chr21 : 42,971,083 – 42,971,680
597 bp 140 TFs 1 linked gene
This 597 bp open chromatin element is linked to PKNOX1 and is bound by 140 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PKNOX1 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:42,966,083 – 42,976,680
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
140 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 132 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 424 bp overlap
ATF4 1 dataset
ChIP K562 ENCFF030XBX 171 bp overlap
BACH1 1 dataset
ChIP K562 ENCFF419VIM 446 bp overlap
BCL6 2 datasets
ChIP K-562 ENCSR802AHH.BCL6.K-562 158 bp overlap
ChIP K562 ENCFF501MST 171 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 194 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 198 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 114 bp overlap
BRD4 2 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 53 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 215 bp overlap
CAVIN1 1 dataset
ChIP K562 ENCFF731YBD 71 bp overlap
CREB3 3 datasets
ChIP K-562 ENCSR093FKD.CREB3.K-562 233 bp overlap
ChIP K562 ENCFF985QJI 170 bp overlap
ChIP K562 ENCFF985QJI 417 bp overlap
CREB5 1 dataset
ChIP K562 ENCFF724YOH 191 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF902MYN 388 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 174 bp overlap
DDX20 2 datasets
ChIP K-562 ENCSR382AIB.DDX20.K-562 222 bp overlap
ChIP K562 ENCFF373BEC 215 bp overlap
DIDO1 3 datasets
ChIP K-562 ENCSR167JBG.DIDO1.K-562 195 bp overlap
ChIP K-562 ENCSR167JBG.DIDO1.K-562 72 bp overlap
ChIP K562 ENCFF284OXF 202 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 166 bp overlap
E2F3 2 datasets
ChIP K-562 ENCSR036QIR.E2F3.K-562 158 bp overlap
ChIP K562 ENCFF922ILX 164 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 387 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 443 bp overlap
ChIP K562 ENCFF622HMZ 413 bp overlap
ELF2 1 dataset
ChIP K562 ENCFF787SME 194 bp overlap
ERF 1 dataset
ChIP K562 ENCFF626IQJ 191 bp overlap
ETV1 2 datasets
ChIP K-562 ENCSR277DMR.ETV1.K-562 149 bp overlap
ChIP K562 ENCFF389WTI 225 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 569 bp overlap
ChIP DE DE-FOXA2-2 455 bp overlap
FOXO4 1 dataset
ChIP K562 ENCFF296NLF 159 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 350 bp overlap
ChIP DE DE-GATA4-2 419 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 409 bp overlap
ChIP DE DE-GATA6-2 448 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 214 bp overlap
GMEB1 2 datasets
ChIP K-562 ENCSR376RCX.GMEB1.K-562 96 bp overlap
ChIP K562 ENCFF679VBB 181 bp overlap
GTF2A2 2 datasets
ChIP K-562 ENCSR801RPW.GTF2A2.K-562 227 bp overlap
ChIP K562 ENCFF041WRN 225 bp overlap
HDAC8 4 datasets
ChIP K-562 ENCSR835TCD.HDAC8.K-562 229 bp overlap
ChIP K-562 ENCSR000DJZ.HDAC8.K-562 129 bp overlap
ChIP K562 ENCFF784HCJ 200 bp overlap
ChIP K562 ENCFF784HCJ 402 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 597 bp overlap
HINFP 2 datasets
ChIP K-562 ENCSR619GFP.HINFP.K-562 187 bp overlap
ChIP K562 ENCFF361QXJ 189 bp overlap
