chr6 : 39,225,603 39,225,944
341 bp 137 TFs 1 linked gene
This 341 bp open chromatin element is linked to KCNK5 and is bound by 137 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KCNK5 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:39,220,603 – 39,230,944
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
137 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 113 bp overlap
ATF1 2 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 136 bp overlap
ChIP K562 ENCFF817JQF 332 bp overlap
ATF3 3 datasets
ChIP liver ENCFF375GID 314 bp overlap
ChIP liver ENCFF867MFZ 243 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 198 bp overlap
ATF7 3 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 341 bp overlap
ChIP K562 ENCFF308SKS 302 bp overlap
ChIP K562 ENCFF308SKS 341 bp overlap
BACH1 1 dataset
ChIP K562 ENCFF419VIM 104 bp overlap
BCL11A 10 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 127 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 99 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 139 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 145 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 120 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 196 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 148 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 134 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 118 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 141 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 297 bp overlap
BRD2 6 datasets
ChIP K-562 GSE140325.BRD2.K-562 146 bp overlap
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 341 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 341 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 167 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 74 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 299 bp overlap
BRD3 4 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 341 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 341 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 218 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 289 bp overlap
BRD4 6 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 303 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 341 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 341 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 230 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 341 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 275 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 179 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 182 bp overlap
CEBPB 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 54 bp overlap
CHD4 1 dataset
ChIP K-562 ENCSR000ATL.CHD4.K-562 90 bp overlap
CREB3 2 datasets
ChIP K-562 ENCSR093FKD.CREB3.K-562 53 bp overlap
ChIP K562 ENCFF985QJI 57 bp overlap
CREB3L1 1 dataset
ChIP K562 ENCFF701TVD 98 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 93 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 201 bp overlap
CTCF 2 datasets
ChIP Peyer's patch ENCFF701KWW 291 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 211 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF902MYN 341 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 76 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 341 bp overlap
ChIP K562 ENCFF775HUO 112 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF749FMR 135 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 57 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 341 bp overlap
ChIP K562 ENCFF622HMZ 211 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 217 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 147 bp overlap
ESR1 3 datasets
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 200 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 218 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 289 bp overlap
EZH2 1 dataset
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 316 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 155 bp overlap
FOXA1 1 dataset
ChIP liver ERP002306.FOXA1.liver 190 bp overlap
FOXA2 1 dataset
ChIP liver ENCSR310NYI.FOXA2.liver 165 bp overlap
FOXK2 3 datasets
ChIP K-562 ENCSR508DQA.FOXK2.K-562 341 bp overlap
ChIP K-562 ENCSR302AWT.FOXK2.K-562 144 bp overlap
ChIP K562 ENCFF851PFH 273 bp overlap
GATA1 3 datasets
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 111 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 68 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 155 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 291 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 341 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 59 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 208 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 328 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF485ALN 246 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 230 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 128 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 341 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 116 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 172 bp overlap
ChIP K562 ENCFF738SPU 225 bp overlap
HMBOX1 2 datasets
ChIP K562 ENCFF055GAZ 113 bp overlap
ChIP K562 ENCFF317JJX 123 bp overlap
HNF4A 4 datasets
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 193 bp overlap
ChIP liver ENCFF354NRH 315 bp overlap
ChIP liver ENCFF449HPV 305 bp overlap
ChIP liver ERP002306.HNF4A.liver 341 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 269 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 155 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 121 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR854MCV.IRF1.K-562 71 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 155 bp overlap
JUND 4 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 283 bp overlap
ChIP K562 ENCFF830LVJ 281 bp overlap
ChIP liver ENCFF007WWT 314 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 258 bp overlap
KDM1A 2 datasets
ChIP K562 ENCFF128TYE 139 bp overlap
ChIP K562 ENCFF934ZRG 90 bp overlap
KDM5B 2 datasets
ChIP K562 ENCFF049WWX 341 bp overlap
ChIP K562 ENCFF049WWX 89 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 263 bp overlap
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 63 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 262 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 247 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 245 bp overlap
MAFF 1 dataset
ChIP K-562 ENCSR000EGI.MAFF.K-562 156 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 306 bp overlap
MAFK 1 dataset
ChIP K-562 ENCSR000EGX.MAFK.K-562 129 bp overlap
MAX 7 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 196 bp overlap
