SLC25A44
solute carrier family 25 member 44 | FLJ90431, KIAA0446
SLC25A44 — as a Regulated Gene

TFs regulating SLC25A44 0 TFs

Transcription factors with Perturb-seq knockdown data for SLC25A44. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = SLC25A44 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to SLC25A44

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of SLC25A44, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr1:155,910,686–155,911,579 282.7 kb Distal (>10kb) Multiome 691
chr1:155,934,107–155,934,787 259.6 kb Distal (>10kb) Multiome 872
chr1:155,976,727–155,977,187 217.2 kb Distal (>10kb) Multiome 316
chr1:155,977,296–155,979,264 215.4 kb Distal (>10kb) Multiome 698
chr1:156,020,469–156,021,128 173.2 kb Distal (>10kb) Multiome 558
chr1:156,052,923–156,055,358 139.2 kb Distal (>10kb) Multiome 1053
chr1:156,060,806–156,061,738 132.9 kb Distal (>10kb) Multiome 318
chr1:156,063,507–156,064,184 130.3 kb Distal (>10kb) Multiome 199
chr1:156,076,488–156,077,355 117.1 kb Distal (>10kb) Multiome 246
chr1:156,081,942–156,083,586 111.5 kb Distal (>10kb) Multiome 670
chr1:156,105,879–156,107,316 87.5 kb Distal (>10kb) Multiome 663
chr1:156,114,184–156,115,669 79.4 kb Distal (>10kb) Multiome 824
chr1:156,123,520–156,124,091 70.3 kb Distal (>10kb) Multiome 679
chr1:156,129,945–156,130,610 63.7 kb Distal (>10kb) Multiome 733
chr1:156,146,058–156,146,760 47.8 kb Distal (>10kb) Multiome 429
chr1:156,149,593–156,150,242 44.1 kb Distal (>10kb) Multiome 194
chr1:156,160,602–156,161,218 33.0 kb Distal (>10kb) Multiome 218
chr1:156,181,487–156,182,119 12.3 kb Distal (>10kb) Multiome 145
chr1:156,184,002–156,185,155 9.7 kb Proximal (<10kb) Multiome 216
chr1:156,193,531–156,194,375 150 bp At TSS Multiome 751
chr1:156,212,611–156,213,686 19.0 kb Distal (>10kb) Multiome 893
chr1:156,245,413–156,246,269 51.7 kb Distal (>10kb) Multiome 380
chr1:156,282,165–156,283,323 88.8 kb Distal (>10kb) Multiome 973
chr1:156,291,233–156,291,857 97.4 kb Distal (>10kb) Multiome 518
chr1:156,337,825–156,339,056 144.4 kb Distal (>10kb) Multiome 836
chr1:156,356,873–156,357,393 163.0 kb Distal (>10kb) Multiome 506
chr1:156,368,893–156,369,552 175.1 kb Distal (>10kb) Multiome 529
chr1:156,420,712–156,422,291 227.6 kb Distal (>10kb) Multiome 569
chr1:156,429,277–156,430,847 235.8 kb Distal (>10kb) Multiome 231
chr1:156,432,112–156,432,986 238.5 kb Distal (>10kb) Multiome 50
chr1:156,439,076–156,440,265 245.9 kb Distal (>10kb) Multiome 264
chr1:156,456,348–156,457,982 262.6 kb Distal (>10kb) Multiome 1033

Genome Browser

Genomic view of the SLC25A44 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr1:155,900,686 – 156,467,982
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq