chr6 : 28,977,296 – 28,977,786
490 bp 157 TFs 3 linked genes
This 490 bp open chromatin element is linked to RN7SL471P, HCG15, and ENSG00000244349 and is bound by 157 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RN7SL471P at TSS At TSS Proximity
HCG15 8.4 kb Proximal Proximity
ENSG00000244349 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:28,972,296 – 28,982,786
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
157 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 293 bp overlap
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 398 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 490 bp overlap
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 446 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 446 bp overlap
AR 2 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 337 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 268 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 338 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 161 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 490 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 203 bp overlap
ASH2L 3 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 322 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 268 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 56 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 93 bp overlap
ChIP K562 ENCFF921JQW 242 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 287 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 159 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 135 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 480 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 490 bp overlap
BRCA1 1 dataset
ChIP SH-EP_pWZL-MYCNwt GSE111905.BRCA1.SH-EP_pWZL-MYCNwt 95 bp overlap
BRD2 15 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 490 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 490 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 490 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 476 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD2.MV4-11_DMSO 230 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 332 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 300 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 490 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 490 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 490 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD2.THP-1_DMSO-PMA 157 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 351 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 490 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 446 bp overlap
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 434 bp overlap
BRD3 6 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 224 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 430 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 393 bp overlap
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 490 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 490 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD3.THP-1_iBET-BD2 473 bp overlap
BRD4 34 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 370 bp overlap
ChIP 402-91 GSE111253.BRD4.402-91 391 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 286 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 390 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 326 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 349 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 490 bp overlap
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 354 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 449 bp overlap
ChIP HCC1806_300nMJQ1_24h GSE87418.BRD4.HCC1806_300nMJQ1_24h 178 bp overlap
ChIP HCC1806_DMSO_24h GSE87418.BRD4.HCC1806_DMSO_24h 490 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 176 bp overlap
ChIP K-562 ENCSR583ACG.BRD4.K-562 153 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 490 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 406 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 323 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 166 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 405 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 348 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 490 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 236 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 229 bp overlap
ChIP OCI-AML3 GSE104745.BRD4.OCI-AML3 263 bp overlap
ChIP SEM GSE83671.BRD4.SEM 490 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 490 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 490 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 142 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD4.THP-1_iBET-BD1 414 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 192 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 490 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 426 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 344 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 240 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 372 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 155 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 251 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 120 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 490 bp overlap
CEBPA 2 datasets
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 136 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 458 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 293 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP MDA-MB-134-VI GSE109103.CREB1.MDA-MB-134-VI 281 bp overlap
CREBBP 5 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 413 bp overlap
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 123 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 146 bp overlap
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 382 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 143 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 220 bp overlap
CTCF 6 datasets
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 125 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 312 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 323 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 157 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 328 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 319 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 100 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 83 bp overlap
E2F3 1 dataset
ChIP K562 ENCFF922ILX 331 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 166 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 174 bp overlap
ERG 1 dataset
ChIP SEM GSE117864.ERG.SEM 467 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 409 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 486 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 276 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 373 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 444 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 365 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 221 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 221 bp overlap
ChIP SCC-25 GSE109884.ETS1.SCC-25 368 bp overlap
EZH2 9 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 490 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 490 bp overlap
ChIP SU-DHL-6 ENCFF882RXP 437 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 489 bp overlap
