chr13 : 22,040,690 22,041,426
736 bp 169 TFs 1 linked gene
This 736 bp open chromatin element is linked to LINC00540 and is bound by 169 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC00540 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:22,035,690 – 22,046,426
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
169 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 193 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 264 bp overlap
ARNT 1 dataset
ChIP T-47D GSE130989.ARNT.T-47D 251 bp overlap
ARRB1 1 dataset
ChIP LNCaP-C4-2 GSE55615.ARRB1.LNCaP-C4-2 133 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 567 bp overlap
ATF1 2 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 509 bp overlap
ChIP K562 ENCFF817JQF 691 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 327 bp overlap
Ahr::Arnt 3 datasets
Motif DE_36h DE_36h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_48h DE_48h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 355 bp overlap
BRD2 9 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 355 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 470 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 566 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 352 bp overlap
ChIP K-562 GSE140325.BRD2.K-562 198 bp overlap
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 588 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 252 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 244 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 217 bp overlap
BRD3 5 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 627 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 297 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 342 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 344 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 316 bp overlap
BRD4 20 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 418 bp overlap
ChIP HeLa GSE51633.BRD4.HeLa 161 bp overlap
ChIP K-562 GSE140325.BRD4.K-562 104 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 576 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 546 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 436 bp overlap
ChIP K-562_iBET-BD1 GSE138084.BRD4.K-562_iBET-BD1 379 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 327 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 454 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 457 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 539 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 173 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 201 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 201 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 344 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 276 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 408 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 204 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 231 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 114 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 390 bp overlap
CEBPA 3 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 272 bp overlap
ChIP T-47D_siCEBPA GSE132649.CEBPA.T-47D_siCEBPA 225 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 320 bp overlap
CEBPB 3 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 198 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 136 bp overlap
ChIP K562 ENCFF584CTB 469 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
CREB1 1 dataset
ChIP MDA-MB-134-VI GSE109103.CREB1.MDA-MB-134-VI 191 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 531 bp overlap
ChIP K562 ENCFF403WPG 545 bp overlap
CTCF 17 datasets
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 290 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 409 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 114 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 126 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 268 bp overlap
ChIP GM13976 ENCFF896BYT 161 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 405 bp overlap
ChIP H9 ENCFF152GTF 456 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 195 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 138 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 210 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 321 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 412 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 359 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 164 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 121 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 485 bp overlap
E2F6 3 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 394 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 216 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 217 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 291 bp overlap
ChIP K562 ENCFF622HMZ 533 bp overlap
EHF 7 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap
Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap
ELF1 12 datasets
ChIP A-549 GSE122203.ELF1.A-549 243 bp overlap
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR975SSR.ELF1.K-562 264 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 214 bp overlap
ChIP K-562 ENCSR502OEK.ELF1.K-562 277 bp overlap
ChIP K562 ENCFF457KVR 485 bp overlap
ChIP K562 ENCFF457KVR 465 bp overlap
ChIP K562 ENCFF496AKI 277 bp overlap
ChIP K562 ENCFF886KFV 552 bp overlap
ELF3 4 datasets
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap
ELK1::SREBF2 3 datasets
Motif DE_12h DE_12h-ELK1SREBF2_MA1933.2 15 bp overlap
Motif DE_36h DE_36h-ELK1SREBF2_MA1933.2 15 bp overlap
Motif DE_60h DE_60h-ELK1SREBF2_MA1933.2 15 bp overlap
ELK4 4 datasets
Motif DE_24h DE_24h-ELK4_MA0076.3 9 bp overlap
Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
Motif DE_60h DE_60h-ELK4_MA0076.3 9 bp overlap
EP300 1 dataset
ChIP T-47D ENCSR000BLM.EP300.T-47D 280 bp overlap
ERF::FOXI1 4 datasets
Motif DE_24h DE_24h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_36h DE_36h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_48h DE_48h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 4 datasets
Motif DE_24h DE_24h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_36h DE_36h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_48h DE_48h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_60h DE_60h-ERFFOXO1_MA1936.2 12 bp overlap
ERF::SREBF2 3 datasets
Motif DE_12h DE_12h-ERFSREBF2_MA1939.2 16 bp overlap
Motif DE_36h DE_36h-ERFSREBF2_MA1939.2 16 bp overlap
Motif DE_60h DE_60h-ERFSREBF2_MA1939.2 16 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 247 bp overlap
ESR1 17 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 273 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 371 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 267 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 421 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 351 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 323 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 497 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 489 bp overlap
ChIP T-47D_JC4727 GSE126004.ESR1.T-47D_JC4727 260 bp overlap
ChIP T-47D_JC4730 GSE126004.ESR1.T-47D_JC4730 232 bp overlap
ChIP T-47D_JC4732 GSE126004.ESR1.T-47D_JC4732 195 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 626 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 552 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 411 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 310 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 270 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 307 bp overlap
ESRRA 1 dataset
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 247 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 152 bp overlap
ETV1 4 datasets
Motif DE_24h DE_24h-ETV1_MA0761.3 9 bp overlap
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
Motif DE_60h DE_60h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 4 datasets
Motif DE_24h DE_24h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::DRGX 3 datasets
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_36h DE_36h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_60h DE_60h-ETV5DRGX_MA1944.2 12 bp overlap
ETV6 3 datasets
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
Motif DE_36h DE_36h-ETV6_MA0645.2 9 bp overlap
Motif DE_60h DE_60h-ETV6_MA0645.2 9 bp overlap
ETV7 3 datasets
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap
Motif DE_60h DE_60h-ETV7_MA1708.2 9 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 279 bp overlap
Erg 4 datasets
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap
FOXA1 2 datasets
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 190 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 116 bp overlap
FOXJ2::ELF1 4 datasets
Motif DE_24h DE_24h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_36h DE_36h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_48h DE_48h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_60h DE_60h-FOXJ2ELF1_MA1952.2 11 bp overlap
GABPA 7 datasets
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap
ChIP K-562 ENCSR290MUH.GABPA.K-562 296 bp overlap
ChIP K-562 ENCSR000BLO.GABPA.K-562 157 bp overlap
ChIP K562 ENCFF139LXS 676 bp overlap
GABPB1 3 datasets
ChIP K-562 ENCSR138YYY.GABPB1.K-562 342 bp overlap
ChIP K562 ENCFF015GDS 551 bp overlap
ChIP K562 ENCFF015GDS 482 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 119 bp overlap
GCM1 2 datasets
Motif DE_48h DE_48h-GCM1_MA0646.2 10 bp overlap
Motif DE_60h DE_60h-GCM1_MA0646.2 10 bp overlap
GRHL2 2 datasets
ChIP T-47D GSE99680.GRHL2.T-47D 570 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 84 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 265 bp overlap
HDAC1 5 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 585 bp overlap
ChIP K-562 ENCSR000AQF.HDAC1.K-562 466 bp overlap
ChIP K562 ENCFF872AQB 127 bp overlap
ChIP K562 ENCFF872AQB 394 bp overlap
