chr3 : 29,643,123 – 29,643,720
597 bp 177 TFs 1 linked gene
This 597 bp open chromatin element is linked to RBMS3-AS2 and is bound by 177 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RBMS3-AS2 314 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:29,638,123 – 29,648,720
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
177 transcription factors
Source
Cell type
ALX3 3 datasets
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
Motif DE_48h DE_48h-ALX3_MA0634.2 6 bp overlap
Motif DE_60h DE_60h-ALX3_MA0634.2 6 bp overlap
AR 1 dataset
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 112 bp overlap
ARGFX 3 datasets
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
Motif DE_48h DE_48h-ARGFX_MA1463.2 8 bp overlap
Motif DE_60h DE_60h-ARGFX_MA1463.2 8 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 194 bp overlap
ATRX 3 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 481 bp overlap
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 288 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 338 bp overlap
Arid3a 3 datasets
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
BACH2 1 dataset
ChIP SK-N-SH ENCFF518OYX 301 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 173 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 284 bp overlap
BRD2 2 datasets
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 335 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 227 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 154 bp overlap
BRD4 17 datasets
ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 597 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 227 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 597 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 452 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 250 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 208 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 136 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 248 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 340 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 375 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 238 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 179 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 116 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 350 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 77 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 272 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 200 bp overlap
CHD2 3 datasets
ChIP SK-N-SH ENCFF669KMB 121 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 387 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 142 bp overlap
CREB5 3 datasets
ChIP SK-N-SH ENCFF144PMI 199 bp overlap
ChIP SK-N-SH ENCFF144PMI 345 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 306 bp overlap
CRY1 1 dataset
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 255 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 282 bp overlap
ChIP SK-N-SH ENCFF868MXA 351 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 278 bp overlap
CTCF 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 127 bp overlap
DRGX 3 datasets
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
Motif DE_48h DE_48h-DRGX_MA1481.2 6 bp overlap
Motif DE_60h DE_60h-DRGX_MA1481.2 6 bp overlap
DUX4 6 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
DUXA 3 datasets
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Dux 3 datasets
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 295 bp overlap
EHF 1 dataset
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
ChIP SK-N-SH ENCFF871YHY 213 bp overlap
ELF3 1 dataset
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
ELK4 1 dataset
Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap
EMX1 3 datasets
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
Motif DE_48h DE_48h-EMX1_MA0612.3 6 bp overlap
Motif DE_60h DE_60h-EMX1_MA0612.3 6 bp overlap
EMX2 3 datasets
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
Motif DE_48h DE_48h-EMX2_MA0886.2 6 bp overlap
Motif DE_60h DE_60h-EMX2_MA0886.2 6 bp overlap
EN1 3 datasets
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
Motif DE_48h DE_48h-EN1_MA0027.3 6 bp overlap
Motif DE_60h DE_60h-EN1_MA0027.3 6 bp overlap
EN2 3 datasets
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF451CNG 98 bp overlap
ChIP SK-N-SH ENCFF829RWA 308 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 391 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 320 bp overlap
ERF 1 dataset
Motif DE_36h DE_36h-ERF_MA0760.2 9 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 95 bp overlap
ESRRG 2 datasets
ChIP SK-N-SH ENCFF394HLU 246 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 239 bp overlap
ESX1 3 datasets
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
Motif DE_48h DE_48h-ESX1_MA0644.3 7 bp overlap
Motif DE_60h DE_60h-ESX1_MA0644.3 7 bp overlap
ETS1 1 dataset
Motif DE_36h DE_36h-ETS1_MA0098.4 9 bp overlap
ETV1 1 dataset
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_36h DE_36h-ETV2_MA0762.2 9 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap
EVX1 3 datasets
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
Motif DE_48h DE_48h-EVX1_MA0887.2 6 bp overlap
Motif DE_60h DE_60h-EVX1_MA0887.2 6 bp overlap
EVX2 3 datasets
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
Motif DE_48h DE_48h-EVX2_MA0888.2 6 bp overlap
Motif DE_60h DE_60h-EVX2_MA0888.2 6 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 426 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 326 bp overlap
