chr6 : 26,319,763 26,320,151
388 bp 149 TFs 1 linked gene
This 388 bp open chromatin element is linked to H3C9P and is bound by 149 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
H3C9P 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:26,314,763 – 26,325,151
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
149 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K-562 ENCSR440VKE.ADNP.K-562 314 bp overlap
ARID2 2 datasets
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 306 bp overlap
ChIP HepG2 ENCFF317ZHO 177 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 273 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 356 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 388 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 165 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 177 bp overlap
BCOR 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 144 bp overlap
ChIP K562 ENCFF343XWA 178 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 308 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 369 bp overlap
BHLHE40 2 datasets
ChIP K562 ENCFF923NJI 101 bp overlap
ChIP K562 ENCFF923NJI 311 bp overlap
BRD2 4 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 290 bp overlap
ChIP K-562_DMSO GSE120715.BRD2.K-562_DMSO 164 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 321 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD2.K-562_IBET151_50nM 251 bp overlap
BRD3 3 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 332 bp overlap
ChIP K-562_DMSO GSE120715.BRD3.K-562_DMSO 285 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 322 bp overlap
BRD4 9 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 264 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 147 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 328 bp overlap
ChIP K-562_DMSO GSE120715.BRD4.K-562_DMSO 247 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 377 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD4.K-562_IBET151_50nM 186 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 202 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 342 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 132 bp overlap
CC2D1A 1 dataset
ChIP K562 ENCFF567XUT 144 bp overlap
CHD1 3 datasets
ChIP H1 ENCFF998XEK 388 bp overlap
ChIP H1 ENCFF998XEK 189 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 290 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 127 bp overlap
CTCF 3 datasets
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 81 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 132 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 106 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 162 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 182 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF739JDE 114 bp overlap
DR1 1 dataset
ChIP Hep-G2 ENCSR185AYQ.DR1.Hep-G2 186 bp overlap
E2F4 1 dataset
ChIP HepG2 ENCFF311TOD 333 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 51 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 180 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 191 bp overlap
ELF1 2 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 136 bp overlap
ChIP K562 ENCFF886KFV 215 bp overlap
EZH2 1 dataset
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 204 bp overlap
FOSL1 2 datasets
ChIP K562 ENCFF455MKD 53 bp overlap
ChIP K562 ENCFF455MKD 308 bp overlap
FOXA1 1 dataset
ChIP HepG2 ENCFF740VZW 93 bp overlap
FOXA2 4 datasets
ChIP HepG2 ENCFF533COJ 79 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 151 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 129 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 71 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 141 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 246 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 178 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF485ALN 219 bp overlap
GTF3C2 3 datasets
ChIP H9 GSE94418.GTF3C2.H9 331 bp overlap
ChIP K-562 ENCSR000DOD.GTF3C2.K-562 164 bp overlap
ChIP K562 ENCFF396ZJP 84 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 214 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR000BMG.HDAC2.K-562 149 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 245 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 99 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 143 bp overlap
HEY1 1 dataset
ChIP K562 ENCFF431CYU 277 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 348 bp overlap
ChIP K562 ENCFF055GAZ 325 bp overlap
ChIP K562 ENCFF317JJX 309 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 138 bp overlap
HMGXB4 7 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 253 bp overlap
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 303 bp overlap
ChIP HepG2 ENCFF032DND 192 bp overlap
ChIP HepG2 ENCFF032DND 388 bp overlap
ChIP HepG2 ENCFF032DND 388 bp overlap
ChIP HepG2 ENCFF179TAD 58 bp overlap
ChIP HepG2 ENCFF179TAD 388 bp overlap
HNRNPLL 4 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 291 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 291 bp overlap
ChIP K562 ENCFF541ZGX 74 bp overlap
ChIP K562 ENCFF598PWW 74 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 190 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 155 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 388 bp overlap
ChIP K562 ENCFF348IBL 269 bp overlap
ChIP K562 ENCFF771OHZ 216 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 218 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 275 bp overlap
KDM1A 4 datasets
ChIP H1 ENCFF696SGD 385 bp overlap
ChIP H1 ENCFF696SGD 262 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 129 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 257 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 258 bp overlap
ChIP H1 ENCFF078LED 388 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 296 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 253 bp overlap
KDM5B 2 datasets
ChIP K562 ENCFF049WWX 88 bp overlap
ChIP K562 ENCFF049WWX 388 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 69 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 198 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 230 bp overlap
MAZ 3 datasets
ChIP K-562 ENCSR163IUV.MAZ.K-562 248 bp overlap
ChIP K562 ENCFF809XHP 388 bp overlap
ChIP K562 ENCFF809XHP 257 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 203 bp overlap
MEF2D 1 dataset
