chr7 : 47,989,729 47,990,281
552 bp 165 TFs 3 linked genes
This 552 bp open chromatin element is linked to SUN3, HUS1, and UPP1 and is bound by 165 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
SUN3 766 bp At TSS Proximity
HUS1 10.4 kb Distal Multiome
UPP1 99.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:47,984,729 – 47,995,281
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
165 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 414 bp overlap
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 552 bp overlap
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 264 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 297 bp overlap
ATF1 1 dataset
ChIP HepG2 ENCFF239LTQ 487 bp overlap
ATOH7 2 datasets
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Motif ES_0h ES_0h-ATOH7_MA1468.1 10 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 359 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 354 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 298 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 301 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF245CBB 321 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 223 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 284 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DLX6 1 dataset
ChIP HepG2 ENCFF371CVH 342 bp overlap
DMAP1 1 dataset
ChIP HepG2 ENCFF247MSU 499 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Dmbx1 2 datasets
Motif DE_12h DE_12h-Dmbx1_MA0883.2 10 bp overlap
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
E2F8 2 datasets
ChIP HepG2 ENCFF117UYU 472 bp overlap
ChIP HepG2 ENCFF117UYU 476 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 331 bp overlap
EP300 1 dataset
ChIP HepG2 ENCFF076TMZ 334 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 430 bp overlap
ESRRA 2 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap
ESRRB 2 datasets
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif ES_0h ES_0h-ESRRB_MA0141.4 10 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 102 bp overlap
ETV5 1 dataset
ChIP HepG2 ENCFF456LSA 334 bp overlap
Esrrg 2 datasets
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
Motif ES_0h ES_0h-Esrrg_MA0643.2 9 bp overlap
FOSL2 1 dataset
ChIP HepG2 ENCFF548CXY 343 bp overlap
FOXA1 3 datasets
ChIP HepG2 ENCFF207NVJ 95 bp overlap
ChIP HepG2 ENCFF361KNY 285 bp overlap
ChIP HepG2 ENCFF740VZW 269 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 335 bp overlap
ChIP DE DE-FOXA2-2 235 bp overlap
ChIP HepG2 ENCFF533COJ 281 bp overlap
ChIP HepG2 ENCFF570ABM 163 bp overlap
ChIP HepG2 ENCFF894AYY 209 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 162 bp overlap
FOXJ3 1 dataset
ChIP HepG2 ENCFF430OSX 455 bp overlap
FOXK1 1 dataset
ChIP HepG2 ENCFF635XWY 367 bp overlap
FOXP1 1 dataset
ChIP HepG2 ENCFF823ERM 326 bp overlap
FOXP4 1 dataset
ChIP HepG2 ENCFF462ULY 379 bp overlap
GABPA 1 dataset
ChIP HepG2 ENCFF180FFY 347 bp overlap
GATAD1 1 dataset
ChIP HepG2 ENCFF044OVE 402 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 239 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF304IEJ 452 bp overlap
HDAC2 1 dataset
ChIP HepG2 ENCFF990GUQ 144 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 245 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 379 bp overlap
HNF1A 4 datasets
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
ChIP HepG2 ENCFF352VYI 324 bp overlap
ChIP HepG2 ENCFF540TRC 462 bp overlap
ChIP HepG2 ENCFF540TRC 427 bp overlap
HNF1B 2 datasets
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
ChIP HepG2 ENCFF928THX 443 bp overlap
HNF4A 1 dataset
ChIP HepG2 ENCFF146SSF 295 bp overlap
HOXA3 1 dataset
ChIP HepG2 ENCFF374TCI 435 bp overlap
IKZF5 1 dataset
ChIP HepG2 ENCFF641EBK 411 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 268 bp overlap
ISL2 1 dataset
ChIP HepG2 ENCFF742RIP 417 bp overlap
JUN::JUNB 2 datasets
Motif ES_0h ES_0h-JUNJUNB_MA1132.2 8 bp overlap
Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap
KAT8 1 dataset
ChIP HepG2 ENCFF890JFC 414 bp overlap
KDM6A 1 dataset
ChIP HepG2 ENCFF135ECT 381 bp overlap
KLF16 1 dataset
ChIP HepG2 ENCFF969FFI 407 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 374 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 514 bp overlap
MAF 3 datasets
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap
Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap
MAF::NFE2 3 datasets
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap
Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap
MAFA 3 datasets
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap
Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap
MAFG::NFE2L1 3 datasets
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MAX 3 datasets
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 109 bp overlap
ChIP HepG2 ENCFF479OHI 234 bp overlap
ChIP HepG2 ENCFF507HCX 314 bp overlap
MBD4 2 datasets
ChIP HepG2 ENCFF785HSD 420 bp overlap
ChIP HepG2 ENCFF785HSD 471 bp overlap
MED1 1 dataset
ChIP HepG2 ENCFF495TSS 398 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
ChIP HepG2 ENCFF157BEH 392 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 531 bp overlap
ChIP HepG2 ENCFF057YJE 505 bp overlap
MIXL1 1 dataset
ChIP HepG2 ENCFF817YFO 216 bp overlap
MLX 1 dataset
ChIP HepG2 ENCFF652PXN 311 bp overlap
MXI1 3 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
ChIP HepG2 ENCFF493ITN 332 bp overlap
MYC 1 dataset
ChIP HepG2 ENCFF575FXK 447 bp overlap
Mafg 2 datasets
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 382 bp overlap
NEUROG1 2 datasets
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
Motif ES_0h ES_0h-NEUROG1_MA0623.2 10 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 253 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 151 bp overlap
NR2F1 1 dataset
ChIP HepG2 ENCFF953UJL 301 bp overlap
NR2F6 2 datasets
ChIP HepG2 ENCFF429VKC 368 bp overlap
ChIP HepG2 ENCFF514UJI 130 bp overlap
NR5A1 3 datasets
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Motif ES_0h ES_0h-NR5A1_MA1540.3 12 bp overlap
ChIP HepG2 ENCFF970YZO 342 bp overlap
NR5A2 1 dataset
ChIP A549 ENCFF834RVE 394 bp overlap
Nfe2l2 3 datasets
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
Nr5A2 2 datasets
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
Motif ES_0h ES_0h-Nr5A2_MA0505.3 9 bp overlap
OSR1 1 dataset
ChIP SK-N-SH ENCFF025PMY 130 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PATZ1 2 datasets
ChIP HepG2 ENCFF723PFC 354 bp overlap
ChIP SK-N-SH ENCFF650NCN 226 bp overlap
PAX3 2 datasets
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap
PAXIP1 1 dataset
ChIP HepG2 ENCFF526NOJ 418 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
PITX1 3 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
ChIP HepG2 ENCFF468QTQ 201 bp overlap
PITX2 2 datasets
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
PPARG 1 dataset
ChIP HepG2 ENCFF329FBJ 323 bp overlap
PROP1 2 datasets
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 403 bp overlap
Pax7 2 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap
RAD21 1 dataset
ChIP HepG2 ENCFF360ZSW 217 bp overlap
RARA 3 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
ChIP HepG2 ENCFF582XUA 256 bp overlap
RARA::RXRG 2 datasets
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
Motif ES_0h ES_0h-RARARXRG_MA1149.2 17 bp overlap
RARB 1 dataset
ChIP SK-N-SH ENCFF475WOR 187 bp overlap
RCOR2 1 dataset
ChIP HepG2 ENCFF310RFX 333 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RREB1 2 datasets
ChIP HepG2 ENCFF986CSN 334 bp overlap
ChIP HepG2 ENCFF986CSN 357 bp overlap
RXRB 1 dataset
ChIP HepG2 ENCFF539ZAY 356 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 408 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 290 bp overlap
SIX1 1 dataset
ChIP HepG2 ENCFF587VYG 320 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 94 bp overlap
SIX4 1 dataset
ChIP HepG2 ENCFF372NPG 255 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 154 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH ENCFF449PID 183 bp overlap
SOX12 1 dataset
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 282 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 216 bp overlap
SOX6 2 datasets
ChIP HepG2 ENCFF767OCK 459 bp overlap
ChIP HepG2 ENCFF767OCK 452 bp overlap
SP5 1 dataset
ChIP HepG2 ENCFF931FHV 329 bp overlap
SPI1 1 dataset
ChIP HL-60 ENCFF645GBT 266 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 293 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 446 bp overlap
TCF7L2 1 dataset
ChIP HepG2 ENCFF510OLG 384 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 348 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 355 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 135 bp overlap
TFAP4::ETV1 2 datasets
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
TFDP1 1 dataset
ChIP HepG2 ENCFF717XKC 351 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 392 bp overlap
THRA 1 dataset
ChIP HepG2 ENCFF025KMX 326 bp overlap
TOX 1 dataset
ChIP SK-N-SH ENCFF977TQV 173 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 108 bp overlap
Tfcp2l1 2 datasets
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 478 bp overlap
ZBTB17 2 datasets
Motif DE_12h DE_12h-ZBTB17_MA2102.1 8 bp overlap
Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 401 bp overlap
ZBTB39 1 dataset
ChIP HepG2 ENCFF875PVQ 487 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 74 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 552 bp overlap
ZFY 1 dataset
ChIP HepG2 ENCFF106ELT 532 bp overlap
ZGPAT 1 dataset
ChIP HepG2 ENCFF055YSO 503 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 441 bp overlap
ZNF217 1 dataset
ChIP HepG2 ENCFF455XGO 445 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 350 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 443 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 420 bp overlap
ZNF331 2 datasets
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ChIP HepG2 ENCFF842SZN 355 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF410 2 datasets
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
Motif ES_0h ES_0h-ZNF410_MA0752.2 16 bp overlap
ZNF503 1 dataset
ChIP HepG2 ENCFF923HZL 358 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 482 bp overlap
ZNF608 1 dataset
ChIP SK-N-SH ENCFF518LYG 138 bp overlap
ZNF609 2 datasets
ChIP HepG2 ENCFF900FRP 417 bp overlap
ChIP HepG2 ENCFF900FRP 411 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 333 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF710 1 dataset
ChIP HepG2 ENCFF170JWO 464 bp overlap
ZSCAN21 1 dataset
ChIP HepG2 ENCFF676MFO 471 bp overlap