HIVEP1 2 datasets
ChIP K-562 ENCSR947PJZ.HIVEP1.K-562 137 bp overlap
ChIP K562 ENCFF983WKN 209 bp overlap
HNRNPLL 1 dataset
ChIP K562 ENCFF541ZGX 237 bp overlap
HOMEZ 2 datasets
ChIP K-562 ENCSR801JWB.HOMEZ.K-562 115 bp overlap
ChIP K562 ENCFF683DJX 181 bp overlap
HSF4 1 dataset
ChIP K562 ENCFF158CQE 217 bp overlap
ID3 3 datasets
ChIP K-562 ENCSR005NMT.ID3.K-562 275 bp overlap
ChIP K562 ENCFF170RNI 215 bp overlap
ChIP K562 ENCFF277CGB 157 bp overlap
IFI16 1 dataset
ChIP K562 ENCFF291QSI 205 bp overlap
ILK 2 datasets
ChIP K-562 ENCSR648INT.ILK.K-562 203 bp overlap
ChIP K562 ENCFF055LPP 183 bp overlap
IRF1 2 datasets
ChIP K562 ENCFF277KTJ 294 bp overlap
ChIP K562 ENCFF277KTJ 498 bp overlap
IRF9 2 datasets
ChIP K-562 ENCSR926KTP.IRF9.K-562 189 bp overlap
ChIP K562 ENCFF346PQL 211 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 283 bp overlap
KDM5B 1 dataset
ChIP K562 ENCFF049WWX 474 bp overlap
KLF13 2 datasets
ChIP K-562 ENCSR608HVP.KLF13.K-562 188 bp overlap
ChIP K562 ENCFF738YZC 152 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 229 bp overlap
KLF6 2 datasets
ChIP K-562 ENCSR297CGF.KLF6.K-562 199 bp overlap
ChIP K562 ENCFF948QSP 177 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 165 bp overlap
MBD1 1 dataset
ChIP K562 ENCFF741LIL 241 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 224 bp overlap
MEF2D 2 datasets
ChIP K-562 ENCSR647ZXA.MEF2D.K-562 248 bp overlap
ChIP K562 ENCFF392LDT 125 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 130 bp overlap
MTF1 1 dataset
ChIP K562 ENCFF811XMB 128 bp overlap
MXD4 1 dataset
ChIP WTC11 ENCFF044PLT 179 bp overlap
MYC 1 dataset
ChIP K562 ENCFF295NDX 355 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 184 bp overlap
NFE2L1 2 datasets
ChIP K-562 ENCSR632SHZ.NFE2L1.K-562 204 bp overlap
ChIP K562 ENCFF138UHK 202 bp overlap
NFIX 2 datasets
ChIP K-562 ENCSR574VJG.NFIX.K-562 120 bp overlap
ChIP K562 ENCFF382SJS 138 bp overlap
NR2C1 2 datasets
ChIP K-562 ENCSR178DEG.NR2C1.K-562 215 bp overlap
ChIP K562 ENCFF568JLK 208 bp overlap
NR4A1 4 datasets
ChIP K-562 ENCSR130PDE.NR4A1.K-562 292 bp overlap
ChIP K-562 ENCSR000DJW.NR4A1.K-562 74 bp overlap
ChIP K562 ENCFF998LHF 217 bp overlap
ChIP K562 ENCFF998LHF 465 bp overlap
PBX2 3 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 258 bp overlap
ChIP K-562 ENCSR263DFP.PBX2.K-562 193 bp overlap
ChIP K562 ENCFF286KMN 75 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 130 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 352 bp overlap
PRDM10 2 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 229 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 258 bp overlap
PTRF 1 dataset
ChIP K-562 ENCSR126FZN.PTRF.K-562 220 bp overlap
PTTG1 2 datasets
ChIP K-562 ENCSR314BBS.PTTG1.K-562 249 bp overlap
ChIP K562 ENCFF017KRM 149 bp overlap
PYGO2 2 datasets
ChIP K-562 ENCSR410DWC.PYGO2.K-562 204 bp overlap
ChIP K562 ENCFF458IIA 183 bp overlap
RBPJ 1 dataset
ChIP K562 ENCFF607OWI 153 bp overlap
RELA 2 datasets
ChIP K-562 ENCSR772EEN.RELA.K-562 310 bp overlap
ChIP K562 ENCFF892SPR 280 bp overlap
RFX1 5 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 405 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 379 bp overlap
ChIP K562 ENCFF421AVO 323 bp overlap
ChIP K562 ENCFF809XVG 270 bp overlap
ChIP MCF-7 ENCFF782EZS 441 bp overlap
RFX7 1 dataset
ChIP K562 ENCFF791BQI 161 bp overlap
RREB1 2 datasets
ChIP K-562 ENCSR250WFW.RREB1.K-562 94 bp overlap
ChIP K562 ENCFF796IEO 172 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 206 bp overlap
SMAD3 2 datasets
ChIP K-562 ENCSR376XAV.SMAD3.K-562 171 bp overlap
ChIP K562 ENCFF885DQE 146 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 171 bp overlap
SMAD7 1 dataset
ChIP HepG2 ENCFF850FXR 60 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 196 bp overlap
SNAPC5 1 dataset
ChIP K562 ENCFF999JUU 177 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 92 bp overlap
SRF 7 datasets
ChIP GM12878 ENCFF878IIX 397 bp overlap
ChIP GM12878 ENCSR041XML.SRF.GM12878 240 bp overlap
ChIP H1 ENCFF036PEF 225 bp overlap
ChIP K-562 ENCSR000BLK.SRF.K-562 140 bp overlap
ChIP K-562 ENCSR582IAO.SRF.K-562 136 bp overlap
ChIP K562 ENCFF664RPC 201 bp overlap
ChIP K562 ENCFF766EOO 397 bp overlap
STAT5B 1 dataset
ChIP K562 ENCFF323UDL 217 bp overlap
TAF7 2 datasets
ChIP K-562 ENCSR671GFC.TAF7.K-562 188 bp overlap
ChIP K562 ENCFF314WLE 186 bp overlap
TBX18 2 datasets
ChIP K-562 ENCSR385IUC.TBX18.K-562 173 bp overlap
ChIP K562 ENCFF473CJK 244 bp overlap
TCF15 1 dataset
ChIP K562 ENCFF099NVR 149 bp overlap
TCFL5 2 datasets
ChIP K-562 ENCSR844JVU.TCFL5.K-562 145 bp overlap
ChIP K562 ENCFF187XYP 148 bp overlap
TEAD1 2 datasets
ChIP K-562 ENCSR591ASD.TEAD1.K-562 172 bp overlap
ChIP K562 ENCFF465AQA 189 bp overlap
TEAD2 2 datasets
ChIP K-562 ENCSR635GTR.TEAD2.K-562 170 bp overlap
ChIP K562 ENCFF039ZWC 171 bp overlap
TFCP2 1 dataset
ChIP K562 ENCFF984WXL 170 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 188 bp overlap
THRB 1 dataset
ChIP K562 ENCFF620NFN 141 bp overlap
TSHZ1 2 datasets
ChIP K-562 ENCSR958JPH.TSHZ1.K-562 163 bp overlap
ChIP K562 ENCFF289XHG 145 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 237 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 77 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 141 bp overlap
ZBTB12 2 datasets
ChIP K-562 ENCSR172OSX.ZBTB12.K-562 159 bp overlap
ChIP K562 ENCFF933CVM 185 bp overlap
ZBTB17 1 dataset
ChIP K562 ENCFF731UTU 243 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 98 bp overlap
ZBTB34 1 dataset
ChIP K562 ENCFF236ZOA 202 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 301 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 76 bp overlap
ZBTB9 1 dataset
ChIP K562 ENCFF233EFX 208 bp overlap
ZFP1 1 dataset
ChIP K562 ENCFF777OLK 171 bp overlap
ZFPM2 1 dataset
ChIP K562 ENCFF804JGZ 251 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 99 bp overlap
ZKSCAN8 1 dataset
ChIP K562 ENCFF387ETI 444 bp overlap
ZNF133 1 dataset
ChIP K562 ENCFF924CKV 142 bp overlap
ZNF134 1 dataset
ChIP K562 ENCFF502NWS 213 bp overlap
ZNF175 2 datasets
ChIP K-562 ENCSR011PEI.ZNF175.K-562 159 bp overlap