ChIP K562 ENCFF968WBH 521 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 645 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 287 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 555 bp overlap
HINFP 2 datasets
ChIP K-562 ENCSR619GFP.HINFP.K-562 333 bp overlap
ChIP K562 ENCFF361QXJ 174 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 254 bp overlap
HNRNPLL 3 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 172 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 173 bp overlap
HOXB2::ELK1 3 datasets
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif DE_36h DE_36h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif DE_60h DE_60h-HOXB2ELK1_MA1957.1 14 bp overlap
Ikzf3 4 datasets
Motif DE_24h DE_24h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 315 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 353 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 328 bp overlap
JUND 2 datasets
ChIP K562 ENCFF336RCR 461 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 153 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 667 bp overlap
ChIP H1 ENCFF078LED 467 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 661 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 306 bp overlap
KDM5B 3 datasets
ChIP K-562 ENCSR000AQA.KDM5B.K-562 296 bp overlap
ChIP K562 ENCFF049WWX 423 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 149 bp overlap
KLF1 4 datasets
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
Motif DE_48h DE_48h-KLF1_MA0493.3 8 bp overlap
Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap
ChIP K-562 ENCSR550HCT.KLF1.K-562 283 bp overlap
KLF10 3 datasets
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
Motif DE_48h DE_48h-KLF10_MA1511.2 9 bp overlap
Motif DE_60h DE_60h-KLF10_MA1511.2 9 bp overlap
KLF11 3 datasets
Motif DE_36h DE_36h-KLF11_MA1512.2 10 bp overlap
Motif DE_48h DE_48h-KLF11_MA1512.2 10 bp overlap
Motif DE_60h DE_60h-KLF11_MA1512.2 10 bp overlap
KLF12 3 datasets
Motif DE_36h DE_36h-KLF12_MA0742.2 9 bp overlap
Motif DE_48h DE_48h-KLF12_MA0742.2 9 bp overlap
Motif DE_60h DE_60h-KLF12_MA0742.2 9 bp overlap
KLF13 4 datasets
Motif DE_36h DE_36h-KLF13_MA0657.2 17 bp overlap
Motif DE_48h DE_48h-KLF13_MA0657.2 17 bp overlap
Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap
ChIP K-562 ENCSR608HVP.KLF13.K-562 259 bp overlap
KLF14 3 datasets
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
Motif DE_48h DE_48h-KLF14_MA0740.2 9 bp overlap
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
KLF16 3 datasets
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
Motif DE_48h DE_48h-KLF16_MA0741.1 11 bp overlap
Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap
KLF2 3 datasets
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
Motif DE_48h DE_48h-KLF2_MA1515.2 8 bp overlap
Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap
KLF3 3 datasets
Motif DE_36h DE_36h-KLF3_MA1516.2 10 bp overlap
Motif DE_48h DE_48h-KLF3_MA1516.2 10 bp overlap
Motif DE_60h DE_60h-KLF3_MA1516.2 10 bp overlap
KLF4 3 datasets
ChIP WA09 GSE105028.KLF4.WA09 189 bp overlap
ChIP WIBR3 GSE130417.KLF4.WIBR3 258 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 263 bp overlap
KLF5 4 datasets
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 343 bp overlap
KLF6 3 datasets
Motif DE_36h DE_36h-KLF6_MA1517.2 9 bp overlap
Motif DE_48h DE_48h-KLF6_MA1517.2 9 bp overlap
Motif DE_60h DE_60h-KLF6_MA1517.2 9 bp overlap
KLF7 3 datasets
Motif DE_36h DE_36h-KLF7_MA1959.2 8 bp overlap
Motif DE_48h DE_48h-KLF7_MA1959.2 8 bp overlap
Motif DE_60h DE_60h-KLF7_MA1959.2 8 bp overlap
KLF9 4 datasets
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 88 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 530 bp overlap
ChIP K562 ENCFF320EQC 271 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 173 bp overlap
MAX 6 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 165 bp overlap
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 562 bp overlap
ChIP K562 ENCFF110LJS 329 bp overlap
ChIP K562 ENCFF524IJO 386 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 211 bp overlap
MAZ 2 datasets
ChIP K562 ENCFF809XHP 531 bp overlap
ChIP K562 ENCFF809XHP 450 bp overlap
MGA 4 datasets
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 352 bp overlap
ChIP A-549_empty GSE112188.MGA.A-549_empty 279 bp overlap
ChIP K-562 ENCSR710WLO.MGA.K-562 410 bp overlap
ChIP K562 ENCFF140CEX 545 bp overlap
MNT 7 datasets
ChIP K-562 ENCSR390VGH.MNT.K-562 515 bp overlap
ChIP K-562 ENCSR979QYJ.MNT.K-562 434 bp overlap
ChIP K-562 ENCSR512NLO.MNT.K-562 430 bp overlap
ChIP K562 ENCFF342DNS 617 bp overlap
ChIP K562 ENCFF342DNS 439 bp overlap
ChIP K562 ENCFF450LDL 531 bp overlap
ChIP K562 ENCFF820IGH 628 bp overlap
MTA3 4 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 429 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 243 bp overlap
ChIP K562 ENCFF289UFB 526 bp overlap
ChIP K562 ENCFF289UFB 511 bp overlap
MYC 2 datasets
ChIP GP5D GSE51234.MYC.GP5D 540 bp overlap
