chr21 : 15,060,866 15,061,118
252 bp 122 TFs 1 linked gene
This 252 bp open chromatin element is linked to NRIP1 and is bound by 122 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NRIP1 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:15,055,866 – 15,066,118
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
122 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HCT-116 GSE47938.AFF4.HCT-116 252 bp overlap
ARID1B 3 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 252 bp overlap
ChIP K562 ENCFF938UXQ 252 bp overlap
ChIP K562 ENCFF938UXQ 172 bp overlap
ARID3A 3 datasets
ChIP K-562 ENCSR000EFY.ARID3A.K-562 244 bp overlap
ChIP K562 ENCFF728CDS 122 bp overlap
ChIP K562 ENCFF728CDS 252 bp overlap
ARNT 2 datasets
ChIP K-562 ENCSR613NUC.ARNT.K-562 252 bp overlap
ChIP K-562 ENCSR155KHM.ARNT.K-562 214 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 196 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 237 bp overlap
BRD2 3 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 198 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 198 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 155 bp overlap
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 89 bp overlap
BRD4 9 datasets
ChIP DND41_E GSE54379.BRD4.DND41_E 252 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 202 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 252 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 180 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 252 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 252 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 83 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 235 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 252 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 252 bp overlap
ChIP K562 ENCFF673OEZ 252 bp overlap
CCNT2 1 dataset
ChIP K-562 ENCSR000DOA.CCNT2.K-562 146 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 71 bp overlap
CDK9 1 dataset
ChIP A-375_DMSO GSE68052.CDK9.A-375_DMSO 170 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF189VBN 243 bp overlap
CHD1 1 dataset
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 187 bp overlap
CREM 1 dataset
ChIP HepG2 ENCFF049UDY 252 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 147 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 252 bp overlap
ChIP K562 ENCFF739JDE 252 bp overlap
ChIP K562 ENCFF775HUO 252 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF113OPQ 252 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 243 bp overlap
ChIP K562 ENCFF053BWO 252 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF886KFV 231 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 252 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 252 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 210 bp overlap
ChIP K562 ENCFF226VMS 252 bp overlap
EZH2 1 dataset
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 238 bp overlap
FOXA1 12 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 228 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 221 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 252 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 239 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 86 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 178 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 252 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 252 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 168 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 58 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 101 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 106 bp overlap
FOXA2 6 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 171 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 207 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 196 bp overlap
ChIP DE DE-FOXA2-1 252 bp overlap
ChIP DE DE-FOXA2-2 252 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 115 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR508DQA.FOXK2.K-562 248 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 235 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 135 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 236 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 203 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 113 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 252 bp overlap
ChIP DE DE-GATA4-2 252 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 252 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 226 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 252 bp overlap
ChIP DE DE-GATA6-2 252 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 252 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 252 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 252 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 252 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 252 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 252 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 230 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 208 bp overlap
ChIP K562 ENCFF928TKZ 252 bp overlap
ChIP K562 ENCFF968WBH 252 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 245 bp overlap
ChIP K562 ENCFF744ALD 252 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 209 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 252 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 122 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 83 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 206 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 252 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 215 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 252 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 252 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 252 bp overlap
KMT2A 8 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 252 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 131 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 252 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 252 bp overlap
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 192 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 195 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 57 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 82 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 252 bp overlap
LEF1 2 datasets
ChIP K-562 ENCSR343ELW.LEF1.K-562 231 bp overlap
ChIP K562 ENCFF198WCP 252 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 88 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 145 bp overlap
MLLT1 1 dataset
ChIP MV4-11 GSE82116.MLLT1.MV4-11 83 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR390VGH.MNT.K-562 252 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 235 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 196 bp overlap
NBN 2 datasets
ChIP K-562 ENCSR085QEV.NBN.K-562 252 bp overlap
ChIP K562 ENCFF146YTY 252 bp overlap
NCOR1 2 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 252 bp overlap
ChIP K562 ENCFF866HRM 252 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 128 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR657EOF.NFRKB.K-562 146 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 174 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 250 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 183 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 252 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 125 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF508UTS 252 bp overlap
ChIP HepG2 ENCFF508UTS 78 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 110 bp overlap
RAD21 1 dataset
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 252 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 160 bp overlap
RBBP5 1 dataset
ChIP K562 ENCFF070CVK 252 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 252 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 154 bp overlap
ChIP HepG2 ENCFF561IAJ 156 bp overlap
RELA 1 dataset
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 167 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 95 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 252 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 231 bp overlap
SIN3A 1 dataset
ChIP A-549 ENCSR513XQX.SIN3A.A-549 252 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 168 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 252 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 208 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 252 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 252 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 252 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 249 bp overlap
SMAD3 2 datasets
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 252 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 252 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 252 bp overlap
ChIP K562 ENCFF506JCB 252 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 252 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 252 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 252 bp overlap
ChIP K562 ENCFF690CFF 252 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 199 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 235 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 245 bp overlap
ChIP K562 ENCFF059YCJ 252 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 216 bp overlap
SPDEF 2 datasets
ChIP A-549 GSE86957.SPDEF.A-549 252 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 252 bp overlap
STAT3 2 datasets
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 86 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 90 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 220 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 252 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 231 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 145 bp overlap
TAL1 14 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 214 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 252 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 252 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 239 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 179 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 208 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 172 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 218 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 227 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 225 bp overlap
ChIP K562 ENCFF620GMX 129 bp overlap
ChIP K562 ENCFF620GMX 96 bp overlap
ChIP K562 ENCFF661CCK 232 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 124 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 252 bp overlap
ChIP K562 ENCFF931DJY 211 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 244 bp overlap
ChIP K562 ENCFF319QZT 252 bp overlap
TEAD1 1 dataset
ChIP MSTO GSE68170.TEAD1.MSTO 127 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 252 bp overlap
TRIM28 1 dataset
ChIP K562 ENCFF172UPN 252 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 252 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 252 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 239 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 142 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 118 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 252 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 248 bp overlap
ChIP K562 ENCFF795CMH 252 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 218 bp overlap
ZMYM3 1 dataset
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 141 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 244 bp overlap
ChIP K562 ENCFF352SDL 252 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 252 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 252 bp overlap
ZNF384 2 datasets
ChIP K-562 ENCSR000EFP.ZNF384.K-562 143 bp overlap
ChIP K562 ENCFF365NXQ 236 bp overlap