNPO2 at TSS At TSS Proximity
SEC24D 14.2 kb Distal Multiome+HiCAR
METTL14 164.9 kb Distal Multiome
ENSG00000291201 258.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:118,845,099 – 118,855,712
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
189 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 120 bp overlap
ASH2L 3 datasets
ChIP GM12878 ENCFF655FLB 133 bp overlap
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 312 bp overlap
ChIP H1 ENCFF399KAM 502 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 492 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 613 bp overlap
ATF4 2 datasets
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Motif ES_0h ES_0h-ATF4_MA0833.3 10 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 156 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 149 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 91 bp overlap
BCL6B 2 datasets
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 165 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 222 bp overlap
BRD2 13 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 269 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 176 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 92 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 352 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 604 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 154 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 156 bp overlap
ChIP MM1-S GSE43743.BRD2.MM1-S 53 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 476 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 189 bp overlap
ChIP SUM159PT_DMSO GSE131097.BRD2.SUM159PT_DMSO 105 bp overlap
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 141 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 304 bp overlap
BRD4 42 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 238 bp overlap
ChIP CD4_Th1_BAY GSE62482.BRD4.CD4_Th1_BAY 136 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 454 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 57 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 215 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 67 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 97 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 194 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 257 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 613 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 280 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 379 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 206 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 91 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 91 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 439 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 194 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 193 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 241 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 455 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 313 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 247 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 613 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 86 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 384 bp overlap
ChIP SEM GSE83671.BRD4.SEM 165 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 219 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 86 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 266 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 271 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 289 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 232 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 259 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 346 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 362 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 78 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 213 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 199 bp overlap
ChIP T-cell_iBET-BD1 GSE138084.BRD4.T-cell_iBET-BD1 147 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 66 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 101 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 76 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 243 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE50622.CDK7.Jurkat 139 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 225 bp overlap
CDK9 5 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 322 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 177 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 183 bp overlap
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 269 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 332 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 67 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 246 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 90 bp overlap
ChIP H1 ENCFF126NLU 464 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 343 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 154 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 287 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 189 bp overlap
ChIP K562 ENCFF403WPG 290 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 241 bp overlap
CTCF 1 dataset
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 156 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 311 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
Dux 2 datasets
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 186 bp overlap
ELF1 8 datasets
ChIP GM12878 ENCFF692SMY 290 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 171 bp overlap
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 238 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 200 bp overlap
ChIP HepG2 ENCFF367ZWV 282 bp overlap
ChIP HepG2 ENCFF838BCU 159 bp overlap
ChIP K562 ENCFF886KFV 381 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 261 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 525 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 537 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 611 bp overlap
EOMES 2 datasets
Motif ES_0h ES_0h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 410 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 136 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 133 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 176 bp overlap
ESR1 1 dataset
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 190 bp overlap
ETS1 3 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 175 bp overlap
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 182 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 148 bp overlap
ETV5::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif ES_0h ES_0h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV6 2 datasets
ChIP GM12878 GSE97661.ETV6.GM12878 85 bp overlap
ChIP WTC11 ENCFF812SCD 401 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 107 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 72 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 221 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 251 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 154 bp overlap
ChIP DE DE-FOXA2-1 443 bp overlap
ChIP DE DE-FOXA2-2 326 bp overlap
FOXJ3 1 dataset
ChIP WTC11 ENCFF909BTK 405 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 65 bp overlap