ChIP K-562 ENCSR000EGJ.MYC.K-562 342 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 517 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 185 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 321 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 544 bp overlap
NKX2-3 1 dataset
Motif DE_60h DE_60h-NKX2-3_MA0672.2 8 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 736 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 573 bp overlap
ChIP K562 ENCFF221HJH 409 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 140 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 451 bp overlap
PGR 2 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 245 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 273 bp overlap
PHF8 4 datasets
ChIP H1 ENCFF427UFV 581 bp overlap
ChIP K-562 ENCSR000AQH.PHF8.K-562 512 bp overlap
ChIP K562 ENCFF217UCA 381 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 256 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 231 bp overlap
POLR2A 12 datasets
ChIP A549 ENCFF748RAW 311 bp overlap
ChIP GM23338 ENCFF450WCS 310 bp overlap
ChIP H1 ENCFF566JSR 394 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF833NJP 279 bp overlap
ChIP K562 ENCFF215CWW 280 bp overlap
ChIP K562 ENCFF757TUO 437 bp overlap
ChIP body of pancreas ENCFF501FEC 437 bp overlap
ChIP body of pancreas ENCFF675RCN 181 bp overlap
ChIP body of pancreas ENCFF727UBE 437 bp overlap
ChIP spleen ENCFF446ZGT 260 bp overlap
ChIP spleen ENCFF446ZGT 476 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 483 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 684 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 221 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 376 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 324 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 384 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 265 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 576 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 102 bp overlap
Prdm14 2 datasets
Motif DE_48h DE_48h-Prdm14_MA1998.2 8 bp overlap
Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap
RAD21 3 datasets
ChIP GP5D GSE51234.RAD21.GP5D 428 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 593 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 176 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 671 bp overlap
ChIP K-562 ENCSR000AQI.RBBP5.K-562 475 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 426 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 282 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 266 bp overlap
ChIP K562 ENCFF967GRF 734 bp overlap
RBPJ 3 datasets
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RELA 5 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 232 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 248 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 259 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 264 bp overlap
ChIP Huh-7_IL1 GSE89212.RELA.Huh-7_IL1 257 bp overlap
REST 3 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 263 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 257 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 288 bp overlap
RFX1 1 dataset
ChIP K-562 ENCSR968GIB.RFX1.K-562 247 bp overlap
RNF2 2 datasets
ChIP K562 ENCFF653BQJ 611 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 358 bp overlap
RUNX1 2 datasets
ChIP AML GSE111821.RUNX1.AML 211 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 247 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 398 bp overlap
SAP30 4 datasets
ChIP H1 ENCFF149IOE 451 bp overlap
ChIP K-562 ENCSR000AQJ.SAP30.K-562 405 bp overlap
ChIP K562 ENCFF652WJB 485 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 556 bp overlap
SIN3A 3 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 244 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 350 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 266 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 360 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 345 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 260 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 257 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 548 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 227 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 526 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 409 bp overlap
SOX2 2 datasets
ChIP hiPSC GSE56567.SOX2.hiPSC 241 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 154 bp overlap
SP1 3 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 225 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 253 bp overlap
SP3 3 datasets
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
Motif DE_48h DE_48h-SP3_MA0746.3 11 bp overlap
Motif DE_60h DE_60h-SP3_MA0746.3 11 bp overlap
SP4 3 datasets
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP8 3 datasets
Motif DE_36h DE_36h-SP8_MA0747.2 11 bp overlap
Motif DE_48h DE_48h-SP8_MA0747.2 11 bp overlap
Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap
SP9 3 datasets
