chr15:88,537,723–88,539,073

chr15 : 88,537,723 – 88,539,073

1,350 bp 141 TFs 6 linked genes

This 1.4 kb open chromatin element is linked to 6 target genes and is bound by 141 transcription factors.

Linked Genes

6 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000173867		7.5 kb	Proximal	Proximity
DET1		7.6 kb	Proximal	Proximity
LINC01586		66.4 kb	Distal	Multiome
MRPS11		71.0 kb	Distal	Multiome
MRPL46		71.3 kb	Distal	Multiome
AEN		82.7 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

141 transcription factors

ChIP K562 ENCFF817JQF 691 bp overlap

ChIP K562 ENCFF030XBX 301 bp overlap

BACH1 1 dataset

ChIP K-562 ENCSR740NPG.BACH1.K-562 380 bp overlap

BCL6 2 datasets

ChIP K-562 ENCSR802AHH.BCL6.K-562 207 bp overlap

ChIP K562 ENCFF501MST 297 bp overlap

BRD2 2 datasets

ChIP K-562 GSE140325.BRD2.K-562 135 bp overlap

ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 52 bp overlap

BRD3 3 datasets

ChIP H-1_DE GSE126661.BRD3.H-1_DE 438 bp overlap

ChIP H-1_DE GSE126661.BRD3.H-1_DE 182 bp overlap

ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 454 bp overlap

BRD4 6 datasets

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 272 bp overlap

ChIP COLO-741 GSE73319.BRD4.COLO-741 164 bp overlap

ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 136 bp overlap

ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 444 bp overlap

ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 413 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 104 bp overlap

CAVIN1 1 dataset

ChIP K562 ENCFF731YBD 341 bp overlap

CEBPA 1 dataset

ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 211 bp overlap

CLOCK 1 dataset

ChIP U2OS GSE44236.CLOCK.U2OS 89 bp overlap

CREB1 1 dataset

ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 224 bp overlap

CREB3 2 datasets

ChIP K562 ENCFF985QJI 417 bp overlap

ChIP K562 ENCFF985QJI 417 bp overlap

CREB5 1 dataset

ChIP K562 ENCFF724YOH 341 bp overlap

ChIP GSC23 GSE139416.CTCF.GSC23 70 bp overlap

CXXC5 1 dataset

ChIP K562 ENCFF497CZN 291 bp overlap

DDX20 1 dataset

ChIP K562 ENCFF373BEC 361 bp overlap

DEAF1 1 dataset

ChIP K562 ENCFF944USZ 365 bp overlap

DIDO1 1 dataset

ChIP K562 ENCFF284OXF 377 bp overlap

DMBX1 1 dataset

ChIP K562 ENCFF972HXB 227 bp overlap

ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 271 bp overlap

E2F3 2 datasets

ChIP K-562 ENCSR036QIR.E2F3.K-562 208 bp overlap

ChIP K562 ENCFF922ILX 331 bp overlap

E4F1 2 datasets

ChIP K-562 ENCSR731LHZ.E4F1.K-562 270 bp overlap

ChIP K562 ENCFF622HMZ 601 bp overlap

ChIP K562 ENCFF200OMJ 311 bp overlap

ChIP K562 ENCFF626IQJ 337 bp overlap

ChIP Jurkat GSE49091.ERG.Jurkat 167 bp overlap

ChIP VCaP GSE49091.ERG.VCaP 136 bp overlap

ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 202 bp overlap

ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 236 bp overlap

ChIP K562 ENCFF389WTI 361 bp overlap

FOXA1 1 dataset

ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 112 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 937 bp overlap

ChIP DE DE-FOXA2-2 947 bp overlap

GABPA 2 datasets

ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 227 bp overlap

ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 309 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 269 bp overlap

ChIP DE DE-GATA4-2 822 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 283 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-2 860 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 397 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 545 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 425 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 514 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 402 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 273 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 264 bp overlap

GMEB1 1 dataset

ChIP K562 ENCFF679VBB 325 bp overlap

GRHL2 1 dataset

ChIP T-47D GSE99680.GRHL2.T-47D 114 bp overlap

GTF2A2 2 datasets

ChIP K-562 ENCSR801RPW.GTF2A2.K-562 332 bp overlap

ChIP K562 ENCFF041WRN 617 bp overlap

ChIP K562 ENCFF882TEV 305 bp overlap

HDAC2 1 dataset

ChIP K-562 ENCSR075HTM.HDAC2.K-562 262 bp overlap

HDAC8 1 dataset

ChIP K562 ENCFF784HCJ 417 bp overlap

ChIP K-562 ENCSR197ALX.HDGF.K-562 156 bp overlap

HINFP 1 dataset

ChIP K562 ENCFF361QXJ 297 bp overlap

HIVEP1 1 dataset

ChIP K562 ENCFF983WKN 265 bp overlap

HNRNPUL1 2 datasets

ChIP K-562 ENCSR296MXW.HNRNPUL1.K-562 228 bp overlap

ChIP K-562 GSE120104.HNRNPUL1.K-562 199 bp overlap

HOMEZ 2 datasets

ChIP K-562 ENCSR801JWB.HOMEZ.K-562 261 bp overlap

ChIP K562 ENCFF683DJX 321 bp overlap

ChIP K562 ENCFF158CQE 291 bp overlap

ChIP K-562 ENCSR005NMT.ID3.K-562 466 bp overlap

ChIP K562 ENCFF170RNI 294 bp overlap

IKZF1 3 datasets

ChIP K-562 ENCSR395HWC.IKZF1.K-562 347 bp overlap

ChIP K562 ENCFF348IBL 239 bp overlap

ChIP K562 ENCFF771OHZ 322 bp overlap

ChIP K562 ENCFF055LPP 297 bp overlap

IRF1 3 datasets

ChIP K-562 ENCSR854MCV.IRF1.K-562 356 bp overlap

ChIP K562 ENCFF277KTJ 194 bp overlap

ChIP K562 ENCFF277KTJ 561 bp overlap

ChIP K562 ENCFF346PQL 341 bp overlap

ChIP K-562 ENCSR000DJY.JUNB.K-562 97 bp overlap

KDM4A 1 dataset

ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 129 bp overlap

KLF6 2 datasets

ChIP K-562 ENCSR297CGF.KLF6.K-562 276 bp overlap

ChIP K562 ENCFF948QSP 291 bp overlap

L3MBTL2 1 dataset

ChIP K-562 GSE28162.L3MBTL2.K-562 129 bp overlap

ChIP K562 ENCFF982GSZ 517 bp overlap

ChIP K562 ENCFF741LIL 321 bp overlap

MECOM 2 datasets

ChIP K562 ENCFF773RGL 311 bp overlap

ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 157 bp overlap

ChIP RH4 GSE83726.MED1.RH4 223 bp overlap

MEF2D 3 datasets

ChIP K-562 ENCSR647ZXA.MEF2D.K-562 273 bp overlap

ChIP K562 ENCFF392LDT 421 bp overlap

ChIP K562 ENCFF392LDT 421 bp overlap

ChIP K-562 ENCSR180NCY.MTA3.K-562 206 bp overlap

ChIP K562 ENCFF295NDX 445 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 122 bp overlap

ChIP K562 ENCFF047YKA 405 bp overlap

NFE2L1 1 dataset

ChIP K562 ENCFF138UHK 321 bp overlap

ChIP K562 ENCFF382SJS 301 bp overlap

NFRKB 1 dataset

ChIP K-562 ENCSR657EOF.NFRKB.K-562 55 bp overlap

NFXL1 1 dataset

ChIP K562 ENCFF898RYR 345 bp overlap

NR2C1 2 datasets

ChIP K-562 ENCSR178DEG.NR2C1.K-562 229 bp overlap

ChIP K562 ENCFF568JLK 192 bp overlap

NR2F1 1 dataset

ChIP K-562 ENCSR970NKQ.NR2F1.K-562 303 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHG.NR3C1.A-549 98 bp overlap

