chr3 : 125,120,569 125,121,347
778 bp 178 TFs 4 linked genes
This 778 bp open chromatin element is linked to 4 target genes and is bound by 178 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
HEG1 65.0 kb Distal Multiome
SLC12A8 91.8 kb Distal Multiome
ITGB5 233.6 kb Distal Multiome
ZNF148 254.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:125,115,569 – 125,126,347
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
178 transcription factors
Source
Cell type
AHR 1 dataset
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 62 bp overlap
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 182 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 241 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 301 bp overlap
ASH2L 4 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 254 bp overlap
ChIP H1 ENCFF399KAM 567 bp overlap
ChIP H1 ENCFF399KAM 748 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 753 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP H1 ENCFF295GZO 484 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 348 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 321 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 218 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 103 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 201 bp overlap
BCLAF1 1 dataset
ChIP GM12878 ENCFF306JRM 185 bp overlap
BCOR 5 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 70 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 580 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 346 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 657 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 657 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 607 bp overlap
BRD3 1 dataset
ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 207 bp overlap
BRD4 20 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 83 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 78 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 71 bp overlap
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 318 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 123 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 150 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 338 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 168 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 420 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 445 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 230 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 522 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 311 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 440 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 194 bp overlap
ChIP hESC GSE33281.BRD4.hESC 212 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 747 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 659 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 778 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 441 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 298 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 216 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 127 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 201 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 375 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 300 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 778 bp overlap
CREB1 5 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 420 bp overlap
ChIP WTC11 ENCFF297VCI 371 bp overlap
ChIP WTC11 ENCFF297VCI 335 bp overlap
CREBBP 3 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 71 bp overlap
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 327 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 323 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 481 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 591 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 399 bp overlap
CTCF 11 datasets
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 99 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 303 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 155 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 167 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 556 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 333 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 172 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 335 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 274 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 430 bp overlap
ChIP neural cell ENCFF335ADI 505 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 217 bp overlap
ChIP BLaER1 ENCFF335XTP 231 bp overlap
ChIP BLaER1 ENCFF364PUR 344 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 502 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 356 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 201 bp overlap
ChIP GM12878 ENCFF813OXE 115 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 177 bp overlap
ChIP LCL GSE75503.EBF1.LCL 191 bp overlap
EED 3 datasets
ChIP GM12878 ENCFF266FYW 131 bp overlap
ChIP GM12878 ENCFF266FYW 457 bp overlap
ChIP ProEs GSE59087.EED.ProEs 299 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 203 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 177 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 295 bp overlap
ERG 3 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap
ChIP SEM GSE117864.ERG.SEM 220 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ESR1 4 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 489 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 452 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 631 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 257 bp overlap
ESRRA 2 datasets
ChIP WTC11 ENCFF591YCA 369 bp overlap
ChIP WTC11 ENCFF591YCA 425 bp overlap
ETS1 3 datasets
ChIP GM23338 ENCFF701IZH 377 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 470 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 159 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 5 datasets
ChIP ProEs GSE59087.EZH2.ProEs 176 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 292 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 265 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 319 bp overlap
ChIP hESC GSE113817.EZH2.hESC 309 bp overlap
Ebf4 2 datasets
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 274 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 308 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 228 bp overlap
ChIP WTC11 ENCFF338WGC 525 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 324 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 538 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 462 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 320 bp overlap
GATAD2B 3 datasets
ChIP GM12878 ENCFF781IAU 461 bp overlap
ChIP GM12878 ENCFF781IAU 537 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 412 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 387 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 658 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 195 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 517 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 321 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 291 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 171 bp overlap
HDAC6 1 dataset
ChIP WA01 ENCSR000ATQ.HDAC6.WA01 228 bp overlap
HIC2 3 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_72h DE_72h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HNF4A 1 dataset
ChIP hiPSC GSE104613.HNF4A.hiPSC 380 bp overlap
IKZF1 4 datasets
ChIP GM12878 ENCFF753XDO 310 bp overlap
ChIP GM12878 ENCFF824TGK 286 bp overlap
ChIP GM12878 ENCFF824TGK 641 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 419 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 109 bp overlap
ChIP GM12878 ENCFF918AID 106 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 366 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 342 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 455 bp overlap
JUN 8 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 331 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 545 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 287 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 394 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 350 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 489 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 302 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 321 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 182 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 136 bp overlap
KAT7 4 datasets
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 208 bp overlap
ChIP WTC11 ENCFF581TPB 327 bp overlap
ChIP WTC11 ENCFF581TPB 511 bp overlap
ChIP WTC11 ENCFF581TPB 320 bp overlap
KDM4A 5 datasets
ChIP H1 ENCFF078LED 701 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 482 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 281 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 322 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 423 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 185 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 248 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 300 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 299 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MED1 2 datasets
ChIP GM12878 GSE93080.MED1.GM12878 275 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 470 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 423 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 287 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 778 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 276 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 217 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94782.MYCN.Kelly 183 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 778 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 636 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 93 bp overlap
MYOD1 3 datasets
ChIP RH4 GSE83726.MYOD1.RH4 230 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 177 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 111 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
NANOG 7 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 649 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 315 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 277 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 255 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 264 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 229 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 251 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 205 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 201 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 171 bp overlap
