chrX : 41,475,778 41,476,226
448 bp 137 TFs 0 linked genes
This 448 bp open chromatin element has no linked target genes and is bound by 137 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:41,470,778 – 41,481,226
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
137 transcription factors
Source
Cell type
ARID1A 4 datasets
ChIP HAP1 GSE108387.ARID1A.HAP1 448 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 216 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 62 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 64 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 289 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 267 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 349 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 327 bp overlap
BRD4 5 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 378 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 148 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 268 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 218 bp overlap
ChIP hESC GSE33281.BRD4.hESC 95 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 130 bp overlap
CEBPB 1 dataset
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 165 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 387 bp overlap
CTCF 3 datasets
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 265 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 448 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 164 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 281 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 271 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 185 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 216 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 173 bp overlap
EP300 4 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 290 bp overlap
ChIP Hep-G2 ENCSR000EDV.EP300.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF354ACD 191 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 141 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 264 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 125 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 388 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 197 bp overlap
GRHL2 3 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 77 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 135 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 100 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 270 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 162 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 115 bp overlap
HNF1B 1 dataset
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 366 bp overlap
HNF4A 6 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 113 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 316 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 290 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 231 bp overlap
ChIP HepG2 ENCFF146SSF 361 bp overlap
ChIP hiPSC GSE104613.HNF4A.hiPSC 363 bp overlap
HNF4G 1 dataset
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 169 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 301 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 312 bp overlap
JUN 2 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 199 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 395 bp overlap
JUND 1 dataset
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 253 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 142 bp overlap
KLF1 1 dataset
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 196 bp overlap
KLF5 2 datasets
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 348 bp overlap
KLF7 1 dataset
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 61 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 291 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 448 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 365 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 416 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 107 bp overlap
MED1 2 datasets
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 184 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 448 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 448 bp overlap
MLX 1 dataset
ChIP Hep-G2 ENCSR125DAD.MLX.Hep-G2 153 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 236 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 98 bp overlap
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 131 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 394 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 448 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 87 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 109 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 295 bp overlap
NEUROG2 5 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 174 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 188 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 164 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 160 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 145 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 225 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 318 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 239 bp overlap
NR2F6 2 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 367 bp overlap
ChIP HepG2 ENCFF429VKC 436 bp overlap
PATZ1 2 datasets
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
ChIP HepG2 ENCFF723PFC 214 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 264 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 379 bp overlap
PITX1 1 dataset
ChIP HepG2 ENCFF468QTQ 446 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 448 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 141 bp overlap
POU5F1 7 datasets
ChIP BG03 GSE21614.POU5F1.BG03 273 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 448 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 448 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 448 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 448 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 448 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 102 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 371 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 361 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 448 bp overlap
RAD21 6 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 448 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 448 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 448 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 103 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 179 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 142 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 295 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 448 bp overlap
RBPJ 3 datasets
ChIP GIC GSE79734.RBPJ.GIC 448 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 295 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 448 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 182 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 433 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 374 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 201 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 448 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 235 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 95 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 262 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 328 bp overlap
SMARCA4 7 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 376 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 171 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 247 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 283 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 56 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 448 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 448 bp overlap
SMARCB1 8 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 448 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 305 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 76 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 166 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 219 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 285 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 448 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 448 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 173 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 448 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 448 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 319 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 448 bp overlap
ChIP NPC GSE122631.SOX2.NPC 212 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 448 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 376 bp overlap
SP1 4 datasets
ChIP H1 ENCFF263FUH 51 bp overlap
ChIP Hep-G2 ENCSR000BJX.SP1.Hep-G2 211 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 170 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 413 bp overlap
SP2 1 dataset
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP4 3 datasets
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
ChIP H1 ENCFF473YOB 427 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 239 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 132 bp overlap
SP9 1 dataset
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
SRF 2 datasets
ChIP H1 ENCFF036PEF 225 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 260 bp overlap
STAT3 6 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 69 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 171 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 171 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 152 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 200 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 175 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 254 bp overlap
TAF1 4 datasets
ChIP H1 ENCFF478SZO 256 bp overlap
ChIP H1 ENCFF478SZO 448 bp overlap
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 325 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 448 bp overlap
TAF15 1 dataset
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 176 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 158 bp overlap
TBX2 1 dataset
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 269 bp overlap
TFAP2A 2 datasets
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 2 datasets
Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 4 datasets
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 448 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 377 bp overlap
TFAP2E 1 dataset
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TFAP4 2 datasets
ChIP HepG2 ENCFF932XOY 375 bp overlap
ChIP HepG2 ENCFF932XOY 145 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 179 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 200 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 183 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 228 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 266 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 448 bp overlap
ZFY 2 datasets
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 233 bp overlap
ChIP HepG2 ENCFF106ELT 448 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 275 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 448 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 139 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 101 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 448 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 448 bp overlap
ZNF44 1 dataset
ChIP Hep-G2 ENCSR914HPP.ZNF44.Hep-G2 172 bp overlap
ZNF440 1 dataset
ChIP HEK293T GSE78099.ZNF440.HEK293T 202 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 405 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Znf423 1 dataset
Motif ES_0h ES_0h-Znf423_MA0116.1 15 bp overlap