ChIP HepG2 ENCFF576WDO 101 bp overlap
MEIS1 2 datasets
ChIP HepG2 ENCFF706DID 257 bp overlap
ChIP HepG2 ENCFF706DID 388 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 59 bp overlap
MLLT1 4 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 91 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 166 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 73 bp overlap
ChIP K562 ENCFF074XRJ 81 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 55 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 282 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 245 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 185 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 277 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 111 bp overlap
NFRKB 3 datasets
ChIP K-562 ENCSR657EOF.NFRKB.K-562 154 bp overlap
ChIP K562 ENCFF057YFW 357 bp overlap
ChIP K562 ENCFF057YFW 326 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
NR6A1 1 dataset
Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF130SGK 186 bp overlap
NUFIP1 1 dataset
ChIP K562 ENCFF119BQA 337 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 329 bp overlap
PHF8 4 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 202 bp overlap
ChIP K-562 ENCSR000AQH.PHF8.K-562 221 bp overlap
ChIP K562 ENCFF217UCA 388 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 192 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 281 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 140 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 382 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 349 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 314 bp overlap
RAD21 1 dataset
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 332 bp overlap
ChIP K562 ENCFF070CVK 267 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 350 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 388 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 141 bp overlap
ChIP K562 ENCFF967GRF 128 bp overlap
RBM39 1 dataset
ChIP K-562 GSE120104.RBM39.K-562 184 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 208 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 94 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 219 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 276 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SAP130 2 datasets
ChIP HepG2 ENCFF892EHZ 93 bp overlap
ChIP HepG2 ENCFF892EHZ 308 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 289 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 185 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 172 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMARCA4 3 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 195 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 178 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 217 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 152 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 309 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 163 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 132 bp overlap
SPI1 11 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 246 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 184 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 163 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 209 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 275 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 220 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 202 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 219 bp overlap
ChIP K562 ENCFF410ORC 144 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 163 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 205 bp overlap
SRF 1 dataset
ChIP K562 ENCFF766EOO 388 bp overlap
TAF1 2 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 122 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 99 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 105 bp overlap
TAF9B 1 dataset
ChIP K562 ENCFF121ZIF 63 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 148 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 321 bp overlap
TBX2 1 dataset
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 195 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 167 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 231 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 306 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 121 bp overlap
YEATS2 2 datasets
ChIP HepG2 ENCFF409XOA 145 bp overlap
ChIP HepG2 ENCFF409XOA 355 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 95 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 95 bp overlap
ZBTB10 1 dataset
ChIP HepG2 ENCFF916WXO 146 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 182 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 61 bp overlap
ZFX 5 datasets
ChIP HepG2 ENCFF016NZF 136 bp overlap
ChIP K-562 ENCSR920ASP.ZFX.K-562 208 bp overlap
ChIP K562 ENCFF169LZT 110 bp overlap
ChIP K562 ENCFF536AJO 388 bp overlap
ChIP K562 ENCFF536AJO 388 bp overlap
ZNF12 1 dataset
ChIP K-562 ENCSR041YBR.ZNF12.K-562 260 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF18 1 dataset
ChIP K-562 GSE97661.ZNF18.K-562 98 bp overlap
ZNF217 1 dataset
ChIP HepG2 ENCFF455XGO 87 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 340 bp overlap
ZNF24 3 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 144 bp overlap
ChIP K562 ENCFF615YYW 231 bp overlap
ChIP K562 ENCFF877JCX 52 bp overlap
ZNF275 1 dataset
ChIP HepG2 ENCFF015JKD 388 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 108 bp overlap
ZNF512 2 datasets
ChIP K562 ENCFF455WDH 114 bp overlap
ChIP K562 ENCFF601EMZ 99 bp overlap
ZNF574 2 datasets
ChIP HepG2 ENCFF206MMY 75 bp overlap
ChIP HepG2 ENCFF206MMY 388 bp overlap
ZNF589 2 datasets
ChIP K562 ENCFF770FHN 388 bp overlap
ChIP K562 ENCFF770FHN 326 bp overlap
ZNF7 2 datasets
ChIP K562 ENCFF096OHS 241 bp overlap
ChIP K562 ENCFF096OHS 264 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 309 bp overlap
ZNF792 1 dataset
ChIP HepG2 ENCFF825WPU 121 bp overlap
ZSCAN29 5 datasets
ChIP HepG2 ENCFF212SBM 238 bp overlap
ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 388 bp overlap
ChIP K562 ENCFF797SOU 210 bp overlap
ChIP K562 ENCFF797SOU 210 bp overlap
ChIP K562 ENCFF842XOY 293 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 118 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 83 bp overlap