NR4A1 4 datasets

ChIP K-562 ENCSR130PDE.NR4A1.K-562 312 bp overlap

ChIP K-562 ENCSR692RET.NR4A1.K-562 184 bp overlap

ChIP K562 ENCFF679FCN 311 bp overlap

ChIP K562 ENCFF998LHF 238 bp overlap

PATZ1 1 dataset

ChIP K562 ENCFF610CJH 341 bp overlap

ChIP K562 ENCFF286KMN 417 bp overlap

ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 397 bp overlap

ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 307 bp overlap

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 168 bp overlap

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 139 bp overlap

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 342 bp overlap

ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 378 bp overlap

POU5F1 2 datasets

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 79 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 128 bp overlap

ChIP K-562 ENCSR126FZN.PTRF.K-562 231 bp overlap

PTTG1 1 dataset

ChIP K562 ENCFF017KRM 357 bp overlap

PYGO2 1 dataset

ChIP K562 ENCFF458IIA 321 bp overlap

ChIP K562 ENCFF892SPR 128 bp overlap

ChIP K562 ENCFF791BQI 277 bp overlap

RREB1 1 dataset

ChIP K562 ENCFF796IEO 351 bp overlap

ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 62 bp overlap

SHOX2 1 dataset

ChIP K-562 ENCSR184IQF.SHOX2.K-562 273 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 623 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 314 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 788 bp overlap

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 155 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 483 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 399 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 583 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1167 bp overlap

SMAD3 2 datasets

ChIP K-562 ENCSR376XAV.SMAD3.K-562 168 bp overlap

ChIP K562 ENCFF885DQE 265 bp overlap

SMAD4 1 dataset

ChIP K562 ENCFF628RBP 278 bp overlap

SMAD5 1 dataset

ChIP K-562 ENCSR000FCD.SMAD5.K-562 103 bp overlap

SMARCA4 1 dataset

ChIP K-562 ENCSR587OQL.SMARCA4.K-562 283 bp overlap

SNAI2 2 datasets

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 86 bp overlap

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 80 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 436 bp overlap

SPI1 2 datasets

ChIP K-562 GSE70482.SPI1.K-562 188 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 100 bp overlap

STAT3 4 datasets

ChIP MCF-7 GSE152203.STAT3.MCF-7 154 bp overlap

ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 181 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 225 bp overlap

ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 116 bp overlap

SUPT5H 2 datasets

ChIP HeLa GSE125534.SUPT5H.HeLa 173 bp overlap

ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 231 bp overlap

TAF7 2 datasets

ChIP K-562 ENCSR000BNM.TAF7.K-562 108 bp overlap

ChIP K562 ENCFF314WLE 331 bp overlap

TBX18 1 dataset

ChIP K562 ENCFF473CJK 351 bp overlap

TEAD1 2 datasets

ChIP K-562 ENCSR591ASD.TEAD1.K-562 164 bp overlap

ChIP K562 ENCFF465AQA 297 bp overlap

TEAD4 4 datasets

ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 214 bp overlap

ChIP H1 ENCFF778PAX 163 bp overlap

ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 202 bp overlap

ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 260 bp overlap

TFCP2 1 dataset

ChIP K562 ENCFF984WXL 331 bp overlap

TFDP1 1 dataset

ChIP K-562 ENCSR017GBO.TFDP1.K-562 281 bp overlap

ChIP K562 ENCFF620NFN 291 bp overlap

TSHZ1 2 datasets

ChIP K-562 ENCSR958JPH.TSHZ1.K-562 193 bp overlap

ChIP K562 ENCFF289XHG 277 bp overlap

ZBTB12 2 datasets

ChIP K-562 ENCSR172OSX.ZBTB12.K-562 205 bp overlap

ChIP K562 ENCFF933CVM 331 bp overlap

ZBTB17 1 dataset

ChIP K562 ENCFF731UTU 445 bp overlap

ZBTB9 1 dataset

ChIP K562 ENCFF233EFX 397 bp overlap

ZKSCAN3 1 dataset

ChIP K562 ENCFF709FGV 345 bp overlap

ZNF134 1 dataset

ChIP K562 ENCFF502NWS 345 bp overlap

ZNF143 1 dataset

ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 136 bp overlap

ZNF165 1 dataset

ChIP K562 ENCFF039BMN 341 bp overlap

ZNF175 1 dataset

ChIP K-562 ENCSR011PEI.ZNF175.K-562 270 bp overlap

ZNF197 1 dataset

ChIP K562 ENCFF872BAU 681 bp overlap

ZNF215 2 datasets

ChIP K-562 ENCSR699RWG.ZNF215.K-562 324 bp overlap

ChIP K562 ENCFF317MOH 180 bp overlap

ZNF239 2 datasets

ChIP K-562 ENCSR606KTL.ZNF239.K-562 238 bp overlap

ChIP K562 ENCFF703IKI 331 bp overlap

ZNF24 1 dataset

ChIP K562 ENCFF497GLV 425 bp overlap

ZNF257 1 dataset

ChIP K562 ENCFF849YZP 261 bp overlap

ZNF281 1 dataset

ChIP K562 ENCFF594VNM 255 bp overlap

ZNF311 2 datasets

ChIP K-562 ENCSR388ZRV.ZNF311.K-562 246 bp overlap

ChIP K562 ENCFF986QSP 365 bp overlap

ZNF322 1 dataset

ChIP HEK293 GSE76494.ZNF322.HEK293 156 bp overlap

ZNF324 1 dataset

ChIP K562 ENCFF702GEM 337 bp overlap

ZNF347 1 dataset

ChIP K562 ENCFF447FCS 325 bp overlap

ZNF354B 1 dataset

ChIP K562 ENCFF955JQT 505 bp overlap

ZNF395 4 datasets

ChIP K-562 ENCSR462QZZ.ZNF395.K-562 232 bp overlap

ChIP K562 ENCFF464EIT 781 bp overlap

ChIP K562 ENCFF464EIT 781 bp overlap

ChIP K562 ENCFF464EIT 605 bp overlap

ZNF398 1 dataset

ChIP K562 ENCFF664RQO 297 bp overlap

ZNF41 2 datasets

ChIP K-562 ENCSR235PYI.ZNF41.K-562 193 bp overlap

ChIP K562 ENCFF693FMG 277 bp overlap

ZNF444 1 dataset

ChIP K562 ENCFF329VCH 317 bp overlap

ZNF445 1 dataset

ChIP K562 ENCFF939SEG 325 bp overlap

ZNF449 1 dataset

ChIP K562 ENCFF038VEZ 305 bp overlap

ZNF507 2 datasets

ChIP K-562 ENCSR577KQD.ZNF507.K-562 212 bp overlap

ChIP K562 ENCFF235JOG 261 bp overlap

ZNF57 1 dataset

ChIP K562 ENCFF527CQA 261 bp overlap

ZNF583 2 datasets

ChIP K-562 ENCSR775EQV.ZNF583.K-562 196 bp overlap

ChIP K562 ENCFF879KXH 357 bp overlap

ZNF592 1 dataset

ChIP K562 ENCFF547OSS 580 bp overlap

ZNF644 1 dataset

ChIP K-562 ENCSR729HVR.ZNF644.K-562 285 bp overlap

ZNF668 1 dataset

ChIP K562 ENCFF112IUE 301 bp overlap

ZNF695 1 dataset

ChIP K562 ENCFF648DBO 305 bp overlap

ZNF700 1 dataset

ChIP K562 ENCFF657OXY 305 bp overlap

ZNF707 1 dataset

ChIP K562 ENCFF243WRW 301 bp overlap

ZNF740 3 datasets

ChIP K-562 ENCSR532EMP.ZNF740.K-562 287 bp overlap

ChIP K562 ENCFF447IXE 201 bp overlap

ChIP K562 ENCFF447IXE 637 bp overlap

ZNF75A 1 dataset

ChIP K562 ENCFF410JIO 345 bp overlap

ZNF76 1 dataset

ChIP K562 ENCFF267KQX 361 bp overlap

ZNF79 1 dataset

ChIP K562 ENCFF558WWN 305 bp overlap

ZNF830 1 dataset

ChIP K562 ENCFF958IPC 357 bp overlap

ZSCAN16 1 dataset

ChIP HEK293 GSE76494.ZSCAN16.HEK293 185 bp overlap