chr12 : 97,275,261 97,276,556
1,295 bp 166 TFs 1 linked gene
This 1.3 kb open chromatin element is linked to LINC02409 and is bound by 166 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02409 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:97,270,261 – 97,281,556
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
166 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 448 bp overlap
AR 2 datasets
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 137 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 190 bp overlap
ARNT 2 datasets
ChIP 501-mel GSE95280.ARNT.501-mel 330 bp overlap
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 430 bp overlap
ARNTL 1 dataset
ChIP GSC_3565 GSE134972.ARNTL.GSC_3565 229 bp overlap
ASCL1 6 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 122 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 145 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 601 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 203 bp overlap
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BARX1 2 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCL6 6 datasets
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 128 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 592 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 379 bp overlap
ChIP OCI-Ly1_si GSE107920.BCL6.OCI-Ly1_si 137 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 206 bp overlap
BCOR 5 datasets
ChIP WA01 GSE104690.BCOR.WA01 598 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 300 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 284 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 741 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 424 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 159 bp overlap
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 330 bp overlap
BRD4 24 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 590 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 498 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 229 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 364 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 338 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 640 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 477 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 636 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 228 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 368 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 210 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 193 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 223 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 165 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 230 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 211 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 493 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 186 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 147 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 262 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 199 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 735 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 648 bp overlap
BSX 2 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 393 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CHD4 5 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 285 bp overlap
ChIP 501-mel GSE134848.CHD4.501-mel 214 bp overlap
ChIP RH5 GSE155861.CHD4.RH5 428 bp overlap
ChIP RH5 GSE155861.CHD4.RH5 262 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 244 bp overlap
CHD7 3 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 241 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 730 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 456 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 139 bp overlap
CTCF 38 datasets
ChIP H9 ENCFF152GTF 461 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 397 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 127 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 212 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 262 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 92 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 160 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 310 bp overlap
ChIP brain ENCFF099ASU 557 bp overlap
ChIP brain ENCFF685VRG 611 bp overlap
ChIP brain ENCFF685VRG 611 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 185 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 379 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 477 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 425 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 541 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 450 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 108 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF476NBQ 198 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF476NBQ 411 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 330 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 445 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 475 bp overlap
ChIP neural cell ENCFF335ADI 505 bp overlap
ChIP neural progenitor cell ENCFF420RBO 411 bp overlap
ChIP neural progenitor cell ENCFF420RBO 411 bp overlap
ChIP neural progenitor cell ENCFF581WPG 581 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 238 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 383 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 321 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 362 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 228 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 491 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 786 bp overlap
DLX1 2 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 440 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 154 bp overlap
EGR1 2 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 376 bp overlap
ChIP HepG2 ENCFF674RQO 481 bp overlap
EP300 3 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 236 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 311 bp overlap
ChIP tibial nerve ENCFF346AYA 224 bp overlap
EPAS1 1 dataset
ChIP 501-mel GSE95280.EPAS1.501-mel 298 bp overlap
ERG 1 dataset
ChIP MCF-7 GSE23730.ERG.MCF-7 201 bp overlap
ESR1 6 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 234 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 218 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 327 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 364 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 250 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
EZH2 5 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 178 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 468 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 1295 bp overlap
ChIP neural progenitor cell ENCFF018MKA 764 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 184 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
ChIP H9 GSE31006.FOXP1.H9 172 bp overlap
GABPB1 1 dataset
ChIP HepG2 ENCFF315AWN 517 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 274 bp overlap
GBX2 2 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 1122 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 365 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 308 bp overlap
HESX1 2 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 408 bp overlap
HNF1A 1 dataset
ChIP HEE_1 GSE76376.HNF1A.HEE_1 93 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXA7 2 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 203 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD3 2 datasets
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 280 bp overlap
JUN 1 dataset
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 276 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 176 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 87 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 121 bp overlap
LBX2 2 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAX 6 datasets
ChIP H1 ENCFF914VQY 117 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 232 bp overlap
ChIP Hep-G2 ENCSR000EDS.MAX.Hep-G2 182 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 107 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 359 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 344 bp overlap
MAZ 1 dataset
ChIP Hep-G2 ENCSR000EDN.MAZ.Hep-G2 159 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 156 bp overlap
MED1 3 datasets
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 247 bp overlap
ChIP RH4 GSE83726.MED1.RH4 123 bp overlap
