chr1:16,534,972–16,535,673

chr1 : 16,534,972 – 16,535,673

701 bp 146 TFs 8 linked genes

This 701 bp open chromatin element is linked to 8 target genes and is bound by 146 transcription factors.

Linked Genes

8 genes

Gene	Expression	Dist. to TSS	Distance	Link type
LINC01783		at TSS	At TSS	Proximity
CROCCP3		36.0 kb	Distal	Multiome
NBPF1		78.2 kb	Distal	Multiome
NECAP2		94.6 kb	Distal	Multiome
SZRD1		168.1 kb	Distal	Multiome
FBXO42		182.8 kb	Distal	Multiome
ENSG00000290851		224.0 kb	Distal	Multiome
CROCC		386.6 kb	Distal	Multiome+HiCAR

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

146 transcription factors

ARID4B 2 datasets

ChIP HepG2 ENCFF519OXJ 434 bp overlap

ChIP HepG2 ENCFF519OXJ 220 bp overlap

ARID5B 1 dataset

ChIP HepG2 ENCFF964FWK 379 bp overlap

ASH2L 1 dataset

ChIP H1 ENCFF399KAM 148 bp overlap

ATF3 2 datasets

ChIP HCT116 ENCFF088WVX 371 bp overlap

ChIP liver ENCFF867MFZ 431 bp overlap

BCL11A 1 dataset

ChIP HEK293 ENCFF294OHB 271 bp overlap

BCL11B 1 dataset

ChIP HEK293 ENCFF859UHP 341 bp overlap

ChIP HepG2 ENCFF349HFU 421 bp overlap

ChIP HCT116 ENCFF947BOL 431 bp overlap

CREB1 1 dataset

ChIP H1 ENCFF955PMP 68 bp overlap

CTCF 2 datasets

ChIP chondrocyte ENCFF134ORZ 366 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF812HQJ 551 bp overlap

Cebpa 4 datasets

ChIP BLaER1 ENCFF031ISE 701 bp overlap

ChIP BLaER1 ENCFF274GAT 658 bp overlap

ChIP BLaER1 ENCFF335XTP 292 bp overlap

ChIP BLaER1 ENCFF896HSY 164 bp overlap

ChIP HepG2 ENCFF919WXY 398 bp overlap

ChIP HepG2 ENCFF633ULY 421 bp overlap

ChIP HepG2 ENCFF647PIT 541 bp overlap

EZH2 4 datasets

ChIP endothelial cell of umbilical vein ENCFF539AKL 385 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 595 bp overlap

ChIP fibroblast of dermis ENCFF029VZK 540 bp overlap

ChIP neural progenitor cell ENCFF018MKA 532 bp overlap

FIGLA 1 dataset

Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap

FOXA1 1 dataset

ChIP HepG2 ENCFF361KNY 285 bp overlap

FOXA2 1 dataset

ChIP HepG2 ENCFF570ABM 252 bp overlap

FOXP4 1 dataset

ChIP HepG2 ENCFF462ULY 431 bp overlap

GABPB1 3 datasets

ChIP HepG2 ENCFF315AWN 146 bp overlap

ChIP HepG2 ENCFF315AWN 581 bp overlap

ChIP HepG2 ENCFF315AWN 381 bp overlap

GATA6 1 dataset

ChIP DE_D1 S41-DE-d1-GATA6-exp2 486 bp overlap

GATAD2A 1 dataset

ChIP HepG2 ENCFF252XNH 272 bp overlap

GFI1B 1 dataset

ChIP HEK293 ENCFF264FBS 322 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCFF299RSE 331 bp overlap

GLIS2 1 dataset

ChIP HEK293 ENCFF446EIF 338 bp overlap

HDAC2 1 dataset

ChIP HepG2 ENCFF990GUQ 445 bp overlap

ChIP HEK293 ENCFF252CFL 248 bp overlap

HMGXB4 5 datasets

ChIP HepG2 ENCFF032DND 504 bp overlap

ChIP HepG2 ENCFF032DND 701 bp overlap

ChIP HepG2 ENCFF179TAD 478 bp overlap

ChIP WTC11 ENCFF962POR 465 bp overlap

ChIP WTC11 ENCFF962POR 369 bp overlap

HNF4A 1 dataset

ChIP HepG2 ENCFF146SSF 361 bp overlap

HNRNPLL 1 dataset

ChIP HepG2 ENCFF355PIC 163 bp overlap

HOXA5 1 dataset

ChIP HepG2 ENCFF580MCT 399 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCFF518OXG 299 bp overlap

