chr1 : 78,091,315 78,091,731
416 bp 144 TFs 1 linked gene
This 416 bp open chromatin element is linked to ENSG00000213560 and is bound by 144 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000213560 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:78,086,315 – 78,096,731
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
144 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 206 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 270 bp overlap
ChIP K562 ENCFF938UXQ 185 bp overlap
ARNT 4 datasets
ChIP K-562 ENCSR613NUC.ARNT.K-562 154 bp overlap
ChIP K562 ENCFF451RAF 237 bp overlap
ChIP K562 ENCFF451RAF 416 bp overlap
ChIP K562 ENCFF451RAF 242 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 195 bp overlap
ATF7 3 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 182 bp overlap
ChIP K562 ENCFF308SKS 350 bp overlap
ChIP K562 ENCFF308SKS 416 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 140 bp overlap
BHLHE40 2 datasets
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 154 bp overlap
ChIP K562 ENCFF923NJI 220 bp overlap
BRD2 7 datasets
ChIP K-562 GSE140325.BRD2.K-562 114 bp overlap
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 355 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 234 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD2.K-562_dilution-6-100 200 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 225 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD2.K-562_iBET-BD2-IFNG 318 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 322 bp overlap
BRD3 5 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 326 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 260 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 219 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 283 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 350 bp overlap
BRD4 7 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 317 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 300 bp overlap
ChIP K-562_JQ1_2h GSE99178.BRD4.K-562_JQ1_2h 86 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 315 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 354 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 327 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 249 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 163 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 220 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 103 bp overlap
ChIP K562 ENCFF673OEZ 139 bp overlap
CBX5 1 dataset
ChIP K-562 ENCSR272JAT.CBX5.K-562 128 bp overlap
CCNT2 1 dataset
ChIP K562 ENCFF199GSZ 343 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 162 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 111 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 342 bp overlap
ChIP K562 ENCFF403WPG 416 bp overlap
CTCF 1 dataset
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 396 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 205 bp overlap
ChIP K562 ENCFF775HUO 161 bp overlap
E2F3 1 dataset
Motif DE_12h DE_12h-E2F3_MA0469.4 14 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 209 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 196 bp overlap
ChIP K562 ENCFF053BWO 274 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 195 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 274 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 190 bp overlap
ChIP K562 ENCFF226VMS 257 bp overlap
ERF 1 dataset
ChIP K562 ENCFF626IQJ 337 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 218 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 242 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 298 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 243 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR508DQA.FOXK2.K-562 230 bp overlap
FOXM1 2 datasets
ChIP K562 ENCFF255RHV 323 bp overlap
ChIP K562 ENCFF255RHV 305 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
GATA1 6 datasets
ChIP K-562 ENCSR000EFT.GATA1.K-562 187 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 248 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 166 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 201 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 202 bp overlap
ChIP K562 ENCFF094CMK 227 bp overlap
GATA2 10 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 225 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 196 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 150 bp overlap
ChIP K562 ENCFF088XQT 256 bp overlap
ChIP K562 ENCFF088XQT 350 bp overlap
ChIP K562 ENCFF513FTZ 259 bp overlap
ChIP K562 ENCFF544PCK 213 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 314 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 53 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 239 bp overlap
GFI1B 3 datasets
ChIP K-562 GSE117944.GFI1B.K-562 164 bp overlap
ChIP K-562 ENCSR509GDT.GFI1B.K-562 163 bp overlap
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 171 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 344 bp overlap
ChIP K562 ENCFF968WBH 322 bp overlap
ChIP K562 ENCFF968WBH 416 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 234 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 155 bp overlap
ChIP K562 ENCFF744ALD 260 bp overlap
ChIP K562 ENCFF919OMP 334 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 112 bp overlap
ChIP K562 ENCFF317JJX 281 bp overlap
HNRNPLL 2 datasets
ChIP K-562 GSE120104.HNRNPLL.K-562 215 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 209 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 416 bp overlap
ChIP K562 ENCFF348IBL 355 bp overlap
ChIP K562 ENCFF771OHZ 264 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 416 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
JUN 1 dataset
ChIP K-562 ENCSR000EFS.JUN.K-562 146 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 187 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 198 bp overlap
ChIP K562 ENCFF830LVJ 249 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 263 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 227 bp overlap