Motif DE_36h DE_36h-SP9_MA1564.2 10 bp overlap
Motif DE_48h DE_48h-SP9_MA1564.2 10 bp overlap
Motif DE_60h DE_60h-SP9_MA1564.2 10 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 394 bp overlap
SPI1 3 datasets
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 140 bp overlap
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 294 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
SPIB 3 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 495 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 481 bp overlap
STAT3 11 datasets
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 356 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 284 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 285 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 432 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 427 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 403 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 360 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 495 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 549 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 455 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 540 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 282 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 237 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 398 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 337 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 167 bp overlap
TBP 13 datasets
ChIP H1 ENCFF859IIO 199 bp overlap
ChIP K-562 GSE55306.TBP.K-562 231 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 197 bp overlap
ChIP K562 ENCFF901UYM 381 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 331 bp overlap
ChIP hESC GSE122298.TBP.hESC 371 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 318 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 168 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 270 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 322 bp overlap
ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 227 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 372 bp overlap
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 508 bp overlap
TEAD4 3 datasets
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 208 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 368 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 424 bp overlap
THRB 4 datasets
Motif DE_24h DE_24h-THRB_MA1575.2 17 bp overlap
Motif DE_36h DE_36h-THRB_MA1575.2 17 bp overlap
Motif DE_48h DE_48h-THRB_MA1575.2 17 bp overlap
Motif DE_60h DE_60h-THRB_MA1575.2 17 bp overlap
TP53 3 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 305 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 287 bp overlap
TP63 2 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 179 bp overlap
ChIP breast-organoid GSE113909.TP63.breast-organoid 194 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 301 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 378 bp overlap
Thap11 4 datasets
Motif DE_24h DE_24h-Thap11_MA1573.2 14 bp overlap
Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap
Motif DE_48h DE_48h-Thap11_MA1573.2 14 bp overlap
Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 219 bp overlap
VEZF1 3 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 197 bp overlap
ChIP K562 ENCFF053XDV 162 bp overlap
ChIP K562 ENCFF053XDV 638 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 141 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 478 bp overlap
ZBTB11 3 datasets
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_60h DE_60h-ZBTB11_MA2329.1 9 bp overlap
ZBTB5 2 datasets
ChIP K-562 ENCSR786OQY.ZBTB5.K-562 374 bp overlap
ChIP K562 ENCFF856PUG 385 bp overlap
ZBTB7A 3 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_60h DE_60h-ZBTB7A_MA0750.3 9 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 285 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 363 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 233 bp overlap
ZFP91 2 datasets
ChIP K-562 ENCSR898XMH.ZFP91.K-562 498 bp overlap
ChIP K562 ENCFF501CDP 263 bp overlap
ZKSCAN5 3 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 169 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 246 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 490 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 222 bp overlap
ZNF667 3 datasets
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
ZNF682 3 datasets
Motif DE_36h DE_36h-ZNF682_MA1599.2 11 bp overlap
Motif DE_48h DE_48h-ZNF682_MA1599.2 11 bp overlap
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif DE_60h DE_60h-ZNF684_MA1600.2 14 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
ZNF816 4 datasets
Motif DE_24h DE_24h-ZNF816_MA1719.2 15 bp overlap
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
Motif DE_48h DE_48h-ZNF816_MA1719.2 15 bp overlap
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Zfp335 4 datasets
Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap