chr2 : 170,717,975 170,718,437
462 bp 147 TFs 2 linked genes
This 462 bp open chromatin element is linked to SP5 and LINC01124 and is bound by 147 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SP5 2.6 kb Proximal Proximity
LINC01124 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:170,712,975 – 170,723,437
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
147 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HepG2 ENCFF237BMI 320 bp overlap
ARID2 1 dataset
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 462 bp overlap
BORCS8,MEF2B 1 dataset
ChIP HepG2 ENCFF255VGS 343 bp overlap
BRCA1 1 dataset
ChIP HepG2 ENCFF585LUC 399 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 296 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 294 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 134 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 462 bp overlap
CREM 1 dataset
ChIP HepG2 ENCFF049UDY 283 bp overlap
CSRNP1 1 dataset
ChIP HepG2 ENCFF191UYG 230 bp overlap
DEAF1 1 dataset
ChIP keratinocyte GSE129965.DEAF1.keratinocyte 168 bp overlap
DLX6 1 dataset
ChIP HepG2 ENCFF371CVH 401 bp overlap
DNMT3B 2 datasets
ChIP HepG2 ENCFF341GEA 426 bp overlap
ChIP HepG2 ENCFF341GEA 302 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 388 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 462 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 177 bp overlap
EP300 1 dataset
ChIP HepG2 ENCFF354ACD 224 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 291 bp overlap
EZH2 15 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 462 bp overlap
ChIP A673 ENCFF790MVL 285 bp overlap
ChIP GM23248 ENCFF404ZHM 232 bp overlap
ChIP GM23248 ENCFF506FWX 353 bp overlap
ChIP GM23248 ENCFF506FWX 268 bp overlap
ChIP GM23338 ENCFF613YON 230 bp overlap
ChIP GM23338 ENCFF613YON 345 bp overlap
ChIP GM23338 ENCFF886DXX 357 bp overlap
ChIP H1 ENCFF232NZA 462 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 220 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 462 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 462 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 186 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 157 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 454 bp overlap
FIP1L1 3 datasets
ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 202 bp overlap
ChIP Hep-G2 GSE120104.FIP1L1.Hep-G2 462 bp overlap
ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 207 bp overlap
FOXA1 3 datasets
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP HepG2 ENCFF740VZW 137 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 212 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 360 bp overlap
FOXK1 3 datasets
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 244 bp overlap
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 148 bp overlap
ChIP HepG2 ENCFF635XWY 90 bp overlap
FOXO3 1 dataset
ChIP Hep-G2 GSE97661.FOXO3.Hep-G2 462 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 291 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 110 bp overlap
GABPA 1 dataset
ChIP HepG2 ENCFF180FFY 191 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 112 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 238 bp overlap
GTF2F1 2 datasets
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 178 bp overlap
ChIP Hep-G2 ENCSR382PVA.GTF2F1.Hep-G2 173 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 130 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 119 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 229 bp overlap
HMGXB4 2 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 202 bp overlap
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 91 bp overlap
HNRNPL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 291 bp overlap
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 279 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 111 bp overlap
ISL2 2 datasets
ChIP Hep-G2 ENCSR492IHH.ISL2.Hep-G2 417 bp overlap
ChIP HepG2 ENCFF742RIP 376 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 396 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF172HFZ 251 bp overlap
KAT7 1 dataset
ChIP HepG2 ENCFF613PTN 462 bp overlap
KDM1A 3 datasets
ChIP HepG2 ENCFF240UWG 253 bp overlap
ChIP HepG2 ENCFF240UWG 226 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 398 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 376 bp overlap
KLF12 1 dataset
ChIP HepG2 ENCFF395LSO 450 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 361 bp overlap
KMT2A 1 dataset
ChIP HepG2 ENCFF103PKS 410 bp overlap
L3MBTL4 1 dataset
ChIP Hep-G2 GSE97661.L3MBTL4.Hep-G2 176 bp overlap
MAF1 1 dataset
ChIP HepG2 ENCFF925PQA 403 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 192 bp overlap
MBD4 3 datasets
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 178 bp overlap
ChIP HepG2 ENCFF785HSD 409 bp overlap
ChIP HepG2 ENCFF785HSD 209 bp overlap
MED1 3 datasets
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 202 bp overlap
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 87 bp overlap
ChIP HepG2 ENCFF495TSS 419 bp overlap
MLLT10 1 dataset
ChIP HepG2 ENCFF596ZVX 242 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 462 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 218 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 137 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 184 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 222 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 175 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 80 bp overlap
NCOA1 2 datasets
ChIP HepG2 ENCFF624JES 97 bp overlap
ChIP HepG2 ENCFF624JES 348 bp overlap
NFAT5 2 datasets
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 118 bp overlap
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 90 bp overlap
NFIC 1 dataset
ChIP HepG2 ENCFF169TKU 168 bp overlap
NFYB 1 dataset
