chr3 : 109,337,006 – 109,338,173
1,167 bp 155 TFs 3 linked genes
This 1.2 kb open chromatin element is linked to DPPA4, ENSG00000289358, and DPPA2 and is bound by 155 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DPPA4 at TSS At TSS Proximity
ENSG00000289358 at TSS At TSS Proximity
DPPA2 21.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:109,332,006 – 109,343,173
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
155 transcription factors
Source
Cell type
AFF4 2 datasets
ChIP WTC11 ENCFF556XTF 445 bp overlap
ChIP WTC11 ENCFF556XTF 445 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 292 bp overlap
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 152 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 259 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 545 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 760 bp overlap
ATF2 2 datasets
ChIP WA01 ENCSR000BQU.ATF2.WA01 644 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 161 bp overlap
Arid3a 2 datasets
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 135 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 191 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 684 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 579 bp overlap
BRD3 2 datasets
ChIP H-1 GSE126661.BRD3.H-1 296 bp overlap
ChIP H-1_DE GSE126661.BRD3.H-1_DE 798 bp overlap
BRD4 3 datasets
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 262 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 360 bp overlap
ChIP hESC GSE33281.BRD4.hESC 162 bp overlap
CHD1 4 datasets
ChIP H1 ENCFF128BID 391 bp overlap
ChIP H1 ENCFF998XEK 114 bp overlap
ChIP H1 ENCFF998XEK 616 bp overlap
ChIP WA01 ENCSR000EBU.CHD1.WA01 581 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 142 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 278 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 518 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 263 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 157 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 210 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 200 bp overlap
Dux 2 datasets
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 224 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 261 bp overlap
EHF 5 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 7 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 5 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
ELK4 5 datasets
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
Motif DE_24h DE_24h-ELK4_MA0076.3 9 bp overlap
Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
Motif ES_0h ES_0h-ELK4_MA0076.3 9 bp overlap
EOMES 3 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif ES_0h ES_0h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 201 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 152 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 377 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 297 bp overlap
ETV1 7 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif DE_24h DE_24h-ETV1_MA0761.3 9 bp overlap
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 5 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_24h DE_24h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV2::HOXB13 2 datasets
Motif DE_12h DE_12h-ETV2HOXB13_MA1943.2 13 bp overlap
Motif ES_0h ES_0h-ETV2HOXB13_MA1943.2 13 bp overlap
ETV6 5 datasets
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
Motif DE_24h DE_24h-ETV6_MA0645.2 9 bp overlap
Motif DE_36h DE_36h-ETV6_MA0645.2 9 bp overlap
Motif DE_48h DE_48h-ETV6_MA0645.2 9 bp overlap
Motif ES_0h ES_0h-ETV6_MA0645.2 9 bp overlap
ETV7 5 datasets
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Motif DE_24h DE_24h-ETV7_MA1708.2 9 bp overlap
Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap
Motif DE_48h DE_48h-ETV7_MA1708.2 9 bp overlap
Motif ES_0h ES_0h-ETV7_MA1708.2 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 5 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
Erg 7 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXK1 2 datasets
ChIP WTC11 ENCFF875IGU 391 bp overlap
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXO1::ELK1 5 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 220 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GABPA 7 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GTF2F1 1 dataset
ChIP WA01 ENCSR000EBP.GTF2F1.WA01 170 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 143 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 146 bp overlap
HDAC2 5 datasets
ChIP H1 ENCFF353UJQ 645 bp overlap
ChIP H1 ENCFF353UJQ 380 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 154 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 184 bp overlap
Hmx2 2 datasets
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap
IKZF2 5 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
INSM1 6 datasets
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Motif DE_24h DE_24h-INSM1_MA0155.1 12 bp overlap
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
Motif DE_48h DE_48h-INSM1_MA0155.1 12 bp overlap
Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap
Motif ES_0h ES_0h-INSM1_MA0155.1 12 bp overlap
Ikzf3 7 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_24h DE_24h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 479 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 365 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 619 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 480 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 524 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 479 bp overlap
ChIP WTC11 ENCFF172UDA 361 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 171 bp overlap
KDM1A 4 datasets
ChIP H1 ENCFF696SGD 227 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 121 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 258 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 213 bp overlap
KLF4 1 dataset
ChIP WA09 GSE105028.KLF4.WA09 326 bp overlap
Lhx3 2 datasets
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 181 bp overlap
ChIP WTC11 ENCFF223QFY 585 bp overlap
MYC 2 datasets
ChIP H1 ENCFF794ZJT 265 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 256 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 193 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 721 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 514 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 661 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 726 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 600 bp overlap
ChIP hESC GSE18292.NANOG.hESC 94 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 193 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
NIPBL 6 datasets
ChIP WA09 GSE105028.NIPBL.WA09 958 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 489 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 249 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 238 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 530 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 266 bp overlap
NR2C1 1 dataset
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 7 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap
Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
Motif DE_60h DE_60h-NR2C2_MA0504.2 14 bp overlap
Motif ES_0h ES_0h-NR2C2_MA0504.2 14 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Nr1H2 1 dataset
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 1 dataset
Motif DE_36h DE_36h-Nr2F6_MA0728.1 15 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 383 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 581 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 226 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 348 bp overlap
ChIP H1 ENCFF566JSR 418 bp overlap
ChIP H1 ENCFF770YBQ 119 bp overlap
ChIP H1 ENCFF833NJP 239 bp overlap
POU2F3 5 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap
Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU4F1 3 datasets
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
Motif ES_0h ES_0h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 3 datasets
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap
POU5F1 12 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 359 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 885 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 359 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 741 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 446 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 373 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 313 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 680 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 908 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 240 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 460 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 289 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Plagl1 6 datasets