ChIP SU-DHL-6 ENCSR090TRI.EZH2.SU-DHL-6 167 bp overlap
ChIP neural progenitor cell ENCFF472NFV 490 bp overlap
ChIP neural progenitor cell ENCFF472NFV 490 bp overlap
ChIP neural progenitor cell ENCFF472NFV 230 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 490 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 363 bp overlap
FIP1L1 3 datasets
ChIP K-562 GSE120104.FIP1L1.K-562 260 bp overlap
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 233 bp overlap
ChIP K562 ENCFF002WKI 490 bp overlap
FLI1 2 datasets
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 207 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 273 bp overlap
FOS 3 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 294 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 61 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 50 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 89 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 453 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 390 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 482 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 386 bp overlap
GABPA 1 dataset
ChIP HL-60 ENCSR000BTK.GABPA.HL-60 153 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 239 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 165 bp overlap
GATA2 3 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 490 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 215 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 172 bp overlap
GATA6 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 332 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 322 bp overlap
GTF2F1 3 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 340 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 345 bp overlap
ChIP K562 ENCFF501ZHS 405 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 191 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 218 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 303 bp overlap
INTS11 2 datasets
ChIP HL-60 GSE106359.INTS11.HL-60 490 bp overlap
ChIP HL-60_PMA GSE106359.INTS11.HL-60_PMA 387 bp overlap
INTS13 3 datasets
ChIP HL-60 GSE106359.INTS13.HL-60 427 bp overlap
ChIP HL-60_PMA GSE106359.INTS13.HL-60_PMA 377 bp overlap
ChIP HL-60_shEGR1 GSE106359.INTS13.HL-60_shEGR1 301 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 219 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 316 bp overlap
JUN 11 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 307 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 207 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 490 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 170 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 344 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 378 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 281 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 179 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 161 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 399 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 248 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 216 bp overlap
KAT7 1 dataset
ChIP WTC11 ENCFF581TPB 371 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 490 bp overlap
KDM4A 5 datasets
ChIP H1 ENCFF078LED 490 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 318 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 188 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 278 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 450 bp overlap
KLF3 2 datasets
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
ChIP keratinocyte GSE140991.KLF3.keratinocyte 140 bp overlap
KMT2A 11 datasets
ChIP MOLM-13_DMSO-D3-180110 GSE127507.KMT2A.MOLM-13_DMSO-D3-180110 282 bp overlap
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 490 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 266 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 414 bp overlap
ChIP OCI-AML-3_VTP GSE129636.KMT2A.OCI-AML-3_VTP 329 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 490 bp overlap
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 327 bp overlap
ChIP RS4-11_VTP-d3-180402 GSE127507.KMT2A.RS4-11_VTP-d3-180402 388 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 490 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 338 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 75 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 134 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 391 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 422 bp overlap
MAFG 1 dataset
ChIP K562 ENCFF455EEO 77 bp overlap
MBD1 1 dataset
ChIP K562 ENCFF741LIL 201 bp overlap
MECOM 2 datasets
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 178 bp overlap
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 381 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 490 bp overlap
MED1 5 datasets
ChIP AML GSE154985.MED1.AML 395 bp overlap
ChIP MOLM-13 GSE154985.MED1.MOLM-13 490 bp overlap
ChIP MOLM-14_DHE GSE124963.MED1.MOLM-14_DHE 120 bp overlap
ChIP MOLM-14_Veh GSE124963.MED1.MOLM-14_Veh 275 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 438 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 252 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 211 bp overlap
MLLT1_FKB 1 dataset
ChIP MV4-11 GSE82116.MLLT1_FKB.MV4-11 490 bp overlap
MYB 3 datasets
ChIP SEM GSE117864.MYB.SEM 490 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 211 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 96 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 296 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 349 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 395 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 357 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 454 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 194 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 218 bp overlap
NFE2 1 dataset
ChIP K562 ENCFF047YKA 89 bp overlap
NFE2L2 1 dataset
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 174 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F2 1 dataset
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 437 bp overlap
NSD2 1 dataset
ChIP K-562 ENCSR000AVE.NSD2.K-562 368 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nrf1 1 dataset
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 490 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 490 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 490 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 490 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 252 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 334 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 380 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 490 bp overlap
POLR2A 3 datasets
ChIP HL-60 ENCFF321XKE 312 bp overlap
ChIP erythroblast ENCFF498VMR 490 bp overlap
ChIP spleen ENCFF706IUS 465 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 282 bp overlap
POU5F1 4 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 189 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 473 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 437 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 178 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 490 bp overlap
PRPF4 4 datasets
ChIP K-562 GSE120104.PRPF4.K-562 388 bp overlap
ChIP K-562 ENCSR220YXI.PRPF4.K-562 372 bp overlap
ChIP K562 ENCFF046WLD 490 bp overlap
ChIP K562 ENCFF202AJJ 490 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
