chr1:156,181,487–156,182,119

chr1 : 156,181,487 – 156,182,119

632 bp 145 TFs 18 linked genes

This 632 bp open chromatin element is linked to 18 target genes and is bound by 145 transcription factors.

Linked Genes

18 genes

Gene	Expression	Dist. to TSS	Distance	Link type
SLC25A44		12.3 kb	Distal	Multiome
PMF1		31.2 kb	Distal	Multiome
SEMA4A		31.7 kb	Distal	Multiome
LMNA		67.1 kb	Distal	Multiome
MEX3A		99.3 kb	Distal	Multiome
SMG5		101.1 kb	Distal	Multiome
GLMP		113.9 kb	Distal	Multiome
RAB25		120.6 kb	Distal	Multiome
LAMTOR2		126.9 kb	Distal	Multiome
UBQLN4		128.0 kb	Distal	Multiome
CCT3		156.5 kb	Distal	Multiome
TSACC		156.6 kb	Distal	Multiome
SSR2		160.8 kb	Distal	Multiome
RHBG		187.4 kb	Distal	Multiome
ARHGEF2		203.2 kb	Distal	Multiome
MIR9-1HG		240.0 kb	Distal	Multiome
KHDC4		247.4 kb	Distal	Multiome
RIT1		270.4 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

145 transcription factors

ARID3A 1 dataset

ChIP HepG2 ENCFF341DES 187 bp overlap

ARID4B 1 dataset

ChIP HepG2 ENCFF519OXJ 546 bp overlap

ARID5B 1 dataset

ChIP HepG2 ENCFF964FWK 149 bp overlap

ASH2L 1 dataset

ChIP H1 ENCFF399KAM 258 bp overlap

ATOH7 1 dataset

Motif DE_72h DE_72h-ATOH7_MA1468.1 10 bp overlap

Ascl2 1 dataset

Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap

ChIP HAP1 GSE108387.BRD4.HAP1 165 bp overlap

CAVIN1 1 dataset

ChIP K562 ENCFF731YBD 190 bp overlap

CBFA2T2 1 dataset

ChIP K562 ENCFF963TXY 381 bp overlap

CBFA2T3 1 dataset

ChIP K562 ENCFF673OEZ 135 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCFF432ZEW 66 bp overlap

CREB3 1 dataset

ChIP K562 ENCFF985QJI 381 bp overlap

CTBP1 1 dataset

ChIP K562 ENCFF403WPG 545 bp overlap

CTCF 4 datasets

ChIP GM23338 ENCFF772DML 201 bp overlap

ChIP HepG2 ENCFF757EKU 351 bp overlap

ChIP K562 ENCFF111MGE 245 bp overlap

ChIP endodermal cell ENCFF471YCZ 461 bp overlap

CTCFL 1 dataset

Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap

CXXC5 2 datasets

ChIP K562 ENCFF497CZN 308 bp overlap

ChIP K562 ENCFF497CZN 544 bp overlap

Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap

DDX20 1 dataset

ChIP K562 ENCFF373BEC 231 bp overlap

DMAP1 2 datasets

ChIP HepG2 ENCFF247MSU 629 bp overlap

ChIP HepG2 ENCFF247MSU 274 bp overlap

DMBX1 1 dataset

ChIP K562 ENCFF972HXB 234 bp overlap

ChIP K562 ENCFF775HUO 236 bp overlap

Dmbx1 1 dataset

Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap

EBF1 3 datasets

Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap

Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap

Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap

ChIP A549 ENCFF352AOI 212 bp overlap

ChIP K562 ENCFF496AKI 277 bp overlap

EP400 1 dataset

ChIP K562 ENCFF850OZQ 552 bp overlap

Ebf4 3 datasets

Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap

Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap

Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 368 bp overlap

ChIP DE DE-FOXA2-2 334 bp overlap

ChIP HepG2 ENCFF894AYY 74 bp overlap

FOXK2 1 dataset

ChIP K562 ENCFF245WKP 76 bp overlap

FOXP1 1 dataset

ChIP HepG2 ENCFF823ERM 101 bp overlap

FOXP4 1 dataset

ChIP HepG2 ENCFF462ULY 122 bp overlap

FOXS1 1 dataset

ChIP A549 ENCFF870VDS 121 bp overlap

GATA1 3 datasets

Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap

Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap

Motif ES_0h ES_0h-GATA1_MA0035.5 7 bp overlap

GATA1::TAL1 3 datasets

Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap

Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 592 bp overlap

ChIP DE DE-GATA4-2 632 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 628 bp overlap

ChIP DE DE-GATA6-2 632 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 288 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 382 bp overlap

