chr9 : 26,893,164 26,893,697
533 bp 124 TFs 1 linked gene
This 533 bp open chromatin element is linked to CAAP1 and is bound by 124 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CAAP1 361 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:26,888,164 – 26,898,697
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
None 1 dataset
ChIP HepG2 ENCFF731CFD 82 bp overlap
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 129 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 66 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 117 bp overlap
ATF1 2 datasets
ChIP HepG2 ENCFF239LTQ 118 bp overlap
ChIP K-562 ENCSR091GVJ.ATF1.K-562 128 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 115 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 180 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 109 bp overlap
BAZ2A 1 dataset
ChIP HepG2 ENCFF797RVO 53 bp overlap
BRD2 11 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 86 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 72 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 193 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 71 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 260 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 260 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 68 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 68 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 165 bp overlap
ChIP NCI-H23 GSE113714.BRD2.NCI-H23 52 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 73 bp overlap
BRD3 3 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 164 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 283 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 224 bp overlap
BRD4 30 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 241 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 270 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 78 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 301 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 106 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 102 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 278 bp overlap
ChIP Hep-G2 ENCSR514EOE.BRD4.Hep-G2 95 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 269 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 143 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 120 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 288 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 97 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 67 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 178 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 497 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 90 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 94 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 67 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 52 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 276 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 198 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 270 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 52 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 171 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 381 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 239 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 168 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 106 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 346 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE50622.CDK7.Jurkat 99 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT967 GSE128230.CDK8.leiomyoma_PT967 57 bp overlap
CREBL2 1 dataset
ChIP HepG2 ENCFF512MWV 53 bp overlap
CREM 1 dataset
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 62 bp overlap
CTCF 2 datasets
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 163 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 64 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 100 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 289 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 208 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 65 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 81 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 130 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 51 bp overlap
ETS1 2 datasets
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 184 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 124 bp overlap
FOSB 1 dataset
ChIP A549 ENCFF029EEU 235 bp overlap
FOXA1 8 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 124 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 67 bp overlap
ChIP LNCaP GSE56288.FOXA1.LNCaP 96 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 129 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 87 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 53 bp overlap
ChIP prostate_2030 GSE130408.FOXA1.prostate_2030 159 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 51 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR290MUH.GABPA.K-562 301 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 218 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 94 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 224 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 152 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 291 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 99 bp overlap
HOXA7 2 datasets
ChIP A549 ENCFF746ZBJ 207 bp overlap
ChIP A549 ENCFF746ZBJ 331 bp overlap
HOXB13 6 datasets
ChIP G-401 GSE65381.HOXB13.G-401 312 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 71 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 75 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 63 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 77 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 76 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 100 bp overlap
JUND 1 dataset
ChIP HCT116 ENCFF748ZQX 63 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 333 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 119 bp overlap
KMT2A 7 datasets
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 119 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 121 bp overlap
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 164 bp overlap