IKZF5 1 dataset

ChIP HepG2 ENCFF641EBK 545 bp overlap

ChIP HepG2 ENCFF532TQV 461 bp overlap

JARID2 1 dataset

ChIP HepG2 ENCFF484QCT 405 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 252 bp overlap

ChIP HepG2 ENCFF890JFC 186 bp overlap

KDM2A 1 dataset

ChIP HepG2 ENCFF491GTR 266 bp overlap

KDM3A 1 dataset

ChIP HepG2 ENCFF077DXQ 497 bp overlap

KDM4A 1 dataset

ChIP H1 ENCFF078LED 448 bp overlap

KDM5B 1 dataset

ChIP HepG2 ENCFF706LUI 440 bp overlap

KLF10 1 dataset

ChIP HEK293 ENCFF326EGX 375 bp overlap

KLF12 1 dataset

ChIP HepG2 ENCFF395LSO 410 bp overlap

KLF17 1 dataset

ChIP HEK293 ENCFF658MHR 400 bp overlap

ChIP HEK293 ENCFF929IAJ 162 bp overlap

ChIP HEK293 ENCFF588INF 356 bp overlap

ChIP HepG2 ENCFF499KCU 391 bp overlap

ChIP HepG2 ENCFF925PQA 437 bp overlap

ChIP A549 ENCFF310XGQ 525 bp overlap

ChIP HepG2 ENCFF507HCX 215 bp overlap

ChIP HEK293 ENCFF994GSG 458 bp overlap

ChIP HepG2 ENCFF495TSS 425 bp overlap

MEIS2 1 dataset

ChIP HepG2 ENCFF157BEH 411 bp overlap

ChIP HepG2 ENCFF057YJE 450 bp overlap

ChIP HepG2 ENCFF938KYA 475 bp overlap

NFKB2 2 datasets

ChIP HepG2 ENCFF165NTY 426 bp overlap

ChIP HepG2 ENCFF165NTY 561 bp overlap

ChIP HepG2 ENCFF883OMO 445 bp overlap

NKX3-1 2 datasets

ChIP HepG2 ENCFF031ZWH 328 bp overlap

ChIP HepG2 ENCFF031ZWH 465 bp overlap

NR2F6 1 dataset

ChIP HepG2 ENCFF514UJI 345 bp overlap

NR5A2 1 dataset

ChIP A549 ENCFF834RVE 294 bp overlap

ChIP H1 ENCFF582PEJ 245 bp overlap

ONECUT2 1 dataset

ChIP HepG2 ENCFF460COO 317 bp overlap

ChIP HEK293 ENCFF875BDB 366 bp overlap

PATZ1 2 datasets

ChIP HEK293 ENCFF016MNJ 221 bp overlap

ChIP HepG2 ENCFF723PFC 324 bp overlap

ChIP A549 ENCFF475JCE 280 bp overlap

PKNOX1 1 dataset

ChIP HEK293T ENCFF174WDB 326 bp overlap

POLR3A 1 dataset

ChIP HeLa-S3 ENCFF777TAS 457 bp overlap

POU2F1 1 dataset

ChIP HepG2 ENCFF422JZU 433 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 259 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 699 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 278 bp overlap

PROX1 1 dataset

ChIP HepG2 ENCFF016ZJS 391 bp overlap

RBBP5 1 dataset

ChIP H1 ENCFF905HFL 237 bp overlap

REST 2 datasets

ChIP neural cell ENCFF882LXX 398 bp overlap

ChIP neural cell ENCFF882LXX 505 bp overlap

SALL2 1 dataset

ChIP HepG2 ENCFF458XOD 470 bp overlap

SAP130 1 dataset

ChIP HepG2 ENCFF892EHZ 299 bp overlap

SIN3A 1 dataset

ChIP A549 ENCFF752ATT 464 bp overlap

ChIP HepG2 ENCFF631IPX 361 bp overlap

SOX13 1 dataset

ChIP HepG2 ENCFF062VSQ 357 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 576 bp overlap