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 373 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 134 bp overlap
NKX3-1 1 dataset
ChIP HepG2 ENCFF031ZWH 405 bp overlap
NR2F1 1 dataset
ChIP HepG2 ENCFF518ZRY 321 bp overlap
NR2F2 1 dataset
ChIP HepG2 ENCFF483TVJ 276 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 169 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 58 bp overlap
PAF1 2 datasets
ChIP HepG2 ENCFF949UAN 346 bp overlap
ChIP HepG2 ENCFF949UAN 200 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 285 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 309 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 358 bp overlap
PHF8 2 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 462 bp overlap
ChIP HepG2 ENCFF892HVG 462 bp overlap
POLR2A 3 datasets
ChIP HepG2 ENCFF252NAR 270 bp overlap
ChIP HepG2 ENCFF350RIU 163 bp overlap
ChIP HepG2 ENCFF736SLT 462 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 462 bp overlap
ChIP HepG2 ENCFF508UTS 462 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 197 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 302 bp overlap
PREB 1 dataset
ChIP Hep-G2 ENCSR689JMN.PREB.Hep-G2 131 bp overlap
RAD21 1 dataset
ChIP HepG2 ENCFF916QGM 381 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 357 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 462 bp overlap
ChIP HepG2 ENCFF939HTZ 462 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 462 bp overlap
ChIP HepG2 ENCFF561IAJ 462 bp overlap
RBPJ 1 dataset
ChIP HepG2 ENCFF367CFI 434 bp overlap
RELA 1 dataset
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 165 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 359 bp overlap
RNF2 4 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 319 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 241 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 462 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 376 bp overlap
RNF219 2 datasets
ChIP HepG2 ENCFF710YJO 407 bp overlap
ChIP HepG2 ENCFF710YJO 348 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 417 bp overlap
SFPQ 1 dataset
ChIP Hep-G2 GSE120104.SFPQ.Hep-G2 230 bp overlap
SIN3A 1 dataset
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 352 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 124 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 128 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 182 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 117 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 462 bp overlap
SMAD9 1 dataset
ChIP HepG2 ENCFF185UOW 377 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 171 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 183 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 94 bp overlap
SRSF4 2 datasets
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 257 bp overlap
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 196 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 158 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 319 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 161 bp overlap
SSRP1 3 datasets
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 462 bp overlap
ChIP HepG2 ENCFF540BLL 333 bp overlap
ChIP HepG2 ENCFF540BLL 132 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 296 bp overlap
SUZ12 3 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 288 bp overlap
ChIP H1 ENCFF881NFR 462 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 453 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 462 bp overlap
TCF7 1 dataset
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 129 bp overlap
TCF7L2 1 dataset
ChIP HepG2 ENCFF510OLG 378 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 371 bp overlap
TEAD4 1 dataset
ChIP HepG2 ENCFF006QNB 276 bp overlap
TEF 1 dataset
ChIP HepG2 ENCFF661AUQ 332 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 425 bp overlap
TGIF2 1 dataset
ChIP HepG2 ENCFF421ZJN 289 bp overlap
THYN1 2 datasets
ChIP HepG2 ENCFF798MNZ 366 bp overlap
ChIP HepG2 ENCFF798MNZ 339 bp overlap
TOPORS 1 dataset
ChIP HepG2 ENCFF581ABM 291 bp overlap
U2AF1 3 datasets
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 462 bp overlap
ChIP Hep-G2 ENCSR868JLS.U2AF1.Hep-G2 168 bp overlap
ChIP Hep-G2 ENCSR868JLS.U2AF1.Hep-G2 102 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 259 bp overlap
ZBTB49 1 dataset
ChIP HepG2 ENCFF200LWQ 240 bp overlap
ZC3H13 1 dataset
ChIP HepG2 ENCFF444JZJ 152 bp overlap
ZFP37 1 dataset
ChIP Hep-G2 ENCSR505LJT.ZFP37.Hep-G2 122 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 413 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 159 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 462 bp overlap
ZNF12 3 datasets
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF347LSW 331 bp overlap
ChIP HepG2 ENCFF347LSW 103 bp overlap
ZNF142 2 datasets
ChIP Hep-G2 ENCSR512ECF.ZNF142.Hep-G2 462 bp overlap
ChIP HepG2 ENCFF422TCB 462 bp overlap
ZNF181 2 datasets
ChIP HepG2 ENCFF222AKV 303 bp overlap
ChIP HepG2 ENCFF222AKV 305 bp overlap
ZNF219 2 datasets
ChIP HepG2 ENCFF266JIR 361 bp overlap
ChIP HepG2 ENCFF266JIR 157 bp overlap
ZNF232 2 datasets
ChIP Hep-G2 ENCSR837GLU.ZNF232.Hep-G2 94 bp overlap
ChIP HepG2 ENCFF905UTT 400 bp overlap
ZNF3 2 datasets
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 156 bp overlap
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 245 bp overlap
ZNF331 1 dataset
ChIP HepG2 ENCFF842SZN 236 bp overlap
ZNF335 2 datasets
ChIP HepG2 ENCFF539IIQ 462 bp overlap
ChIP HepG2 ENCFF539IIQ 265 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 153 bp overlap
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 89 bp overlap
ZNF827 2 datasets
ChIP HepG2 ENCFF591ZUK 115 bp overlap
ChIP HepG2 ENCFF591ZUK 340 bp overlap
ZSCAN12 1 dataset
ChIP HepG2 ENCFF491QKS 337 bp overlap
ZSCAN30 1 dataset
ChIP HepG2 ENCFF093LBM 402 bp overlap