GATAD1 1 dataset

ChIP HepG2 ENCFF044OVE 481 bp overlap

GATAD2A 2 datasets

ChIP HepG2 ENCFF252XNH 188 bp overlap

ChIP HepG2 ENCFF252XNH 455 bp overlap

GATAD2B 1 dataset

ChIP HepG2 ENCFF829IBY 162 bp overlap

GLIS2 1 dataset

Motif DE_72h DE_72h-GLIS2_MA0736.1 14 bp overlap

Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap

Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap

GTF2A2 1 dataset

ChIP K562 ENCFF041WRN 260 bp overlap

HAND2 1 dataset

Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap

HDAC1 1 dataset

ChIP K562 ENCFF968WBH 473 bp overlap

HDAC2 1 dataset

ChIP HepG2 ENCFF990GUQ 445 bp overlap

ChIP A549 ENCFF588UHP 209 bp overlap

HMBOX1 1 dataset

ChIP K562 ENCFF055GAZ 463 bp overlap

HMGA2 1 dataset

ChIP A549 ENCFF624CAQ 110 bp overlap

HNF1A 1 dataset

ChIP HepG2 ENCFF540TRC 398 bp overlap

HOXB13 1 dataset

ChIP A549 ENCFF870NOA 217 bp overlap

HOXB5 1 dataset

ChIP A549 ENCFF891VDO 146 bp overlap

ChIP K562 ENCFF170RNI 106 bp overlap

ChIP K562 ENCFF170RNI 481 bp overlap

IKZF1 3 datasets

Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap

ChIP K562 ENCFF771OHZ 497 bp overlap

ChIP K562 ENCFF771OHZ 315 bp overlap

IKZF2 1 dataset

Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap

ChIP K562 ENCFF055LPP 227 bp overlap

ChIP K562 ENCFF277KTJ 337 bp overlap

IRF2 2 datasets

ChIP HepG2 ENCFF532TQV 461 bp overlap

ChIP HepG2 ENCFF532TQV 328 bp overlap

ChIP K562 ENCFF346PQL 249 bp overlap

Motif DE_72h DE_72h-JUN_MA0488.2 10 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 259 bp overlap

KAT7 2 datasets

ChIP HepG2 ENCFF613PTN 582 bp overlap

ChIP HepG2 ENCFF613PTN 500 bp overlap

ChIP HepG2 ENCFF890JFC 208 bp overlap

L3MBTL2 1 dataset

ChIP K562 ENCFF320EQC 542 bp overlap

ChIP HepG2 ENCFF499KCU 353 bp overlap

LIN54 1 dataset

ChIP HepG2 ENCFF662XDE 632 bp overlap

ChIP A549 ENCFF310XGQ 512 bp overlap

ChIP HepG2 ENCFF507HCX 391 bp overlap

ChIP K562 ENCFF110LJS 351 bp overlap

ChIP K562 ENCFF398VJM 528 bp overlap

ChIP K562 ENCFF524IJO 231 bp overlap

MEF2D 1 dataset

ChIP K562 ENCFF392LDT 211 bp overlap

ChIP HepG2 ENCFF057YJE 514 bp overlap

ChIP K562 ENCFF140CEX 533 bp overlap

ChIP K562 ENCFF140CEX 481 bp overlap

ChIP HepG2 ENCFF701PYP 350 bp overlap

ChIP K562 ENCFF342DNS 155 bp overlap

ChIP K562 ENCFF450LDL 410 bp overlap

ChIP K562 ENCFF450LDL 506 bp overlap

ChIP K562 ENCFF820IGH 337 bp overlap

Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap

NCOA2 1 dataset

ChIP HepG2 ENCFF853BJJ 145 bp overlap

NEUROD1 1 dataset

Motif DE_72h DE_72h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_72h DE_72h-NEUROG2_MA0669.1 10 bp overlap

NFIL3 1 dataset

ChIP HepG2 ENCFF686VLI 103 bp overlap

NR2C1 1 dataset

ChIP K562 ENCFF568JLK 193 bp overlap

NR4A1 1 dataset

ChIP K562 ENCFF998LHF 353 bp overlap

NR5A2 1 dataset

ChIP A549 ENCFF834RVE 279 bp overlap

Neurod2 1 dataset

Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap

OLIG1 1 dataset

Motif DE_72h DE_72h-OLIG1_MA0826.1 10 bp overlap

Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap

ChIP WTC11 ENCFF634NAO 245 bp overlap

Motif DE_72h DE_72h-PAX6_MA0069.1 14 bp overlap

PAXIP1 2 datasets

ChIP HepG2 ENCFF526NOJ 432 bp overlap

ChIP HepG2 ENCFF526NOJ 150 bp overlap

ChIP A549 ENCFF475JCE 214 bp overlap

PHF21A 1 dataset

ChIP HepG2 ENCFF525EUW 547 bp overlap

PITX1 1 dataset

Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap

PLAGL2 1 dataset

Motif DE_72h DE_72h-PLAGL2_MA1548.2 8 bp overlap

POLR2A 2 datasets

ChIP GM23338 ENCFF450WCS 491 bp overlap

ChIP GM23338 ENCFF450WCS 399 bp overlap

POU2F1 1 dataset

ChIP HepG2 ENCFF422JZU 345 bp overlap

POU3F1 1 dataset

Motif DE_72h DE_72h-POU3F1_MA0786.2 10 bp overlap

PROX1 1 dataset

ChIP HepG2 ENCFF016ZJS 395 bp overlap

PTTG1 1 dataset

ChIP K562 ENCFF017KRM 247 bp overlap

PYGO2 1 dataset

ChIP K562 ENCFF458IIA 138 bp overlap

Plagl1 1 dataset

Motif DE_72h DE_72h-Plagl1_MA1615.2 8 bp overlap

Ptf1A 1 dataset

Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap

RAD21 3 datasets

ChIP K562 ENCFF169SQI 171 bp overlap

ChIP K562 ENCFF634XYR 365 bp overlap

ChIP K562 ENCFF634XYR 326 bp overlap

RBPJ 4 datasets

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap

Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

ChIP K562 ENCFF892SPR 300 bp overlap

RHOXF1 1 dataset

Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap

RNF2 2 datasets

ChIP K562 ENCFF653BQJ 594 bp overlap

ChIP K562 ENCFF653BQJ 450 bp overlap

SALL1 2 datasets

ChIP HepG2 ENCFF426MCK 497 bp overlap

ChIP HepG2 ENCFF426MCK 379 bp overlap

SAP130 1 dataset

ChIP HepG2 ENCFF892EHZ 180 bp overlap

SIN3A 1 dataset

ChIP H1 ENCFF042ZSL 511 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 632 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 448 bp overlap

SMAD3 1 dataset

ChIP HepG2 ENCFF309PKF 485 bp overlap

SMAD4 1 dataset

ChIP K562 ENCFF628RBP 304 bp overlap

SMAD7 2 datasets

ChIP HepG2 ENCFF850FXR 425 bp overlap

ChIP HepG2 ENCFF850FXR 203 bp overlap

SMARCA4 1 dataset

ChIP K562 ENCFF506JCB 488 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 487 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 631 bp overlap

SOX6 2 datasets

ChIP HepG2 ENCFF767OCK 426 bp overlap

ChIP HepG2 ENCFF767OCK 171 bp overlap

ChIP HepG2 ENCFF931FHV 327 bp overlap

Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap

Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap

Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap

ChIP K562 ENCFF620GMX 385 bp overlap

TAL1::TCF3 1 dataset

Motif DE_72h DE_72h-TAL1TCF3_MA0091.2 10 bp overlap

ChIP H1 ENCFF859IIO 377 bp overlap

ChIP H1 ENCFF859IIO 352 bp overlap

TBX2 3 datasets

ChIP HepG2 ENCFF811TLA 579 bp overlap

ChIP HepG2 ENCFF811TLA 353 bp overlap

ChIP HepG2 ENCFF811TLA 137 bp overlap

TCF12 1 dataset

ChIP K562 ENCFF931DJY 391 bp overlap

ChIP K562 ENCFF319QZT 381 bp overlap

TCF7L2 1 dataset

ChIP HepG2 ENCFF510OLG 434 bp overlap

TEAD1 1 dataset

Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap

TFAP4 1 dataset

ChIP K562 ENCFF727PXG 525 bp overlap

TFDP1 1 dataset

ChIP HepG2 ENCFF717XKC 357 bp overlap

THAP11 1 dataset

ChIP HepG2 ENCFF272SWH 175 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP K562 ENCFF633EZB 265 bp overlap

ChIP WTC11 ENCFF139JAW 417 bp overlap

ZBTB2 1 dataset

ChIP K-562 ENCSR230PTV.ZBTB2.K-562 94 bp overlap

ZBTB25 1 dataset

ChIP HepG2 ENCFF648SDH 184 bp overlap

ZGPAT 1 dataset

ChIP HepG2 ENCFF055YSO 632 bp overlap

ZNF143 3 datasets

Motif DE_72h DE_72h-ZNF143_MA0088.2 16 bp overlap

ChIP HepG2 ENCFF658YIR 491 bp overlap

ChIP WTC11 ENCFF249JUK 485 bp overlap

ZNF215 1 dataset

ChIP K562 ENCFF317MOH 187 bp overlap

ZNF221 1 dataset

ChIP HepG2 ENCFF374BUN 240 bp overlap

ZNF302 1 dataset

ChIP A549 ENCFF333REI 166 bp overlap

ZNF311 1 dataset

ChIP K562 ENCFF986QSP 183 bp overlap

ZNF528 2 datasets

Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap

Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap

ZNF549 1 dataset

Motif DE_72h DE_72h-ZNF549_MA1728.2 8 bp overlap

ZNF592 3 datasets

ChIP K-562 ENCSR249BHQ.ZNF592.K-562 128 bp overlap

ChIP K562 ENCFF547OSS 347 bp overlap

ChIP K562 ENCFF547OSS 351 bp overlap

ZNF740 1 dataset

ChIP K562 ENCFF447IXE 299 bp overlap

ZNF766 2 datasets

Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap

ChIP K562 ENCFF348LDO 553 bp overlap

ZNF792 1 dataset

ChIP HepG2 ENCFF825WPU 368 bp overlap

ZSCAN20 1 dataset

ChIP A549 ENCFF611TGC 124 bp overlap