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 274 bp overlap
MITF 3 datasets
ChIP 501-mel GSE61965.MITF.501-mel 169 bp overlap
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 236 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 334 bp overlap
MLX 2 datasets
ChIP Hep-G2 ENCSR125DAD.MLX.Hep-G2 236 bp overlap
ChIP HepG2 ENCFF652PXN 92 bp overlap
MLXIP 1 dataset
ChIP HepG2 ENCFF634EYT 357 bp overlap
MSC 2 datasets
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
Motif ES_0h ES_0h-MSC_MA0665.1 10 bp overlap
MSX1 2 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 339 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 259 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 184 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 205 bp overlap
MYOD1 3 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 207 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 234 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 294 bp overlap
MYOG 3 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 341 bp overlap
Msx3 2 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 456 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 207 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 233 bp overlap
NCOR2 1 dataset
ChIP OCI-Ly1 GSE29282.NCOR2.OCI-Ly1 120 bp overlap
NEUROD1 6 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 281 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 125 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 423 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 329 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 323 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 336 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 2 datasets
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 179 bp overlap
NRF1 2 datasets
ChIP Hep-G2 ENCSR853ADA.NRF1.Hep-G2 158 bp overlap
ChIP Hep-G2 GSE97661.NRF1.Hep-G2 133 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Nobox 2 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OLIG2 5 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 223 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 444 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 407 bp overlap
ChIP brain-prefrontal-cortex_2017025 GSE129039.OLIG2.brain-prefrontal-cortex_2017025 371 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 393 bp overlap
ONECUT1 2 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 90 bp overlap
ChIP HepG2 ENCFF243FIR 145 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 110 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 222 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 174 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 233 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 233 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 223 bp overlap
POLR2A 3 datasets
ChIP neural cell ENCFF604SPB 380 bp overlap
ChIP thyroid gland ENCFF979LRR 257 bp overlap
ChIP thyroid gland ENCFF979LRR 191 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 483 bp overlap
POU2F3 2 datasets
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 249 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 177 bp overlap
POU4F2 2 datasets
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 260 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 148 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 265 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 243 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 286 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 438 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 191 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 160 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap
ChIP NCCIT GSE71675.PRDM14.NCCIT 318 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 259 bp overlap
RARA 3 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 354 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 569 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 1283 bp overlap
RAX 2 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 246 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
REST 3 datasets
ChIP neural ENCSR000BTV.REST.neural 736 bp overlap
ChIP neural ENCSR000BTV.REST.neural 226 bp overlap
ChIP neural cell ENCFF882LXX 459 bp overlap
RUNX1 2 datasets
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 291 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 248 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 197 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 171 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF896IJG 301 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 146 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 150 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 235 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 510 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 480 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 143 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 313 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 337 bp overlap
SMARCA4 13 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 652 bp overlap
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 97 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 212 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 1015 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 128 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 186 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 397 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 403 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 482 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 412 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 315 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 282 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 227 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 358 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 356 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 247 bp overlap
SMARCC1 4 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 521 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 468 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 201 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 402 bp overlap
SMC3 3 datasets
ChIP neural ENCSR404BPV.SMC3.neural 651 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 238 bp overlap
ChIP neural cell ENCFF795YGY 471 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 209 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 357 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 214 bp overlap
SOX2 11 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 430 bp overlap
ChIP NPC GSE122631.SOX2.NPC 136 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 375 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 194 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 207 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 297 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 255 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 286 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 242 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 292 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 206 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 1295 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 376 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 352 bp overlap
ChIP HepG2 ENCFF767OCK 555 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 159 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT1::STAT2 2 datasets
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 306 bp overlap
TAF1 4 datasets
ChIP neural ENCSR000BTX.TAF1.neural 164 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 127 bp overlap
ChIP neural cell ENCFF468SPD 577 bp overlap
ChIP neural cell ENCFF468SPD 490 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 212 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 377 bp overlap
TFAP4::FLI1 2 datasets
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif ES_0h ES_0h-TFAP4FLI1_MA1967.2 14 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 396 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 412 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 153 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 357 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 314 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 443 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 568 bp overlap
ZNF746 1 dataset
ChIP HepG2 ENCFF056LOE 474 bp overlap