chr1 : 181,035,921 181,036,673
752 bp 125 TFs 3 linked genes
This 752 bp open chromatin element is linked to MR1, STX6, and IER5 and is bound by 125 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
MR1 2.5 kb Proximal Proximity
STX6 13.4 kb Distal Multiome
IER5 52.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:181,030,921 – 181,041,673
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 244 bp overlap
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 169 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 438 bp overlap
ChIP K562 ENCFF938UXQ 244 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 586 bp overlap
ATF6 1 dataset
ChIP K562 ENCFF032AOW 222 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 351 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 286 bp overlap
BRD4 3 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 219 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 178 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 228 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 295 bp overlap
ChIP K562 ENCFF673OEZ 157 bp overlap
CEBPA 3 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 124 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 269 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 99 bp overlap
CEBPB 2 datasets
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 305 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 210 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 219 bp overlap
CREBBP 1 dataset
ChIP monocyte_IFNg-LPS GSE131294.CREBBP.monocyte_IFNg-LPS 193 bp overlap
CTBP1 3 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 685 bp overlap
ChIP K562 ENCFF403WPG 374 bp overlap
ChIP K562 ENCFF403WPG 448 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF057AIX 345 bp overlap
CXXC5 2 datasets
ChIP K562 ENCFF497CZN 561 bp overlap
ChIP K562 ENCFF497CZN 502 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 222 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 243 bp overlap
ChIP K562 ENCFF739JDE 497 bp overlap
ChIP K562 ENCFF775HUO 274 bp overlap
E4F1 2 datasets
ChIP K562 ENCFF622HMZ 452 bp overlap
ChIP K562 ENCFF622HMZ 601 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 395 bp overlap
ELF1 3 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 198 bp overlap
ChIP K562 ENCFF886KFV 401 bp overlap
ChIP K562 ENCFF886KFV 201 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 291 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 303 bp overlap
ChIP K562 ENCFF226VMS 317 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 185 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 752 bp overlap
ChIP K562 ENCFF968PEP 444 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 666 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 676 bp overlap
ChIP DE DE-FOXA2-2 547 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 208 bp overlap
FOXA3 2 datasets
ChIP K562 ENCFF781VSC 341 bp overlap
ChIP K562 ENCFF781VSC 333 bp overlap
GATA1 5 datasets
ChIP K-562 GSE107726.GATA1.K-562 387 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 197 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 200 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 173 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
GATA2 5 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 230 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 749 bp overlap
ChIP K562 ENCFF830LLA 577 bp overlap
ChIP K562 ENCFF830LLA 533 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 245 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 246 bp overlap
ChIP DE DE-GATA4-1 535 bp overlap
ChIP DE DE-GATA4-2 492 bp overlap
ChIP foregut GSE117136.GATA4.foregut 515 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 476 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 497 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 509 bp overlap
ChIP DE DE-GATA6-2 598 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 490 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 439 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 397 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 559 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 538 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 447 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 471 bp overlap
ChIP foregut GSE117136.GATA6.foregut 530 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 421 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 284 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 475 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 139 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 442 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 115 bp overlap
ChIP K562 ENCFF968WBH 521 bp overlap
ChIP K562 ENCFF968WBH 459 bp overlap
HDAC2 7 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 115 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 503 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 257 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 211 bp overlap
ChIP K-562 GSE140325.HDAC2.K-562 92 bp overlap
ChIP K562 ENCFF744ALD 421 bp overlap
ChIP K562 ENCFF744ALD 421 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 406 bp overlap
HLTF 2 datasets
ChIP K562 ENCFF783OCM 352 bp overlap
ChIP K562 ENCFF783OCM 391 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 238 bp overlap
ChIP K562 ENCFF055GAZ 526 bp overlap
ChIP K562 ENCFF055GAZ 301 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 554 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 568 bp overlap
ChIP K562 ENCFF348IBL 330 bp overlap
ChIP K562 ENCFF771OHZ 497 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 167 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 258 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 187 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 445 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 252 bp overlap
ChIP K562 ENCFF128TYE 461 bp overlap
KLF6 1 dataset
ChIP K-562 ENCSR297CGF.KLF6.K-562 250 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 210 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 172 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 367 bp overlap