ChIP K562 ENCFF497AEJ 370 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 366 bp overlap
ZNF215 2 datasets
ChIP K-562 ENCSR699RWG.ZNF215.K-562 195 bp overlap
ChIP K562 ENCFF317MOH 219 bp overlap
ZNF239 2 datasets
ChIP K-562 ENCSR606KTL.ZNF239.K-562 168 bp overlap
ChIP K562 ENCFF703IKI 182 bp overlap
ZNF24 1 dataset
ChIP K562 ENCFF497GLV 303 bp overlap
ZNF257 2 datasets
ChIP K-562 ENCSR492FKD.ZNF257.K-562 118 bp overlap
ChIP K562 ENCFF849YZP 138 bp overlap
ZNF274 1 dataset
ChIP HepG2 ENCFF155SWH 57 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 205 bp overlap
ZNF3 1 dataset
ChIP K562 ENCFF410DHO 230 bp overlap
ZNF311 2 datasets
ChIP K-562 ENCSR388ZRV.ZNF311.K-562 195 bp overlap
ChIP K562 ENCFF986QSP 234 bp overlap
ZNF354B 1 dataset
ChIP K562 ENCFF955JQT 249 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 439 bp overlap
ZNF397 2 datasets
ChIP K-562 ENCSR508EEX.ZNF397.K-562 150 bp overlap
ChIP K562 ENCFF203WSD 173 bp overlap
ZNF398 1 dataset
ChIP K562 ENCFF664RQO 144 bp overlap
ZNF41 2 datasets
ChIP K-562 ENCSR235PYI.ZNF41.K-562 154 bp overlap
ChIP K562 ENCFF693FMG 153 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 239 bp overlap
ZNF44 1 dataset
ChIP HepG2 ENCFF984YCN 175 bp overlap
ZNF444 2 datasets
ChIP K-562 ENCSR164RIC.ZNF444.K-562 173 bp overlap
ChIP K562 ENCFF329VCH 181 bp overlap
ZNF445 2 datasets
ChIP K-562 ENCSR883UGG.ZNF445.K-562 156 bp overlap
ChIP K562 ENCFF939SEG 182 bp overlap
ZNF507 3 datasets
ChIP K-562 ENCSR577KQD.ZNF507.K-562 135 bp overlap
ChIP K562 ENCFF235JOG 206 bp overlap
ChIP K562 ENCFF577IRE 297 bp overlap
ZNF583 2 datasets
ChIP K-562 ENCSR775EQV.ZNF583.K-562 176 bp overlap
ChIP K562 ENCFF879KXH 196 bp overlap
ZNF584 1 dataset
ChIP K562 ENCFF771INO 423 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 374 bp overlap
ZNF592 4 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 268 bp overlap
ChIP K562 ENCFF547OSS 310 bp overlap
ChIP MCF-7 ENCFF315RIM 214 bp overlap
ChIP MCF-7 ENCSR701AQS.ZNF592.MCF-7 142 bp overlap
ZNF639 2 datasets
ChIP K-562 ENCSR845BCL.ZNF639.K-562 82 bp overlap
ChIP K562 ENCFF271FQR 422 bp overlap
ZNF644 2 datasets
ChIP K-562 ENCSR729HVR.ZNF644.K-562 128 bp overlap
ChIP K562 ENCFF290PDB 395 bp overlap
ZNF668 1 dataset
ChIP K562 ENCFF112IUE 247 bp overlap
ZNF699 1 dataset
ChIP K562 ENCFF852SLL 227 bp overlap
ZNF700 2 datasets
ChIP K-562 ENCSR959BQO.ZNF700.K-562 124 bp overlap
ChIP K562 ENCFF657OXY 184 bp overlap
ZNF707 1 dataset
ChIP K562 ENCFF243WRW 70 bp overlap
ZNF717 1 dataset
ChIP K562 ENCFF839EKA 220 bp overlap
ZNF740 3 datasets
ChIP K-562 ENCSR532EMP.ZNF740.K-562 237 bp overlap
ChIP K562 ENCFF447IXE 223 bp overlap
ChIP K562 ENCFF447IXE 593 bp overlap
ZNF76 2 datasets
ChIP K-562 ENCSR257AFV.ZNF76.K-562 164 bp overlap
ChIP K562 ENCFF267KQX 257 bp overlap
ZNF766 2 datasets
ChIP K562 ENCFF348LDO 385 bp overlap
ChIP K562 ENCFF348LDO 594 bp overlap
ZNF79 1 dataset
ChIP K-562 ENCSR995FUM.ZNF79.K-562 159 bp overlap
ZNF83 1 dataset
ChIP K562 ENCFF340RTV 338 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 209 bp overlap
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