NIPBL 3 datasets
ChIP GM12878 GSE93080.NIPBL.GM12878 157 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 249 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 225 bp overlap
NR1H4::RXRA 3 datasets
Motif DE_12h DE_12h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_72h DE_72h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif ES_0h ES_0h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 208 bp overlap
NR3C1 2 datasets
ChIP IMR-90 ERP007093.NR3C1.IMR-90 61 bp overlap
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
NR4A2::RXRA 3 datasets
Motif DE_12h DE_12h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_72h DE_72h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif ES_0h ES_0h-NR4A2RXRA_MA1147.2 13 bp overlap
OLIG2 4 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 508 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 599 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 263 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 531 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCFF503GOV 59 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 51 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 55 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 375 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 640 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 583 bp overlap
POLR2A 7 datasets
ChIP GM12891 ENCFF127ICP 511 bp overlap
ChIP GM12892 ENCFF245LYF 166 bp overlap
ChIP GM12892 ENCFF506PGQ 461 bp overlap
ChIP GM18505 ENCFF311CYB 472 bp overlap
ChIP GM23338 ENCFF450WCS 491 bp overlap
ChIP H1 ENCFF566JSR 631 bp overlap
ChIP spleen ENCFF446ZGT 268 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 407 bp overlap
POU5F1 8 datasets
ChIP BG03 GSE21614.POU5F1.BG03 415 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 392 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 650 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 301 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 761 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 536 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 352 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 207 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 427 bp overlap
RAD21 7 datasets
ChIP RH4 GSE83726.RAD21.RH4 241 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 184 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 127 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 174 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 485 bp overlap
ChIP neural cell ENCFF564MOT 505 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 229 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 671 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 674 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 98 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 87 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 266 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 297 bp overlap
REST 5 datasets
ChIP GM23338 ENCFF024TCL 265 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 109 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 138 bp overlap
ChIP neural ENCSR000BTV.REST.neural 299 bp overlap
ChIP neural cell ENCFF882LXX 505 bp overlap
RUNX1 3 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 153 bp overlap
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 291 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 153 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 166 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 237 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 606 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 511 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 521 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 78 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 292 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 441 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 206 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 179 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 128 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 374 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 758 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 428 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 739 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 435 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 736 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 467 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 575 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 357 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE21614.SMAD3.BG03 207 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 372 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 336 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 302 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 244 bp overlap
SMAD4 2 datasets
ChIP endoderm GSE29422.SMAD4.endoderm 165 bp overlap
ChIP hESC GSE29422.SMAD4.hESC 205 bp overlap
SMARCA4 9 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 493 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 296 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 322 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 397 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 211 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 725 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 702 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 102 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 460 bp overlap
SMARCB1 3 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 194 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 490 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 667 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 402 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 212 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 536 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 596 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 261 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 290 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 455 bp overlap
SOX2 7 datasets
ChIP H9 GSE46837.SOX2.H9 299 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 778 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 564 bp overlap
ChIP hESC GSE69479.SOX2.hESC 236 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 310 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 395 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 221 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 292 bp overlap
ChIP WTC11 ENCFF688PEU 501 bp overlap
SP4 2 datasets
ChIP H1 ENCFF473YOB 590 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 143 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 211 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 515 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 174 bp overlap
STAT6 1 dataset
ChIP WTC11 ENCFF271RMR 457 bp overlap
SUZ12 2 datasets
ChIP K-562 ENCSR000AUC.SUZ12.K-562 175 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 305 bp overlap
Sox6 3 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 3 datasets
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 289 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 200 bp overlap
TAF2 1 dataset
ChIP hESC GSE17917.TAF2.hESC 125 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 282 bp overlap
TBP 1 dataset
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 254 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 64 bp overlap
TCF12 4 datasets
ChIP GM12878 ENCFF506WWB 154 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 136 bp overlap
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 184 bp overlap
TCF3 3 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 156 bp overlap
ChIP NPC GSE154479.TCF3.NPC 516 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 505 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 219 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 241 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 778 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 441 bp overlap
THAP1 3 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif DE_72h DE_72h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TP53 4 datasets
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 233 bp overlap
ChIP GM00011 GSE55727.TP53.GM00011 207 bp overlap
ChIP H9 GSE39912.TP53.H9 221 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 220 bp overlap
TRIM28 4 datasets
ChIP AF22 GSE84259.TRIM28.AF22 273 bp overlap
ChIP WA01 GSE78099.TRIM28.WA01 117 bp overlap
ChIP WIBR3 GSE84382.TRIM28.WIBR3 214 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 377 bp overlap
YY1 7 datasets
ChIP GM12878 ENCFF908JTL 170 bp overlap
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 85 bp overlap
ChIP GM12892 ENCFF802MHJ 235 bp overlap
ChIP GM12892 ENCSR000BLT.YY1.GM12892 147 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 209 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 302 bp overlap
ZBTB24 3 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_72h DE_72h-ZBTB24_MA2330.1 10 bp overlap
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZBTB33 4 datasets
ChIP GM12878 ENCFF024ZOE 261 bp overlap
ChIP GM12878 ENCFF818EFA 174 bp overlap
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 469 bp overlap
ChIP SK-N-SH ENCSR000BTS.ZBTB33.SK-N-SH 122 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 485 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 471 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 407 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 195 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 405 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 582 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 461 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF324 1 dataset
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
ZNF331 2 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 263 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 258 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 60 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zfp335 3 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 3 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 3 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Zic3 3 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap