chr6 : 52,419,241 52,419,644
403 bp 146 TFs 0 linked genes
This 403 bp open chromatin element has no linked target genes and is bound by 146 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:52,414,241 – 52,424,644
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
146 transcription factors
Source
Cell type
AFF1 3 datasets
ChIP K-562 ENCSR241LIH.AFF1.K-562 137 bp overlap
ChIP K562 ENCFF096RYC 238 bp overlap
ChIP K562 ENCFF583EEH 165 bp overlap
AFF4 1 dataset
ChIP HepG2 ENCFF237BMI 246 bp overlap
ARID2 3 datasets
ChIP HepG2 ENCFF317ZHO 177 bp overlap
ChIP K-562 ENCSR491EBY.ARID2.K-562 162 bp overlap
ChIP K562 ENCFF099BVK 170 bp overlap
ARNT 2 datasets
ChIP K562 ENCFF291CXK 198 bp overlap
ChIP K562 ENCFF451RAF 262 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 231 bp overlap
ASH1L 1 dataset
ChIP K562 ENCFF808EMX 221 bp overlap
ATF4 1 dataset
ChIP K562 ENCFF674KTF 169 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 152 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 339 bp overlap
BRD2 3 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 102 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 100 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 111 bp overlap
BRD3 2 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 199 bp overlap
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 134 bp overlap
BRD4 12 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 207 bp overlap
ChIP COLO-205 GSE73319.BRD4.COLO-205 361 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 113 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 294 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 236 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 232 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 190 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 313 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 313 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 253 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 266 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 64 bp overlap
CCDC6 1 dataset
ChIP HepG2 ENCFF751JSA 316 bp overlap
CDC5L 2 datasets
ChIP K-562 ENCSR121PFY.CDC5L.K-562 144 bp overlap
ChIP K562 ENCFF644OMA 204 bp overlap
CHAMP1 1 dataset
ChIP K562 ENCFF860ZIW 62 bp overlap
CHD1 4 datasets
ChIP H1 ENCFF998XEK 202 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 196 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 85 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 89 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 222 bp overlap
CSDE1 2 datasets
ChIP K562 ENCFF209YQQ 197 bp overlap
ChIP K562 ENCFF313FYC 137 bp overlap
CTCF 2 datasets
ChIP endodermal cell ENCFF471YCZ 255 bp overlap
ChIP endodermal cell ENCFF471YCZ 403 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 258 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 96 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 326 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 166 bp overlap
ChIP K562 ENCFF053BWO 196 bp overlap
ELF1 3 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 176 bp overlap
ChIP K-562 ENCSR502OEK.ELF1.K-562 191 bp overlap
ChIP K562 ENCFF457KVR 294 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF200OMJ 240 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 114 bp overlap
ETS1 1 dataset
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 224 bp overlap
FOXA1 1 dataset
ChIP HepG2 ENCFF600IFL 222 bp overlap
GMEB1 2 datasets
ChIP K-562 ENCSR928KOR.GMEB1.K-562 137 bp overlap
ChIP K562 ENCFF705LHX 229 bp overlap
HBP1 1 dataset
ChIP K562 ENCFF882TEV 145 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 170 bp overlap
ChIP K562 ENCFF928TKZ 88 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 205 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 194 bp overlap
ChIP K562 ENCFF744ALD 252 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 186 bp overlap
HDGF 3 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 394 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 268 bp overlap
ChIP K562 ENCFF682FBH 368 bp overlap
HLTF 1 dataset
ChIP K562 ENCFF783OCM 143 bp overlap
IFNA1 1 dataset
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 108 bp overlap
IKZF1 4 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 299 bp overlap
ChIP K562 ENCFF348IBL 189 bp overlap
ChIP K562 ENCFF771OHZ 233 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 210 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 189 bp overlap
INSM1 1 dataset
Motif DE_72h DE_72h-INSM1_MA0155.1 12 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 333 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 327 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 194 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCSR604VWJ.KLF7.HEK293 65 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 141 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 195 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 251 bp overlap
LARP7 1 dataset
ChIP K562 ENCFF550RPP 185 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF659AVU 229 bp overlap
MCM2 1 dataset
ChIP K562 ENCFF897SNA 213 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 310 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 236 bp overlap
MIER1 2 datasets
ChIP K-562 ENCSR426MDV.MIER1.K-562 167 bp overlap
ChIP K562 ENCFF584AYC 193 bp overlap
MLLT1 5 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 302 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 297 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 124 bp overlap
ChIP K562 ENCFF871DSA 167 bp overlap
ChIP MCF-7 ENCFF198JJP 182 bp overlap
MTA1 2 datasets
ChIP K-562 ENCSR807BGP.MTA1.K-562 155 bp overlap
ChIP K562 ENCFF230ZKA 158 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 131 bp overlap
MTA3 1 dataset
ChIP MCF-7 ENCFF355KAI 185 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 357 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 298 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 346 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 189 bp overlap
NBN 3 datasets
ChIP GM12878 ENCFF213ZNN 316 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 129 bp overlap
ChIP K-562 ENCSR085QEV.NBN.K-562 143 bp overlap
NCOA1 4 datasets
ChIP HepG2 ENCFF624JES 190 bp overlap
ChIP K-562 ENCSR931HNY.NCOA1.K-562 272 bp overlap
ChIP K-562 ENCSR658WFQ.NCOA1.K-562 116 bp overlap
ChIP K562 ENCFF962VHQ 215 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF788MPU 142 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 353 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 237 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 84 bp overlap
ChIP K562 ENCFF078EKB 195 bp overlap
NFRKB 3 datasets
ChIP K-562 ENCSR657EOF.NFRKB.K-562 256 bp overlap
ChIP K562 ENCFF057YFW 75 bp overlap
ChIP K562 ENCFF221WAF 57 bp overlap
NFXL1 1 dataset
ChIP K562 ENCFF619QDE 210 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 156 bp overlap
NKRF 1 dataset
ChIP K562 ENCFF815TQL 142 bp overlap
NR0B2 1 dataset
ChIP HepG2 ENCFF071MVY 143 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF239KMA 282 bp overlap
NR2F1 1 dataset
Motif DE_72h DE_72h-NR2F1_MA0017.3 12 bp overlap
OTX1 1 dataset
ChIP K562 ENCFF829SLD 144 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 118 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 229 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 56 bp overlap
PTBP1 2 datasets
ChIP K-562 ENCSR948KMB.PTBP1.K-562 253 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 263 bp overlap
PYGO2 1 dataset
ChIP K562 ENCFF414HHT 204 bp overlap
RBM39 1 dataset
ChIP K562 ENCFF914PAM 72 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 172 bp overlap
REST 3 datasets
ChIP HEK293 ENCFF073DOT 149 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 129 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 187 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 279 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 128 bp overlap
SMARCA4 6 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 222 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 199 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 145 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 118 bp overlap
ChIP K562 ENCFF316MCJ 190 bp overlap
ChIP K562 ENCFF506JCB 214 bp overlap
SMARCA5 2 datasets
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 367 bp overlap
ChIP K562 ENCFF936KHY 263 bp overlap
SMARCC1 1 dataset
ChIP HeLa-S3 ENCFF971JGA 125 bp overlap
SMARCC2 1 dataset
ChIP K562 ENCFF368GSR 111 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 163 bp overlap