ChIP K562 ENCFF320EQC 252 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 328 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 187 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 311 bp overlap
MEF2D 1 dataset
ChIP K562 ENCFF392LDT 421 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 437 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 308 bp overlap
ChIP K562 ENCFF731XJJ 425 bp overlap
MTA1 2 datasets
ChIP K-562 ENCSR807BGP.MTA1.K-562 337 bp overlap
ChIP K562 ENCFF230ZKA 445 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 217 bp overlap
ChIP K562 ENCFF441KCP 417 bp overlap
MTA3 4 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 425 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 357 bp overlap
ChIP K562 ENCFF289UFB 537 bp overlap
ChIP K562 ENCFF289UFB 411 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 294 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 531 bp overlap
NCOA2 3 datasets
ChIP HepG2 ENCFF853BJJ 451 bp overlap
ChIP HepG2 ENCFF853BJJ 382 bp overlap
ChIP MCF-7 ERP000901.NCOA2.MCF-7 138 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 445 bp overlap
NCOR2 1 dataset
ChIP AML_shaml1-eto GSE131939.NCOR2.AML_shaml1-eto 146 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 243 bp overlap
NR2C1 2 datasets
ChIP K-562 ENCSR178DEG.NR2C1.K-562 285 bp overlap
ChIP K562 ENCFF568JLK 411 bp overlap
NR2C2 1 dataset
ChIP K-562 ENCSR750LYM.NR2C2.K-562 464 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 503 bp overlap
ChIP K562 ENCFF221HJH 497 bp overlap
NR2F6 3 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 179 bp overlap
ChIP K562 ENCFF674RQA 457 bp overlap
ChIP K562 ENCFF674RQA 400 bp overlap
NR4A1 1 dataset
ChIP K562 ENCFF998LHF 465 bp overlap
NR5A1 1 dataset
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 131 bp overlap
PATZ1 1 dataset
ChIP K562 ENCFF610CJH 341 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 574 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 223 bp overlap
ChIP K562 ENCFF286KMN 401 bp overlap
PHB 1 dataset
ChIP K562 ENCFF225VHG 337 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 443 bp overlap
ChIP K562 ENCFF236IUS 282 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF640VPA 416 bp overlap
RAD51 1 dataset
ChIP K562 ENCFF133ELP 405 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
RELA 4 datasets
ChIP K-562 ENCSR772EEN.RELA.K-562 450 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 164 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 245 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 162 bp overlap
REST 1 dataset
ChIP K562 ENCFF685YZN 381 bp overlap
RFX5 2 datasets
ChIP HeLa-S3 ENCFF703XPB 325 bp overlap
ChIP Hep-G2 ENCSR000EEA.RFX5.Hep-G2 125 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 611 bp overlap
RREB1 1 dataset
ChIP K-562 ENCSR250WFW.RREB1.K-562 418 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 419 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 541 bp overlap
ChIP K562 ENCFF628RBP 503 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 545 bp overlap
ChIP K562 ENCFF506JCB 517 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 351 bp overlap
ChIP K562 ENCFF690CFF 517 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 150 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 381 bp overlap
ChIP K562 ENCFF059YCJ 437 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 153 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 170 bp overlap
STAT1 3 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 188 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 343 bp overlap
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 178 bp overlap
STAT3 3 datasets
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 398 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 352 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 287 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 241 bp overlap
TAL1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 190 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 199 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 161 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 536 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF465AQA 297 bp overlap
THRA 1 dataset
ChIP HepG2 ENCFF025KMX 385 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 216 bp overlap
USF1 3 datasets
ChIP HepG2 ENCFF201JKA 337 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 143 bp overlap
ChIP K562 ENCFF633EZB 265 bp overlap
USF2 3 datasets
ChIP Hep-G2 GSE97661.USF2.Hep-G2 141 bp overlap
ChIP K562 ENCFF306QPU 537 bp overlap
ChIP K562 ENCFF397QGU 265 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 147 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 158 bp overlap
ZBTB9 2 datasets
ChIP K562 ENCFF233EFX 397 bp overlap
ChIP K562 ENCFF233EFX 391 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 313 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 325 bp overlap
ChIP K562 ENCFF795CMH 477 bp overlap
ChIP K562 ENCFF975RXS 461 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 184 bp overlap
ZKSCAN5 1 dataset
ChIP HepG2 ENCFF579HCQ 258 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 257 bp overlap
ChIP K562 ENCFF361LXT 193 bp overlap
ZNF146 2 datasets
ChIP K562 ENCFF274MAU 158 bp overlap
ChIP K562 ENCFF477SLH 177 bp overlap
ZNF239 3 datasets
ChIP K-562 ENCSR606KTL.ZNF239.K-562 322 bp overlap
ChIP K562 ENCFF703IKI 331 bp overlap
ChIP K562 ENCFF703IKI 331 bp overlap
ZNF263 4 datasets
ChIP HEK293 ENCFF336CWQ 360 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 102 bp overlap
ChIP HepG2 ENCFF626SSV 240 bp overlap
ChIP K562 ENCFF640RNA 521 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 471 bp overlap
ZNF319 1 dataset
ChIP K562 ENCFF561ZSB 361 bp overlap
ZNF584 3 datasets
ChIP K562 ENCFF771INO 622 bp overlap
ChIP K562 ENCFF771INO 663 bp overlap
ChIP K562 ENCFF771INO 448 bp overlap
ZNF639 2 datasets
ChIP K-562 ENCSR845BCL.ZNF639.K-562 194 bp overlap
ChIP K562 ENCFF271FQR 719 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 293 bp overlap
ZNF76 2 datasets
ChIP K-562 ENCSR257AFV.ZNF76.K-562 261 bp overlap
ChIP K562 ENCFF267KQX 361 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 605 bp overlap