ChIP K562 ENCFF128TYE 261 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 285 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 321 bp overlap
ChIP K562 ENCFF320EQC 411 bp overlap
LCOR 1 dataset
ChIP K562 ENCFF340MHH 370 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 218 bp overlap
LEF1 2 datasets
ChIP K-562 ENCSR343ELW.LEF1.K-562 134 bp overlap
ChIP K562 ENCFF198WCP 287 bp overlap
MAFK 2 datasets
ChIP K-562 ENCSR000EGX.MAFK.K-562 104 bp overlap
ChIP K562 ENCFF380WHM 173 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 209 bp overlap
MAZ 3 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 212 bp overlap
ChIP K-562 ENCSR163IUV.MAZ.K-562 176 bp overlap
ChIP K562 ENCFF809XHP 340 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 416 bp overlap
MTA3 3 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 200 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 199 bp overlap
ChIP K562 ENCFF289UFB 416 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 125 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 129 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 181 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF788MPU 225 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 284 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 281 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 139 bp overlap
ChIP K562 ENCFF163BSI 196 bp overlap
NFIB 2 datasets
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NFRKB 3 datasets
ChIP K-562 ENCSR657EOF.NFRKB.K-562 416 bp overlap
ChIP K562 ENCFF057YFW 290 bp overlap
ChIP K562 ENCFF057YFW 416 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 128 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 214 bp overlap
NR2C2 3 datasets
ChIP K562 ENCFF750AXF 83 bp overlap
ChIP K562 ENCFF750AXF 315 bp overlap
ChIP K562 ENCFF750AXF 416 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 165 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
NR4A1 1 dataset
ChIP K562 ENCFF679FCN 311 bp overlap
NRF1 3 datasets
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 114 bp overlap
ChIP K562 ENCFF689EWI 416 bp overlap
ChIP K562 ENCFF791UHF 347 bp overlap
PHF8 1 dataset
ChIP K562 ENCFF217UCA 416 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 166 bp overlap
POLR2A 2 datasets
ChIP K562 ENCFF419GHN 416 bp overlap
ChIP spleen ENCFF706IUS 416 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 290 bp overlap
ChIP K562 ENCFF648YPL 291 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 103 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 1 dataset
ChIP K562 ENCFF634XYR 304 bp overlap
RBFOX2 4 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 324 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 324 bp overlap
ChIP K562 ENCFF196WTG 335 bp overlap
ChIP K562 ENCFF967GRF 342 bp overlap
RCOR1 3 datasets
ChIP K-562 ENCSR000EGC.RCOR1.K-562 217 bp overlap
ChIP K562 ENCFF216EEJ 118 bp overlap
ChIP K562 ENCFF721RTS 245 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 298 bp overlap
REST 2 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 130 bp overlap
ChIP K562 ENCFF430APM 231 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 416 bp overlap
SKIL 2 datasets
ChIP K562 ENCFF560QSF 321 bp overlap
ChIP K562 ENCFF560QSF 416 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 404 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 240 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 248 bp overlap
ChIP K562 ENCFF316MCJ 277 bp overlap
ChIP K562 ENCFF506JCB 376 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 143 bp overlap
ChIP K562 ENCFF690CFF 314 bp overlap
SMC3 1 dataset
ChIP K562 ENCFF582XIX 265 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 206 bp overlap
ChIP K562 ENCFF059YCJ 299 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP macrophage_IL4 GSE47188.SPI1.macrophage_IL4 292 bp overlap
SRF 1 dataset
ChIP K-562 ENCSR582IAO.SRF.K-562 129 bp overlap
STAT6 1 dataset
ChIP K562 ENCFF444HZW 138 bp overlap
TAL1 8 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 149 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 201 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 153 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 201 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 164 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 161 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 150 bp overlap
ChIP K562 ENCFF661CCK 178 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 302 bp overlap
TBP 2 datasets
ChIP K-562 GSE55306.TBP.K-562 328 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 202 bp overlap
TCF12 1 dataset
ChIP K-562 ENCSR744WOO.TCF12.K-562 153 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 161 bp overlap
ChIP K562 ENCFF319QZT 248 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 291 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap
TRIM28 3 datasets
ChIP K-562 ENCSR000BRW.TRIM28.K-562 162 bp overlap
ChIP K562 ENCFF172UPN 287 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 138 bp overlap
Tcf21 1 dataset
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
UBTF 4 datasets
ChIP K-562 ENCSR000EFZ.UBTF.K-562 272 bp overlap
ChIP K-562 ENCSR000EFW.UBTF.K-562 294 bp overlap
ChIP K562 ENCFF174SPM 349 bp overlap
ChIP K562 ENCFF775DLK 310 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 212 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 149 bp overlap
YY1 6 datasets
ChIP H1 ENCFF524BTL 334 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 272 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 223 bp overlap
ChIP K-562 ENCSR000EWF.YY1.K-562 135 bp overlap
ChIP K562 ENCFF660QRE 311 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 191 bp overlap
ZBED4 2 datasets
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 330 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 270 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 170 bp overlap
ChIP K562 ENCFF255RZG 208 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 315 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 152 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap