chr15 : 56,732,155 56,732,493
338 bp 125 TFs 2 linked genes
This 338 bp open chromatin element is linked to ZNF280D and ENSG00000274667 and is bound by 125 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZNF280D 1.1 kb Proximal Proximity
ENSG00000274667 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:56,727,155 – 56,737,493
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 78 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 272 bp overlap
AR 1 dataset
ChIP prostate GSE56288.AR.prostate 162 bp overlap
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 228 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 200 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 119 bp overlap
ASH2L 1 dataset
ChIP HepG2 ENCFF207QHL 105 bp overlap
ATF2 3 datasets
ChIP K-562 ENCSR869IUD.ATF2.K-562 209 bp overlap
ChIP K562 ENCFF139ZZG 250 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 159 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 223 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 186 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 330 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 137 bp overlap
BRD2 6 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 295 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 234 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD2.K-562_IBET151_50nM 150 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 60 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 159 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 153 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 330 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 230 bp overlap
BRD4 18 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 338 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 80 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 99 bp overlap
ChIP DND41 GSE54379.BRD4.DND41 188 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 93 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 314 bp overlap
ChIP K562 ENCFF092PWQ 323 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 338 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 296 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 57 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 57 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 173 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 338 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 171 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 160 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 205 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 224 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 141 bp overlap
CDK2 1 dataset
ChIP T-47D_PROGESTIN_5M GSE53855.CDK2.T-47D_PROGESTIN_5M 181 bp overlap
CDK8 1 dataset
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 77 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 273 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 269 bp overlap
CHD1 2 datasets
ChIP LNCaP GSE64528.CHD1.LNCaP 275 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 60 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 240 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 174 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 338 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 187 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 184 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 57 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF829RWA 214 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 169 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 150 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 264 bp overlap
EZH2 1 dataset
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 53 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 338 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 260 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 141 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 267 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 232 bp overlap
GATA2 5 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 151 bp overlap
ChIP SH-SY5Y ENCFF485YIB 282 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 281 bp overlap
ChIP SK-N-SH ENCFF764OZD 312 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 167 bp overlap
GATA3 5 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 311 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 311 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 242 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 256 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 322 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 292 bp overlap
ChIP DE DE-GATA4-2 317 bp overlap
GATA6 2 datasets
ChIP AGS GSE51705.GATA6.AGS 132 bp overlap
ChIP DE DE-GATA6-2 285 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 320 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 193 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 338 bp overlap
ChIP K562 ENCFF872AQB 316 bp overlap
ChIP K562 ENCFF968WBH 338 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 200 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 291 bp overlap
HNF4A 2 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
ChIP liver ENCFF449HPV 93 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 185 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 338 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 195 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 200 bp overlap
JUN 1 dataset
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 86 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 165 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 128 bp overlap
KMT2A 5 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 161 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 86 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 108 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 338 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 235 bp overlap
LEF1 2 datasets
ChIP K562 ENCFF198WCP 318 bp overlap
ChIP K562 ENCFF889WGL 302 bp overlap
MED1 3 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 51 bp overlap
ChIP Jurkat GSE59657.MED1.Jurkat 243 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 214 bp overlap
MED12 1 dataset
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 103 bp overlap
MEN1 3 datasets
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 338 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 338 bp overlap
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 338 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 261 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 183 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 321 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 238 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 331 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 281 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 210 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 326 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 123 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 338 bp overlap
NCOR1 1 dataset
ChIP OCI-Ly1 GSE29282.NCOR1.OCI-Ly1 138 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 114 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 146 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 182 bp overlap
NFATC2 1 dataset
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 163 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 206 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 337 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 338 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 126 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 192 bp overlap
ChIP K562 ENCFF674RQA 338 bp overlap
NSD2 2 datasets
ChIP K-562 ENCSR000AVE.NSD2.K-562 168 bp overlap
ChIP K562 ENCFF571LTZ 215 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 228 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 338 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 302 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 338 bp overlap
POLR2A 5 datasets
ChIP GM12891 ENCFF379FCI 338 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 251 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 143 bp overlap
ChIP prostate gland ENCFF832RQK 305 bp overlap
ChIP vagina ENCFF305NWS 338 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 338 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 162 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 100 bp overlap
RAD21 1 dataset
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 338 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 215 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 327 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 290 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 244 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 91 bp overlap
REST 1 dataset
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 152 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 317 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 286 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 278 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 174 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 145 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 120 bp overlap
SMARCA4 8 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 338 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 338 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 332 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 338 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 177 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 128 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 338 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 256 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 226 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 198 bp overlap
SOX2 3 datasets
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 219 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 235 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 189 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 234 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 108 bp overlap
SUPT5H 4 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 204 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 137 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 213 bp overlap
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 143 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 244 bp overlap
TAF1 3 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 191 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 139 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 83 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 115 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 338 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 166 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 265 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 85 bp overlap
TCF7 3 datasets
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 134 bp overlap
ChIP K-562 ENCSR863KUB.TCF7.K-562 196 bp overlap
ChIP K562 ENCFF372PUR 302 bp overlap
TCF7L2 4 datasets
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 124 bp overlap
ChIP HEK293 ENCFF513JQN 338 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 309 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 288 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 202 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 154 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 193 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 97 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 97 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 182 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 338 bp overlap
ChIP K562 ENCFF337GJB 58 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 95 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 227 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 272 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 335 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 278 bp overlap
ZNF362 1 dataset
ChIP HepG2 ENCFF256AZN 177 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 198 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 205 bp overlap
ZNF782 1 dataset
ChIP HepG2 ENCFF449SAF 55 bp overlap