RBFOX2 5 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 309 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 198 bp overlap
ChIP K562 ENCFF196WTG 490 bp overlap
ChIP K562 ENCFF967GRF 490 bp overlap
ChIP K562 ENCFF967GRF 433 bp overlap
RBM14 1 dataset
ChIP K-562 ENCSR423FCW.RBM14.K-562 337 bp overlap
RBM14,RBM14-RBM4 2 datasets
ChIP K562 ENCFF118FCO 449 bp overlap
ChIP K562 ENCFF857JAI 449 bp overlap
RBM22 1 dataset
ChIP K-562 GSE120104.RBM22.K-562 278 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 194 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 198 bp overlap
RELA 15 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 50 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 87 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 90 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 321 bp overlap
ChIP HEK293 GSE89017.RELA.HEK293 474 bp overlap
ChIP HEK293_30_min GSE89017.RELA.HEK293_30_min 328 bp overlap
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 451 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.RELA.THP-1_eGFP-Pam3csk-4h 431 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 238 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 56 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 70 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 54 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 84 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 93 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 323 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 490 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 490 bp overlap
RUNX1 6 datasets
ChIP AML GSE111821.RUNX1.AML 418 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 490 bp overlap
ChIP H9_DOX-5_HA GSE137670.RUNX1.H9_DOX-5_HA 210 bp overlap
ChIP MCF-10A GSE129314.RUNX1.MCF-10A 196 bp overlap
ChIP MV4-11 GSE79899.RUNX1.MV4-11 373 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 490 bp overlap
RUNX1T1 5 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 450 bp overlap
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 414 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 238 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 304 bp overlap
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 331 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 490 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 312 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 231 bp overlap
SETDB1 2 datasets
ChIP K-562 ENCSR000EWI.SETDB1.K-562 366 bp overlap
ChIP K562 ENCFF745PAW 427 bp overlap
SIN3A 2 datasets
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 329 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 353 bp overlap
SKI 3 datasets
ChIP HL-60 GSE107553.SKI.HL-60 188 bp overlap
ChIP HL-60 GSE107553.SKI.HL-60 144 bp overlap
ChIP HL-60_CRISPRCas9_ctrl GSE107553.SKI.HL-60_CRISPRCas9_ctrl 255 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 359 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 348 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 376 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 384 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 303 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 275 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 328 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 229 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 277 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 358 bp overlap
ChIP HeLa-S3 ENCSR000EDM.SMARCC1.HeLa-S3 141 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 196 bp overlap
SMC3 2 datasets
ChIP peripheral-blood-neutrophil GSE126755.SMC3.peripheral-blood-neutrophil 305 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 490 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 207 bp overlap
SPI1 11 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 95 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 132 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 99 bp overlap
ChIP HL-60 ENCFF645GBT 169 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 182 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 132 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 102 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 74 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 64 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 118 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 142 bp overlap
SREBP2 4 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 490 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 490 bp overlap
ChIP monocyte GSE129202.SREBP2.monocyte 155 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 406 bp overlap
SRSF3 2 datasets
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 345 bp overlap
ChIP K-562 GSE120104.SRSF3.K-562 311 bp overlap
STAG2 1 dataset
ChIP HL-60 GSE131577.STAG2.HL-60 242 bp overlap
STAT3 4 datasets
ChIP FaDu_BB608 GSE78212.STAT3.FaDu_BB608 240 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 53 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 120 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 121 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 427 bp overlap
TAF1 1 dataset
ChIP GM12892 ENCFF440DJD 301 bp overlap
TBP 4 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 183 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 490 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 490 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 490 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 281 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 226 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 72 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 77 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 415 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 332 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 97 bp overlap
TP63 2 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 204 bp overlap
ChIP breast-organoid GSE113909.TP63.breast-organoid 143 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 483 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 490 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 396 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 375 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 487 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 147 bp overlap
ZBED2 1 dataset
ChIP SUIT-2 GSE141606.ZBED2.SUIT-2 349 bp overlap
ZBTB33 4 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 490 bp overlap
ChIP K562 ENCFF427SDV 443 bp overlap
ChIP K562 ENCFF427SDV 352 bp overlap
ChIP K562 ENCFF875HLX 490 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 309 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 382 bp overlap
ZBTB7A 3 datasets
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 306 bp overlap
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 322 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 342 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 152 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 104 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 54 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 246 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 135 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 75 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 71 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 93 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Huangfu Lab · Publications · Resources · Contact