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 226 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 58 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 103 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 111 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 108 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 65 bp overlap
MED1 5 datasets
ChIP G296S GSE85628.MED1.G296S 80 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 80 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 346 bp overlap
ChIP MOLM-13 GSE154985.MED1.MOLM-13 163 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 138 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 170 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 264 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 50 bp overlap
MTA3 3 datasets
ChIP GM12878 ENCFF681QPL 96 bp overlap
ChIP GM12878 ENCFF681QPL 321 bp overlap
ChIP GM12878 ENCFF681QPL 533 bp overlap
MTF2 1 dataset
ChIP HepG2 ENCFF916FZN 129 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 172 bp overlap
MYBL2 3 datasets
ChIP A-673 GSE119971.MYBL2.A-673 284 bp overlap
ChIP HepG2 ENCFF176QIX 86 bp overlap
ChIP HepG2 ENCFF176QIX 286 bp overlap
MYC 1 dataset
ChIP MIA-PaCa-2_CM GSE143804.MYC.MIA-PaCa-2_CM 83 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 65 bp overlap
NANOG 4 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 480 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 513 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 235 bp overlap
ChIP hESC GSE18292.NANOG.hESC 101 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 215 bp overlap
NCOA1 1 dataset
ChIP HepG2 ENCFF624JES 161 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 362 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCFF259FWL 109 bp overlap
NFRKB 2 datasets
ChIP K-562 ENCSR657EOF.NFRKB.K-562 77 bp overlap
ChIP K562 ENCFF057YFW 183 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 80 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 52 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 94 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 195 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 125 bp overlap
PAX8 2 datasets
ChIP GM12878 ENCFF033MGF 251 bp overlap
ChIP GM12878 ENCSR192AFN.PAX8.GM12878 50 bp overlap
PHF8 3 datasets
ChIP A549 ENCFF815XUD 374 bp overlap
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 247 bp overlap
ChIP HepG2 ENCFF892HVG 54 bp overlap
POLR2A 3 datasets
ChIP Panc1 ENCFF290KAB 79 bp overlap
ChIP breast epithelium ENCFF955FMX 51 bp overlap
ChIP erythroblast ENCFF498VMR 65 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 122 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 436 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 533 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 330 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCFF916JXQ 66 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 174 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 78 bp overlap
ChIP HepG2 ENCFF939HTZ 82 bp overlap
ChIP K562 ENCFF196WTG 192 bp overlap
ChIP K562 ENCFF967GRF 191 bp overlap
RUVBL2 1 dataset
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 238 bp overlap
SETDB1 1 dataset
ChIP HEK293 ENCFF676PLV 274 bp overlap
SFPQ 2 datasets
ChIP HepG2 ENCFF145CDF 129 bp overlap
ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 236 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 144 bp overlap
SMAD3 2 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 54 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 86 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 101 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 255 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 123 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 264 bp overlap
SNAPC2 1 dataset
ChIP HepG2 ENCFF237IWR 62 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 252 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 90 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 60 bp overlap
STAT6 1 dataset
ChIP HepG2 ENCFF370LZV 109 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 98 bp overlap
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 377 bp overlap
ChIP HeLa_Flavo-10min-H2O2 GSE100742.SUPT5H.HeLa_Flavo-10min-H2O2 81 bp overlap
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 221 bp overlap
TAF1 2 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 63 bp overlap
ChIP liver ENCFF972HXJ 198 bp overlap
TBP 5 datasets
ChIP HeLa-S3 ENCFF715NNJ 89 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 92 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 271 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 407 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 50 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 140 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 213 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 337 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 86 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 125 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 186 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 147 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 263 bp overlap
ZFAT 1 dataset
ChIP HepG2 ENCFF236QRV 52 bp overlap
ZFP36L1 1 dataset
ChIP HepG2 ENCFF375BAZ 108 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 217 bp overlap
ZNF20 2 datasets
ChIP HepG2 ENCFF518BKZ 503 bp overlap
ChIP HepG2 ENCFF518BKZ 501 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 86 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 204 bp overlap
ZNF320 2 datasets
ChIP HEK293 GSE76494.ZNF320.HEK293 219 bp overlap
ChIP HEK293T GSE78099.ZNF320.HEK293T 114 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 474 bp overlap
ZNF337 1 dataset
ChIP HepG2 ENCFF530ZHE 134 bp overlap
ZNF34 1 dataset
ChIP HepG2 ENCFF739BBD 176 bp overlap
ZNF343 1 dataset
ChIP HepG2 ENCFF003KCM 105 bp overlap
ZNF414 1 dataset
ChIP HepG2 ENCFF809EHH 144 bp overlap
ZNF430 1 dataset
ChIP HepG2 ENCFF967HQR 95 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 134 bp overlap
ZNF605 1 dataset
ChIP HepG2 ENCFF640NFJ 77 bp overlap
ZNF623 1 dataset
ChIP HEK293 ENCFF505YHP 213 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 241 bp overlap
ZNF778 1 dataset
ChIP HepG2 ENCFF967DPC 50 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 320 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 198 bp overlap