Erg 1 dataset
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 234 bp overlap
FLI1 7 datasets
ChIP A-673 GSE99959.FLI1.A-673 350 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 344 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 359 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 206 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 326 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 344 bp overlap
Motif DE_36h DE_36h-FLI1_MA0475.3 9 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 121 bp overlap
FOXA1 1 dataset
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 210 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 309 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 272 bp overlap
FOXM1 2 datasets
ChIP SK-N-SH ENCFF404RGX 286 bp overlap
ChIP SK-N-SH ENCSR000BTB.FOXM1.SK-N-SH 241 bp overlap
GABPA 1 dataset
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
GATA1::TAL1 3 datasets
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 7 datasets
ChIP SH-SY5Y ENCFF485YIB 270 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 434 bp overlap
ChIP SK-N-SH ENCFF764OZD 185 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 271 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 245 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 209 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 304 bp overlap
GATA3 11 datasets
ChIP BE2C GSE65664.GATA3.BE2C 238 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 239 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 271 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 344 bp overlap
ChIP NGP GSE65664.GATA3.NGP 161 bp overlap
ChIP SH-SY5Y ENCFF475HYF 159 bp overlap
ChIP SH-SY5Y ENCFF475HYF 481 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 302 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 258 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 245 bp overlap
ChIP SK-N-SH ENCFF040SSB 256 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 317 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 200 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 156 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 203 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 344 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 194 bp overlap
GBX1 3 datasets
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap
GLIS3 2 datasets
ChIP SK-N-SH ENCFF370MHZ 285 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 255 bp overlap
GSX1 3 datasets
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
Motif DE_48h DE_48h-GSX1_MA0892.2 6 bp overlap
Motif DE_60h DE_60h-GSX1_MA0892.2 6 bp overlap
GSX2 3 datasets
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
Motif DE_48h DE_48h-GSX2_MA0893.3 7 bp overlap
Motif DE_60h DE_60h-GSX2_MA0893.3 7 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 378 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 327 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 391 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 261 bp overlap
HOXA1 3 datasets
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
Motif DE_48h DE_48h-HOXA1_MA1495.2 6 bp overlap
Motif DE_60h DE_60h-HOXA1_MA1495.2 6 bp overlap
HOXA2 3 datasets
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
Motif DE_48h DE_48h-HOXA2_MA0900.3 6 bp overlap
Motif DE_60h DE_60h-HOXA2_MA0900.3 6 bp overlap
HOXA3 3 datasets
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
Motif DE_48h DE_48h-HOXA3_MA2119.1 7 bp overlap
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
HOXB1 3 datasets
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
Motif DE_48h DE_48h-HOXB1_MA2093.1 7 bp overlap
Motif DE_60h DE_60h-HOXB1_MA2093.1 7 bp overlap
HOXB2 3 datasets
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
Motif DE_48h DE_48h-HOXB2_MA0902.3 6 bp overlap
Motif DE_60h DE_60h-HOXB2_MA0902.3 6 bp overlap
HOXB3 3 datasets
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
Motif DE_48h DE_48h-HOXB3_MA0903.2 6 bp overlap
Motif DE_60h DE_60h-HOXB3_MA0903.2 6 bp overlap
HOXB5 3 datasets
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
Motif DE_48h DE_48h-HOXB5_MA0904.3 6 bp overlap
Motif DE_60h DE_60h-HOXB5_MA0904.3 6 bp overlap
HOXC8 3 datasets
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
Motif DE_48h DE_48h-HOXC8_MA1505.2 6 bp overlap
Motif DE_60h DE_60h-HOXC8_MA1505.2 6 bp overlap
HOXD3 3 datasets
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
Motif DE_48h DE_48h-HOXD3_MA0912.2 8 bp overlap
Motif DE_60h DE_60h-HOXD3_MA0912.2 8 bp overlap
HSF1 1 dataset
ChIP MO91 GSE45852.HSF1.MO91 260 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 422 bp overlap
ChIP SK-N-SH ENCFF285GEQ 374 bp overlap
ISX 3 datasets
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
Motif DE_48h DE_48h-ISX_MA0654.2 6 bp overlap
Motif DE_60h DE_60h-ISX_MA0654.2 6 bp overlap
Ikzf3 1 dataset
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 174 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 233 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 257 bp overlap
LBX1 3 datasets
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap
LHX5 3 datasets
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
Motif DE_48h DE_48h-LHX5_MA1519.2 7 bp overlap
Motif DE_60h DE_60h-LHX5_MA1519.2 7 bp overlap
LHX6 3 datasets
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
LHX9 3 datasets
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap
LMX1A 3 datasets
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
Motif DE_48h DE_48h-LMX1A_MA0702.3 7 bp overlap
Motif DE_60h DE_60h-LMX1A_MA0702.3 7 bp overlap
LMX1B 3 datasets
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Motif DE_48h DE_48h-LMX1B_MA0703.3 8 bp overlap
Motif DE_60h DE_60h-LMX1B_MA0703.3 8 bp overlap
Lhx1 3 datasets
Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap
Motif DE_48h DE_48h-Lhx1_MA1518.3 10 bp overlap
Motif DE_60h DE_60h-Lhx1_MA1518.3 10 bp overlap
Lhx4 3 datasets
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Motif DE_48h DE_48h-Lhx4_MA0704.2 6 bp overlap
Motif DE_60h DE_60h-Lhx4_MA0704.2 6 bp overlap
Lhx8 3 datasets
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
Motif DE_48h DE_48h-Lhx8_MA0705.2 6 bp overlap
Motif DE_60h DE_60h-Lhx8_MA0705.2 6 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 400 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 390 bp overlap
MAX 3 datasets
ChIP SK-N-SH ENCFF285LXR 108 bp overlap
ChIP SK-N-SH ENCFF285LXR 322 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 284 bp overlap
MED1 2 datasets
ChIP SUM159PT_300nMJQ1_24h GSE87418.MED1.SUM159PT_300nMJQ1_24h 161 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 100 bp overlap
MEF2A 1 dataset
ChIP SK-N-SH ENCSR000BVC.MEF2A.SK-N-SH 143 bp overlap
MEIS1 4 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap
MEOX1 3 datasets
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
Motif DE_48h DE_48h-MEOX1_MA0661.2 7 bp overlap
Motif DE_60h DE_60h-MEOX1_MA0661.2 7 bp overlap
MEOX2 3 datasets
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
Motif DE_48h DE_48h-MEOX2_MA0706.2 7 bp overlap
Motif DE_60h DE_60h-MEOX2_MA0706.2 7 bp overlap
MIXL1 3 datasets
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
Motif DE_48h DE_48h-MIXL1_MA0662.2 6 bp overlap
Motif DE_60h DE_60h-MIXL1_MA0662.2 6 bp overlap
MNX1 3 datasets
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
Motif DE_48h DE_48h-MNX1_MA0707.3 6 bp overlap
Motif DE_60h DE_60h-MNX1_MA0707.3 6 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 522 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 246 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 163 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 392 bp overlap
MYC 2 datasets
ChIP NB69 GSE138295.MYC.NB69 301 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 316 bp overlap
MYCN 12 datasets
ChIP BE2C GSE80151.MYCN.BE2C 341 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 326 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 597 bp overlap
ChIP IMR-5_DMSO GSE78957.MYCN.IMR-5_DMSO 93 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 404 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 340 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 597 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 547 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 266 bp overlap
ChIP NGP GSE80151.MYCN.NGP 360 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 315 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 341 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 205 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 241 bp overlap
NKX6-2 3 datasets
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
Motif DE_48h DE_48h-NKX6-2_MA0675.2 6 bp overlap
Motif DE_60h DE_60h-NKX6-2_MA0675.2 6 bp overlap
NOTO 3 datasets
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
Motif DE_48h DE_48h-NOTO_MA0710.2 7 bp overlap
Motif DE_60h DE_60h-NOTO_MA0710.2 7 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 220 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 189 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 189 bp overlap
PDX1 3 datasets
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
Motif DE_48h DE_48h-PDX1_MA0132.3 6 bp overlap
Motif DE_60h DE_60h-PDX1_MA0132.3 6 bp overlap
PHOX2A 4 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 6 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 424 bp overlap
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 407 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 597 bp overlap
POLR2A 3 datasets
ChIP PFSK-1 ENCFF576NIT 454 bp overlap
ChIP SK-N-SH ENCFF683PFH 239 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 95 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 50 bp overlap
POU6F1 4 datasets
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
Motif DE_48h DE_48h-POU6F1_MA0628.2 6 bp overlap
Motif DE_60h DE_60h-POU6F1_MA0628.2 6 bp overlap
ChIP SK-N-SH ENCFF834EMP 291 bp overlap
POU6F2 3 datasets
Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap
Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap
Motif DE_60h DE_60h-POU6F2_MA0793.2 9 bp overlap
PPARA 1 dataset
ChIP SK-N-SH ENCFF446HWC 261 bp overlap
PROP1 7 datasets
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
PRRX1 3 datasets
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
Motif DE_48h DE_48h-PRRX1_MA0716.2 6 bp overlap
Motif DE_60h DE_60h-PRRX1_MA0716.2 6 bp overlap
PRRX2 3 datasets
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 491 bp overlap
RAD21 4 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 231 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 417 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 317 bp overlap
RARA 1 dataset
ChIP SK-N-SH GSE69119.RARA.SK-N-SH 301 bp overlap
RARB 1 dataset
ChIP SK-N-SH ENCFF475WOR 279 bp overlap
RAX2 3 datasets
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