FOXN3 3 datasets
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Motif ES_0h ES_0h-FOXN3_MA1489.1 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 454 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
Foxq1 2 datasets
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
GABPA 1 dataset
ChIP SK-N-SH ENCFF755TJJ 262 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 88 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 388 bp overlap
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 300 bp overlap
ChIP DE DE-GATA6-2 595 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 278 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 464 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 364 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 569 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 533 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 329 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 106 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 231 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 231 bp overlap
HDGF 1 dataset
ChIP GM12878 ENCFF653WYI 318 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HNF1B 1 dataset
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 83 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
HSF1 1 dataset
ChIP MO91 GSE45852.HSF1.MO91 173 bp overlap
IKZF1 3 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
ChIP GM12878 ENCFF753XDO 422 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 310 bp overlap
IKZF2 3 datasets
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
ChIP GM12878 ENCFF918AID 173 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 124 bp overlap
IRF1 14 datasets
ChIP AsPC-1 GSE141606.IRF1.AsPC-1 189 bp overlap
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 223 bp overlap
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 197 bp overlap
ChIP CD14_LPS GSE43036.IRF1.CD14_LPS 167 bp overlap
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 154 bp overlap
ChIP K-562 ENCSR854MCV.IRF1.K-562 449 bp overlap
ChIP K-562 ENCSR000EGL.IRF1.K-562 148 bp overlap
ChIP K-562 ENCSR000EGU.IRF1.K-562 75 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 380 bp overlap
ChIP K562 ENCFF277KTJ 189 bp overlap
ChIP K562 ENCFF277KTJ 130 bp overlap
ChIP PDAC GSE64557.IRF1.PDAC 333 bp overlap
ChIP PDAC GSE64557.IRF1.PDAC 93 bp overlap
ChIP monocyte_notreatment GSE100381.IRF1.monocyte_notreatment 95 bp overlap
IRF2 6 datasets
ChIP CD34_ADULT GSE70660.IRF2.CD34_ADULT 162 bp overlap
Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap
ChIP HepG2 ENCFF532TQV 66 bp overlap
ChIP K-562 ENCSR376WCJ.IRF2.K-562 260 bp overlap
ChIP K562 ENCFF248LJZ 144 bp overlap
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 461 bp overlap
IRF4 2 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 149 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 238 bp overlap
Irf1 2 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 292 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 563 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 82 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 542 bp overlap
KDM1A 2 datasets
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 266 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 239 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 613 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 573 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 184 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 56 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 171 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 121 bp overlap
LEF1 2 datasets
ChIP hESC GSE64758.LEF1.hESC 309 bp overlap
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 312 bp overlap
MAF 2 datasets
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 262 bp overlap
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 129 bp overlap
MAX 2 datasets
ChIP P493-6 GSE36354.MAX.P493-6 174 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 200 bp overlap
MAZ 2 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MED1 5 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 160 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 212 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 291 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 156 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 235 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 1 dataset
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 246 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 487 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 254 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 166 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 354 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 613 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 613 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 241 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 613 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 613 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 613 bp overlap
ChIP hESC GSE18292.NANOG.hESC 403 bp overlap
ChIP hESC GSE20650.NANOG.hESC 405 bp overlap
NBN 3 datasets
ChIP GM12878 ENCFF213ZNN 154 bp overlap
ChIP GM12878 ENCFF213ZNN 121 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 273 bp overlap
NFATC2 3 datasets
ChIP CD4 GSE116695.NFATC2.CD4 433 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 433 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 70 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 279 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 293 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 307 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 317 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 199 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 174 bp overlap
NR4A1 2 datasets
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
NR4A2 2 datasets
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
Motif ES_0h ES_0h-NR4A2_MA0160.3 8 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
Nr2e3 2 datasets
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 132 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
PLAGL2 2 datasets
Motif DE_12h DE_12h-PLAGL2_MA1548.2 8 bp overlap
Motif ES_0h ES_0h-PLAGL2_MA1548.2 8 bp overlap
POLR2A 8 datasets
ChIP GM12878 ENCFF263VRI 227 bp overlap
ChIP GM12878 ENCFF412KAE 117 bp overlap
ChIP GM12878 ENCFF521FXC 249 bp overlap
ChIP GM12891 ENCFF012SUT 255 bp overlap
ChIP GM18505 ENCFF311CYB 226 bp overlap
ChIP GM19099 ENCFF726IBN 222 bp overlap
ChIP H1 ENCFF566JSR 298 bp overlap
ChIP prostate gland ENCFF881OMH 229 bp overlap
POU5F1 11 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 297 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 613 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 551 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 336 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 290 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 281 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 613 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 309 bp overlap
PRDM1 2 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 388 bp overlap
ChIP H1 ENCFF905HFL 186 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 608 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 157 bp overlap