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap
Motif DE_48h DE_48h-Plagl1_MA1615.2 8 bp overlap
Motif DE_60h DE_60h-Plagl1_MA1615.2 8 bp overlap
Motif ES_0h ES_0h-Plagl1_MA1615.2 8 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Pparg::Rxra 7 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_24h DE_24h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 311 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 296 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 513 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 248 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 114 bp overlap
ChIP H1 ENCFF905HFL 386 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 230 bp overlap
REST 1 dataset
ChIP WA01 ENCSR000BHM.REST.WA01 120 bp overlap
RORA 1 dataset
Motif DE_36h DE_36h-RORA_MA0071.1 10 bp overlap
RORB 1 dataset
Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap
RUNX1 2 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 150 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 150 bp overlap
Rarb 1 dataset
Motif DE_36h DE_36h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 87 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 518 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 521 bp overlap
ChIP H1 ENCFF896IJG 301 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 616 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 246 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD2 3 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 346 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 374 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 270 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 482 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 757 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 705 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 677 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 537 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 252 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 365 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 298 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 280 bp overlap
SMARCA4 9 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 326 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 518 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 337 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 243 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 185 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 371 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 296 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 858 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 485 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 627 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 300 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 802 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 346 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 258 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 367 bp overlap
SP1 5 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 312 bp overlap
ChIP WTC11 ENCFF688PEU 501 bp overlap
SP2 2 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP4 6 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 561 bp overlap
SP5 7 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPDEF 2 datasets
Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap
Motif ES_0h ES_0h-SPDEF_MA0686.2 10 bp overlap
SPIB 8 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Spi1 3 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 356 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 603 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 248 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 337 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 359 bp overlap
TBP 10 datasets
ChIP H1 ENCFF859IIO 207 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 584 bp overlap
ChIP hESC GSE122298.TBP.hESC 789 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 726 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 814 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 577 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 460 bp overlap
ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 257 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 401 bp overlap
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 445 bp overlap
TBR1 2 datasets
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap
TBX1 2 datasets
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
Motif ES_0h ES_0h-TBX1_MA0805.1 8 bp overlap
TBX18 2 datasets
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif ES_0h ES_0h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 119 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 388 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
TP53 3 datasets
ChIP H9 GSE142050.TP53.H9 432 bp overlap
ChIP H9 GSE39912.TP53.H9 216 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 360 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 185 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif ES_0h ES_0h-Tbx6_MA1567.3 9 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
YY1 8 datasets
ChIP H1 ENCFF524BTL 136 bp overlap
ChIP H1 ENCFF524BTL 249 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 149 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 329 bp overlap
ChIP NT2/D1 ENCFF999MII 213 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 348 bp overlap
ChIP WA01 GSE39096.YY1.WA01 239 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 367 bp overlap
Yy1 7 datasets
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
Motif DE_24h DE_24h-Yy1_MA0095.4 8 bp overlap
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
Motif DE_48h DE_48h-Yy1_MA0095.4 8 bp overlap
Motif DE_60h DE_60h-Yy1_MA0095.4 8 bp overlap
Motif DE_72h DE_72h-Yy1_MA0095.4 8 bp overlap
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZBTB11 5 datasets
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_24h DE_24h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_48h DE_48h-ZBTB11_MA2329.1 9 bp overlap
Motif ES_0h ES_0h-ZBTB11_MA2329.1 9 bp overlap
ZBTB32 1 dataset
Motif DE_36h DE_36h-ZBTB32_MA1580.1 10 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 222 bp overlap
ZBTB7A 5 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_24h DE_24h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_48h DE_48h-ZBTB7A_MA0750.3 9 bp overlap
Motif ES_0h ES_0h-ZBTB7A_MA0750.3 9 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZFP42 6 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif DE_24h DE_24h-ZFP42_MA1651.2 13 bp overlap
Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap
Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap
Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZKSCAN5 3 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF143 2 datasets
ChIP WA09 GSE105028.ZNF143.WA09 248 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 293 bp overlap
ZNF148 8 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF157 8 datasets
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
Motif DE_24h DE_24h-ZNF157_MA2331.1 21 bp overlap
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
Motif DE_48h DE_48h-ZNF157_MA2331.1 21 bp overlap
Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap
Motif DE_72h DE_72h-ZNF157_MA2331.1 21 bp overlap
Motif ES_0h ES_0h-ZNF157_MA2331.1 21 bp overlap
ZNF175 5 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF189 2 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 341 bp overlap
ZNF257 3 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF263 5 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
Motif DE_36h DE_36h-ZNF263_MA0528.3 7 bp overlap
Motif DE_48h DE_48h-ZNF263_MA0528.3 7 bp overlap
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF281 9 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF418 1 dataset
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 136 bp overlap
ZNF677 2 datasets
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF740 2 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif ES_0h ES_0h-ZNF740_MA0753.3 10 bp overlap
Huangfu Lab · Publications · Resources · Contact