ChIP HepG2 ENCFF767OCK 398 bp overlap

ChIP HEK293 ENCFF181QXT 316 bp overlap

ChIP HEK293 ENCFF087XLA 369 bp overlap

ChIP HEK293 ENCFF733RBE 207 bp overlap

SREBF2 2 datasets

ChIP A549 ENCFF252BOY 192 bp overlap

ChIP A549 ENCFF252BOY 204 bp overlap

SSRP1 1 dataset

ChIP HepG2 ENCFF540BLL 388 bp overlap

TAF1 2 datasets

ChIP HepG2 ENCFF946IUP 404 bp overlap

ChIP neural cell ENCFF468SPD 398 bp overlap

ChIP H1 ENCFF859IIO 103 bp overlap

ChIP HeLa-S3 ENCFF715NNJ 381 bp overlap

ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 200 bp overlap

ChIP HepG2 ENCFF023IVD 107 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 129 bp overlap

TEAD1 1 dataset

ChIP HepG2 ENCFF661PNM 377 bp overlap

TEAD4 2 datasets

ChIP A549 ENCFF243FTL 277 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

THAP11 1 dataset

ChIP HepG2 ENCFF272SWH 196 bp overlap

ChIP HepG2 ENCFF687JDU 391 bp overlap

ChIP HepG2 ENCFF424RNN 221 bp overlap

ZBED4 1 dataset

ChIP HepG2 ENCFF157CDZ 477 bp overlap

ZBTB11 1 dataset

ChIP HEK293 ENCFF262GZJ 400 bp overlap

ZBTB17 1 dataset

ChIP HEK293 ENCFF865LIO 251 bp overlap

ZBTB20 1 dataset

ChIP HEK293 ENCFF524ADK 319 bp overlap

ZBTB25 1 dataset

ChIP HepG2 ENCFF648SDH 377 bp overlap

ZBTB26 3 datasets

ChIP HEK293 ENCFF752POA 451 bp overlap

ChIP HEK293 ENCFF752POA 455 bp overlap

ChIP HEK293 ENCFF752TCU 400 bp overlap

ZBTB33 2 datasets

ChIP HCT116 ENCFF847AJN 277 bp overlap

ChIP K562 ENCFF875HLX 187 bp overlap

ZBTB6 1 dataset

ChIP HEK293 ENCFF881ECZ 270 bp overlap

ZBTB7B 2 datasets

ChIP HepG2 ENCFF763OCV 284 bp overlap

ChIP HepG2 ENCFF763OCV 170 bp overlap

ZBTB8A 1 dataset

ChIP HEK293 ENCFF303WRD 425 bp overlap

ZEB1 2 datasets

Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap

ChIP HEK293 ENCFF007TAP 218 bp overlap

ChIP HEK293 ENCFF847JIE 345 bp overlap

ZFP37 1 dataset

ChIP HEK293 ENCFF968PWB 368 bp overlap

ZFP69B 1 dataset

ChIP HEK293 ENCFF942LFP 384 bp overlap

ZFP90 2 datasets

ChIP HepG2 ENCFF409XXV 387 bp overlap

ChIP HepG2 ENCFF409XXV 537 bp overlap

ZFP91 1 dataset

ChIP HepG2 ENCFF012CME 535 bp overlap

ChIP HepG2 ENCFF106ELT 145 bp overlap

ChIP HepG2 ENCFF106ELT 513 bp overlap

ZNF10 1 dataset

ChIP HEK293 ENCFF611ZJI 353 bp overlap

ZNF142 1 dataset

ChIP HepG2 ENCFF422TCB 392 bp overlap

ZNF143 1 dataset

ChIP HepG2 ENCFF658YIR 389 bp overlap

ZNF160 1 dataset

ChIP HepG2 ENCFF091XHU 481 bp overlap