RELA 5 datasets
ChIP HAEC GSE89970.RELA.HAEC 98 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 112 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 175 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 85 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 183 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 496 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 292 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 130 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 233 bp overlap
SAP130 2 datasets
ChIP HepG2 ENCFF892EHZ 298 bp overlap
ChIP HepG2 ENCFF892EHZ 97 bp overlap
SAP30 2 datasets
ChIP WA01 ENCSR000ATR.SAP30.WA01 176 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 74 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 239 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 261 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 236 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 135 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 60 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 131 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 307 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE21614.SMAD3.BG03 255 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
ChIP H69_4Veh GSE145250.SMAD3.H69_4Veh 78 bp overlap
ChIP breast-cancer_triple-negative GSE130364.SMAD3.breast-cancer_triple-negative 112 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 167 bp overlap
SMARCA4 11 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 63 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 376 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 239 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 222 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 183 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 211 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 241 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 163 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 145 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 386 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 537 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 331 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 514 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 235 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 503 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 337 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 443 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 213 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 59 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 98 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 443 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 496 bp overlap
ChIP WTC11 ENCFF688PEU 501 bp overlap
SP4 3 datasets
ChIP H1 ENCFF473YOB 311 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 198 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 97 bp overlap
SPI1 6 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 232 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 243 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 232 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 181 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 115 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 169 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 306 bp overlap
SRY 1 dataset
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
STAT1 2 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT1::STAT2 3 datasets
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 200 bp overlap
STAT2 1 dataset
ChIP K-562 ENCSR000FBC.STAT2.K-562 102 bp overlap
STAT3 6 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 151 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 67 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 56 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 137 bp overlap
SUPT5H 2 datasets
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 193 bp overlap
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 137 bp overlap
Sox11 1 dataset
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5a 2 datasets
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
Stat5a::Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 258 bp overlap
TAF1 4 datasets
ChIP GM12878 ENCFF746UKX 132 bp overlap
ChIP GM12878 ENCSR000BGS.TAF1.GM12878 148 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
ChIP liver ENCFF610UQP 161 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 392 bp overlap
TBP 6 datasets
ChIP GM12878 ENCFF571OXR 227 bp overlap
ChIP hESC GSE122298.TBP.hESC 572 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 341 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 100 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 205 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 290 bp overlap
TBR1 1 dataset
Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TBX21 4 datasets
Motif ES_0h ES_0h-TBX21_MA0690.3 10 bp overlap
ChIP GM12878 ENCFF951HUW 404 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 297 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 168 bp overlap
TBX3 1 dataset
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 248 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 160 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 458 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 439 bp overlap
ChIP H1 ENCFF778PAX 205 bp overlap
TP53 3 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 594 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 303 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 316 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 241 bp overlap
Tbx6 1 dataset
Motif ES_0h ES_0h-Tbx6_MA1567.3 9 bp overlap
YY1 5 datasets
ChIP ALL GSE145549.YY1.ALL 245 bp overlap
ChIP H1 ENCFF524BTL 328 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 259 bp overlap
ChIP liver ENCFF400MBC 328 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 188 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 84 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 247 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 429 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 209 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 211 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZKSCAN8 1 dataset
ChIP WTC11 ENCFF666HNJ 51 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 233 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF136 1 dataset
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF189 4 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF207 2 datasets
ChIP GM12878 ENCSR117KWH.ZNF207.GM12878 300 bp overlap
ChIP WA09 GSE118632.ZNF207.WA09 378 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 461 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 144 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 130 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 313 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
ZSCAN16 1 dataset
Motif ES_0h ES_0h-ZSCAN16_MA2100.1 18 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 137 bp overlap
ZSCAN21 2 datasets
ChIP HEK293 ENCFF582WUP 358 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 336 bp overlap
Huangfu Lab · Publications · Resources · Contact