Motif DE_48h DE_48h-RAX2_MA0717.2 6 bp overlap
Motif DE_60h DE_60h-RAX2_MA0717.2 6 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 173 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 467 bp overlap
RELA 1 dataset
ChIP IMR-90 GSE43070.RELA.IMR-90 122 bp overlap
REST 6 datasets
ChIP PFSK-1 ENCFF845VHA 284 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 210 bp overlap
ChIP SK-N-SH ENCFF635KBN 234 bp overlap
ChIP SK-N-SH ENCFF861MKH 245 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 169 bp overlap
ChIP neural ENCSR000BTV.REST.neural 143 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCFF893DLM 154 bp overlap
Runx1 3 datasets
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SHOX 3 datasets
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
Motif DE_48h DE_48h-SHOX_MA0630.2 6 bp overlap
Motif DE_60h DE_60h-SHOX_MA0630.2 6 bp overlap
SIN3A 4 datasets
ChIP PFSK-1 ENCFF218MAY 262 bp overlap
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 158 bp overlap
ChIP SK-N-SH ENCFF931NFD 86 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 297 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 248 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 277 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 473 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 597 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 244 bp overlap
SMC3 1 dataset
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 115 bp overlap
SNAI2 3 datasets
ChIP SK-N-SH ENCFF449PID 307 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 355 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 197 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 201 bp overlap
SS18 1 dataset
ChIP NGP_ARID1A-mut1 GSE134626.SS18.NGP_ARID1A-mut1 213 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 82 bp overlap
Shox2 3 datasets
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
Motif DE_48h DE_48h-Shox2_MA0720.2 6 bp overlap
Motif DE_60h DE_60h-Shox2_MA0720.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TAF1 2 datasets
ChIP PFSK1 ENCSR000BQN.TAF1.PFSK1 195 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 214 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 341 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 330 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 457 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 457 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 251 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 142 bp overlap
ChIP SK-N-SH ENCFF270OWF 315 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 446 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 446 bp overlap
ChIP SK-N-SH ENCFF754TJT 222 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 304 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 282 bp overlap
TLX2 3 datasets
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
Motif DE_48h DE_48h-TLX2_MA1577.2 6 bp overlap
Motif DE_60h DE_60h-TLX2_MA1577.2 6 bp overlap
TOX 1 dataset
ChIP SK-N-SH ENCFF977TQV 173 bp overlap
TOX2 2 datasets
ChIP SK-N-SH ENCFF415OYE 267 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 271 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 177 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 482 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 353 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 353 bp overlap
UNCX 3 datasets
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
Motif DE_48h DE_48h-UNCX_MA0721.2 6 bp overlap
Motif DE_60h DE_60h-UNCX_MA0721.2 6 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 196 bp overlap
VAX1 3 datasets
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
Motif DE_48h DE_48h-VAX1_MA0722.2 7 bp overlap
Motif DE_60h DE_60h-VAX1_MA0722.2 7 bp overlap
VAX2 3 datasets
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
Motif DE_48h DE_48h-VAX2_MA0723.3 6 bp overlap
Motif DE_60h DE_60h-VAX2_MA0723.3 6 bp overlap
VSX1 3 datasets
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
Motif DE_48h DE_48h-VSX1_MA0725.2 7 bp overlap
Motif DE_60h DE_60h-VSX1_MA0725.2 7 bp overlap
VSX2 3 datasets
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
Motif DE_48h DE_48h-VSX2_MA0726.2 7 bp overlap
Motif DE_60h DE_60h-VSX2_MA0726.2 7 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 63 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 298 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 238 bp overlap
ZFP3 3 datasets
ChIP SK-N-SH ENCFF981MBE 314 bp overlap
ChIP SK-N-SH ENCFF981MBE 441 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 321 bp overlap
ZNF175 1 dataset
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 121 bp overlap
ZNF35 2 datasets
Motif DE_36h DE_36h-ZNF35_MA2333.1 7 bp overlap
Motif DE_48h DE_48h-ZNF35_MA2333.1 7 bp overlap
ZNF382 3 datasets
Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap
Motif DE_48h DE_48h-ZNF382_MA1594.1 24 bp overlap
Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap
ZNF558 1 dataset
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
ZNF565 1 dataset
ChIP SK-N-SH ENCFF372UGG 273 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 310 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 232 bp overlap
ZNF85 3 datasets
Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
mix-a 3 datasets
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap
Motif DE_48h DE_48h-mix-a_MA0621.2 7 bp overlap
Motif DE_60h DE_60h-mix-a_MA0621.2 7 bp overlap
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