ChIP HEK293 ENCFF641ICT 411 bp overlap

ZNF219 2 datasets

ChIP HepG2 ENCFF266JIR 311 bp overlap

ChIP HepG2 ENCFF266JIR 431 bp overlap

ZNF232 1 dataset

ChIP HepG2 ENCFF905UTT 417 bp overlap

ZNF24 4 datasets

ChIP GM12878 ENCFF688STO 341 bp overlap

ChIP HEK293 ENCFF308WOW 337 bp overlap

ChIP HEK293 ENCFF308WOW 431 bp overlap

ChIP HepG2 ENCFF086UMQ 237 bp overlap

ZNF263 2 datasets

ChIP HEK293 ENCFF336CWQ 415 bp overlap

ChIP HepG2 ENCFF626SSV 451 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCFF784SLD 475 bp overlap

ZNF341 1 dataset

ChIP HEK293 ENCFF944VMC 434 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCFF799ATK 403 bp overlap

ZNF391 2 datasets

ChIP HEK293 ENCFF835SNY 347 bp overlap

ChIP HEK293 ENCFF835SNY 381 bp overlap

ZNF394 1 dataset

ChIP HEK293 ENCFF236OPX 333 bp overlap

ZNF423 2 datasets

ChIP HEK293 ENCFF937QHI 188 bp overlap

ChIP WTC11 ENCFF574PBR 212 bp overlap

ZNF48 2 datasets

ChIP HepG2 ENCFF362CDQ 482 bp overlap

ChIP HepG2 ENCFF362CDQ 591 bp overlap

ZNF503 1 dataset

ChIP HepG2 ENCFF923HZL 391 bp overlap

ZNF513 1 dataset

ChIP HepG2 ENCFF470YPH 297 bp overlap

ZNF561 1 dataset

ChIP HEK293 ENCFF399XKF 352 bp overlap

ZNF574 2 datasets

ChIP HepG2 ENCFF206MMY 417 bp overlap

ChIP HepG2 ENCFF206MMY 571 bp overlap

ZNF596 1 dataset

ChIP HEK293 ENCFF854MGB 156 bp overlap

ZNF600 1 dataset

ChIP HEK293 ENCFF785JSX 346 bp overlap

ZNF610 2 datasets

ChIP HEK293 ENCFF778UKJ 326 bp overlap

ChIP HEK293 ENCFF778UKJ 405 bp overlap

ZNF614 1 dataset

ChIP HepG2 ENCFF677IUD 122 bp overlap

ZNF629 2 datasets

ChIP HEK293 ENCFF096ELQ 192 bp overlap

ChIP HepG2 ENCFF490FFQ 371 bp overlap

ZNF639 1 dataset

ChIP HEK293 ENCFF971ZNH 388 bp overlap

ZNF660 2 datasets

ChIP HEK293 ENCFF282RUS 340 bp overlap

ChIP HEK293 ENCFF282RUS 421 bp overlap

ZNF687 1 dataset

ChIP HepG2 ENCFF653WIX 346 bp overlap

ZNF704 1 dataset

ChIP HepG2 ENCFF408LBU 637 bp overlap

ZNF710 1 dataset

ChIP HepG2 ENCFF170JWO 372 bp overlap

ZNF766 1 dataset

ChIP HepG2 ENCFF774VLV 444 bp overlap

ZNF777 3 datasets

ChIP HepG2 ENCFF362XDA 52 bp overlap

ChIP HepG2 ENCFF362XDA 373 bp overlap

ChIP HepG2 ENCFF362XDA 581 bp overlap

ZNF800 1 dataset

ChIP HepG2 ENCFF840FYM 506 bp overlap

ZNF837 1 dataset

ChIP HEK293 ENCFF961YOZ 298 bp overlap

ZSCAN16 1 dataset

ChIP HEK293 ENCFF533NFT 289 bp overlap

ZSCAN21 1 dataset

ChIP HEK293 ENCFF582WUP 208 bp overlap

ChIP HEK293 ENCFF835SGA 441 bp overlap