ChIP K562 ENCFF690CFF 199 bp overlap
SNAI1 1 dataset
ChIP HepG2 ENCFF017SIW 68 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 226 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 250 bp overlap
TAL1 1 dataset
ChIP K562 ENCFF620GMX 138 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 222 bp overlap
ChIP MCF-7 ENCSR801SWX.TARDBP.MCF-7 136 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 187 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 323 bp overlap
TEAD4 2 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 149 bp overlap
ChIP H1 ENCFF778PAX 220 bp overlap
THRAP3 1 dataset
ChIP K562 ENCFF445ZEJ 156 bp overlap
TOE1 2 datasets
ChIP HepG2 ENCFF490CXR 372 bp overlap
ChIP K562 ENCFF728FRA 298 bp overlap
TRAFD1 1 dataset
ChIP HepG2 ENCFF355OOY 137 bp overlap
TRIM24 3 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 156 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 137 bp overlap
ChIP K562 ENCFF284DKY 229 bp overlap
TRIM25 2 datasets
ChIP K562 ENCFF376TLP 155 bp overlap
ChIP K562 ENCFF786UTW 155 bp overlap
U2AF2 2 datasets
ChIP Hep-G2 GSE120104.U2AF2.Hep-G2 222 bp overlap
ChIP HepG2 ENCFF687AIT 292 bp overlap
USF3 1 dataset
ChIP HepG2 ENCFF010CPF 69 bp overlap
YBX1 1 dataset
ChIP K562 ENCFF051NKX 124 bp overlap
YBX3 1 dataset
ChIP K562 ENCFF406DBA 201 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 115 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 403 bp overlap
ZBTB2 4 datasets
ChIP HepG2 ENCFF605PMZ 356 bp overlap
ChIP HepG2 ENCFF605PMZ 60 bp overlap
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 183 bp overlap
ChIP K562 ENCFF290ESQ 250 bp overlap
ZBTB26 1 dataset
ChIP K562 ENCFF766TDN 145 bp overlap
ZBTB3 1 dataset
ChIP HepG2 ENCFF224AQL 403 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 382 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 56 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 155 bp overlap
ZBTB5 1 dataset
ChIP K562 ENCFF856PUG 216 bp overlap
ZC3H8 2 datasets
ChIP K562 ENCFF462ENR 172 bp overlap
ChIP K562 ENCFF495URH 133 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 193 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 394 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 194 bp overlap
ZHX1 1 dataset
ChIP HepG2 ENCFF051FGD 74 bp overlap
ZKSCAN1 2 datasets
ChIP MCF-7 ENCFF247MBY 128 bp overlap
ChIP MCF-7 ENCSR449UFF.ZKSCAN1.MCF-7 133 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 242 bp overlap
ZNF135 1 dataset
Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap
ZNF184 3 datasets
ChIP K-562 ENCSR546IHU.ZNF184.K-562 157 bp overlap
ChIP K-562 ENCSR621ATC.ZNF184.K-562 105 bp overlap
ChIP K562 ENCFF579ZRD 198 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 129 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 278 bp overlap
ZNF24 5 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 308 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 275 bp overlap
ChIP K562 ENCFF497GLV 53 bp overlap
ChIP K562 ENCFF615YYW 131 bp overlap
ChIP K562 ENCFF877JCX 124 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF281INV 176 bp overlap
ZNF33B 1 dataset
ChIP HepG2 ENCFF921KSE 195 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 292 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 343 bp overlap
ZNF407 2 datasets
ChIP K-562 ENCSR011NOZ.ZNF407.K-562 161 bp overlap
ChIP K562 ENCFF568QZW 227 bp overlap
ZNF512 5 datasets
ChIP HepG2 ENCFF113IGR 92 bp overlap
ChIP K-562 ENCSR591CCL.ZNF512.K-562 299 bp overlap
ChIP K562 ENCFF455WDH 229 bp overlap
ChIP K562 ENCFF601EMZ 305 bp overlap
ChIP WTC11 ENCFF086TTM 244 bp overlap
ZNF546 1 dataset
ChIP HepG2 ENCFF996NZA 71 bp overlap
ZNF577 1 dataset
ChIP HepG2 ENCFF980BRD 57 bp overlap
ZNF615 1 dataset
ChIP HepG2 ENCFF440YLL 377 bp overlap
ZNF639 3 datasets
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 143 bp overlap
ChIP K-562 ENCSR949NVY.ZNF639.K-562 124 bp overlap
ChIP K562 ENCFF267NLX 269 bp overlap
ZNF670 1 dataset
ChIP HepG2 ENCFF684IKN 108 bp overlap
ZNF687 1 dataset
ChIP MCF-7 ENCFF440BFX 173 bp overlap
ZNF710 1 dataset
ChIP HepG2 ENCFF170JWO 220 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 200 bp overlap
ZSCAN29 1 dataset
ChIP K562 ENCFF797SOU 266 bp overlap
ZZZ3 1 dataset
ChIP K562 ENCFF845XAO 125 bp overlap