ChIP K562 ENCFF110LJS 311 bp overlap
ChIP K562 ENCFF524IJO 341 bp overlap
ChIP liver ENCFF092GVW 341 bp overlap
ChIP liver ENCFF584QGB 341 bp overlap
ChIP liver ENCSR521IID.MAX.liver 251 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 165 bp overlap
MAZ 4 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 308 bp overlap
ChIP K-562 ENCSR163IUV.MAZ.K-562 156 bp overlap
ChIP K562 ENCFF333ZIV 338 bp overlap
ChIP K562 ENCFF809XHP 341 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 341 bp overlap
MTA3 3 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 331 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 112 bp overlap
ChIP K562 ENCFF289UFB 195 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 142 bp overlap
MYNN 1 dataset
ChIP K562 ENCFF399UNK 293 bp overlap
NBN 2 datasets
ChIP K-562 ENCSR085QEV.NBN.K-562 317 bp overlap
ChIP K562 ENCFF146YTY 273 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 268 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 240 bp overlap
NFE2 6 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 268 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 248 bp overlap
ChIP K562 ENCFF163BSI 187 bp overlap
ChIP ProEs GSE59087.NFE2.ProEs 123 bp overlap
ChIP erythroid GSE125753.NFE2.erythroid 88 bp overlap
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 86 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR657EOF.NFRKB.K-562 341 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 98 bp overlap
NRF1 2 datasets
ChIP K-562 ENCSR837EYC.NRF1.K-562 115 bp overlap
ChIP K562 ENCFF689EWI 341 bp overlap
POLR2A 8 datasets
ChIP K562 ENCFF137JSF 341 bp overlap
ChIP K562 ENCFF137JSF 211 bp overlap
ChIP K562 ENCFF215CWW 214 bp overlap
ChIP K562 ENCFF419GHN 341 bp overlap
ChIP K562 ENCFF757TUO 341 bp overlap
ChIP Peyer's patch ENCFF767HVN 128 bp overlap
ChIP erythroblast ENCFF498VMR 208 bp overlap
ChIP transverse colon ENCFF610RWV 283 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 170 bp overlap
PRDM10 4 datasets
ChIP HEK293 ENCFF145WQQ 213 bp overlap
ChIP HEK293 ENCFF145WQQ 135 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 313 bp overlap
ChIP K562 ENCFF740YLK 262 bp overlap
RAD21 2 datasets
ChIP liver ENCFF485PAC 341 bp overlap
ChIP liver ENCFF522JHE 341 bp overlap
RBBP5 2 datasets
ChIP K-562 ENCSR000AQI.RBBP5.K-562 130 bp overlap
ChIP K562 ENCFF070CVK 341 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 264 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 192 bp overlap
RBM39 1 dataset
ChIP K-562 GSE120104.RBM39.K-562 74 bp overlap
RBPJ 1 dataset
ChIP K562 ENCFF607OWI 103 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 199 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 120 bp overlap
REST 2 datasets
ChIP liver ENCFF240FWT 318 bp overlap
ChIP liver ENCSR867WPH.REST.liver 238 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 171 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 223 bp overlap
ChIP liver ENCFF807CIA 303 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 198 bp overlap
SKIL 1 dataset
ChIP K-562 ENCSR336DXE.SKIL.K-562 95 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 292 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 340 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 92 bp overlap
SMAD5 3 datasets
ChIP K-562 ENCSR000FCD.SMAD5.K-562 191 bp overlap
ChIP K562 ENCFF941FJJ 337 bp overlap
ChIP K562 ENCFF941FJJ 136 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 214 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 87 bp overlap
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 303 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 213 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 341 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 341 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 282 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 165 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 162 bp overlap
SP1 3 datasets
ChIP K562 ENCFF088XXV 341 bp overlap
ChIP liver ENCFF597LFJ 341 bp overlap
ChIP liver ENCFF769YSM 218 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 341 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 227 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 163 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 130 bp overlap
SRF 1 dataset
ChIP K562 ENCFF766EOO 249 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 270 bp overlap
TAF1 2 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 257 bp overlap
ChIP K562 ENCFF491WAE 335 bp overlap
TBP 1 dataset
ChIP K-562 ENCSR000EHA.TBP.K-562 156 bp overlap
TCF7L2 1 dataset
ChIP K562 ENCFF543OSB 146 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 76 bp overlap
THAP12 1 dataset
ChIP K562 ENCFF453OQF 152 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 144 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 146 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 341 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 174 bp overlap
ChIP K562 ENCFF828QYP 341 bp overlap
YY1 9 datasets
ChIP GM12892 ENCSR000BLT.YY1.GM12892 150 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 118 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 178 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 184 bp overlap
ChIP K562 ENCFF660QRE 147 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 153 bp overlap
ChIP liver ENCFF400MBC 277 bp overlap
ChIP liver ENCFF515BWJ 341 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 331 bp overlap
ZBTB11 2 datasets
ChIP K-562 ENCSR706BJO.ZBTB11.K-562 92 bp overlap
ChIP K562 ENCFF215OUF 341 bp overlap
ZBTB24 1 dataset
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 341 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 137 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 159 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 51 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 157 bp overlap
ChIP K562 ENCFF255RZG 240 bp overlap
ZFP91 1 dataset
ChIP K562 ENCFF501CDP 105 bp overlap
ZFX 2 datasets
ChIP K-562 ENCSR920ASP.ZFX.K-562 199 bp overlap
ChIP K562 ENCFF169LZT 341 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 95 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 73 bp overlap
ChIP K562 ENCFF281INV 156 bp overlap
ZNF317 1 dataset
ChIP K562 ENCFF896LCF 151 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 214 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 341 bp overlap
ZNF347 1 dataset
ChIP K562 ENCFF447FCS 138 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 175 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 265 bp overlap
ZNF589 2 datasets
ChIP K562 ENCFF770FHN 320 bp overlap
ChIP K562 ENCFF770FHN 99 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 105 bp overlap
ZNF830 1 dataset
ChIP K562 ENCFF958IPC 127 bp overlap