chr1 : 182,791,259 – 182,791,628
369 bp 123 TFs 1 linked gene
This 369 bp open chromatin element is linked to NPL and is bound by 123 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NPL 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:182,786,259 – 182,796,628
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
123 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 129 bp overlap
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 340 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 369 bp overlap
ChIP K562 ENCFF938UXQ 151 bp overlap
ARID3A 1 dataset
ChIP K-562 ENCSR000EFY.ARID3A.K-562 357 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 369 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 131 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 106 bp overlap
ATF3 1 dataset
ChIP K562 ENCFF921JQW 120 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 252 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 144 bp overlap
CBFA2T2 1 dataset
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 369 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 369 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 369 bp overlap
ChIP K562 ENCFF673OEZ 369 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 270 bp overlap
CREB3 1 dataset
ChIP K562 ENCFF985QJI 151 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 211 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF902MYN 154 bp overlap
DACH1 1 dataset
ChIP K-562 ENCSR030TJP.DACH1.K-562 194 bp overlap
DDX20 1 dataset
ChIP K-562 ENCSR446LAV.DDX20.K-562 257 bp overlap
DMTF1 1 dataset
ChIP K562 ENCFF947QUY 238 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 369 bp overlap
ChIP K562 ENCFF775HUO 369 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 130 bp overlap
E4F1 2 datasets
ChIP K562 ENCFF582AFY 202 bp overlap
ChIP K562 ENCFF622HMZ 93 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 213 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCFF692SMY 369 bp overlap
ELF2 1 dataset
ChIP K562 ENCFF787SME 269 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 100 bp overlap
EP400 2 datasets
ChIP K562 ENCFF850OZQ 369 bp overlap
ChIP K562 ENCFF850OZQ 217 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 369 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 326 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 369 bp overlap
ChIP DE DE-FOXA2-2 369 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 261 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR508DQA.FOXK2.K-562 173 bp overlap
ChIP K-562 ENCSR302AWT.FOXK2.K-562 242 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 54 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 369 bp overlap
ChIP erythroblast ENCFF867JAR 68 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 87 bp overlap
GATA2 5 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 353 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 244 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 119 bp overlap
ChIP K562 ENCFF544PCK 176 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 239 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 369 bp overlap
ChIP DE DE-GATA4-2 369 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 369 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 369 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 369 bp overlap
ChIP DE DE-GATA6-2 369 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 369 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 211 bp overlap
GFI1B 1 dataset
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 99 bp overlap
GMEB1 1 dataset
ChIP K-562 ENCSR928KOR.GMEB1.K-562 311 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 306 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 369 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 320 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 93 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 369 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 369 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 304 bp overlap
ChIP K562 ENCFF738SPU 225 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 302 bp overlap
HMG20A 1 dataset
ChIP K562 ENCFF840WDB 115 bp overlap
HSF1 1 dataset
ChIP BPE_HEAT GSE38901.HSF1.BPE_HEAT 65 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 136 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 369 bp overlap
ChIP K562 ENCFF348IBL 260 bp overlap
ChIP K562 ENCFF771OHZ 224 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 60 bp overlap
KDM1A 8 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 369 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 316 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 269 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 202 bp overlap
ChIP K562 ENCFF128TYE 178 bp overlap
ChIP K562 ENCFF133OLU 195 bp overlap
ChIP K562 ENCFF934ZRG 245 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 351 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 369 bp overlap
LEF1 1 dataset
ChIP K-562 ENCSR343ELW.LEF1.K-562 369 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 164 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 314 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 369 bp overlap
MLLT1 3 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 369 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 182 bp overlap
ChIP K562 ENCFF074XRJ 172 bp overlap
MNT 1 dataset
ChIP K562 ENCFF450LDL 350 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 222 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 369 bp overlap
ChIP K-562 ENCSR113LAS.MTA2.K-562 345 bp overlap
MYBL2 2 datasets
ChIP K-562 ENCSR162IEM.MYBL2.K-562 256 bp overlap
ChIP K562 ENCFF299JBQ 151 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 369 bp overlap
NCOA1 1 dataset
ChIP K-562 ENCSR658WFQ.NCOA1.K-562 280 bp overlap
NCOA6 1 dataset
ChIP K562 ENCFF471USR 68 bp overlap
NCOR1 2 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 369 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 369 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 220 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 227 bp overlap
NFATC3 1 dataset
ChIP K-562 ENCSR051OUX.NFATC3.K-562 252 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 187 bp overlap
NR2C2 2 datasets
ChIP K562 ENCFF750AXF 369 bp overlap
ChIP K562 ENCFF750AXF 240 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 369 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 369 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 141 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 185 bp overlap
PKNOX1 4 datasets
ChIP GM12878 ENCFF589FCY 308 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 251 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 333 bp overlap
ChIP K562 ENCFF236IUS 327 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 320 bp overlap
POLR2A 3 datasets
ChIP K562 ENCFF419GHN 85 bp overlap
ChIP K562 ENCFF836GHX 74 bp overlap
ChIP erythroblast ENCFF498VMR 122 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 138 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 178 bp overlap
RAD21 1 dataset
ChIP K562 ENCFF066JWO 185 bp overlap
RBBP5 1 dataset
ChIP K562 ENCFF070CVK 348 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 262 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 167 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 94 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR820GND.RNF2.K-562 159 bp overlap
SKIL 3 datasets
ChIP K562 ENCFF560QSF 203 bp overlap
ChIP K562 ENCFF560QSF 326 bp overlap
ChIP K562 ENCFF560QSF 93 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 369 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 179 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 78 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 65 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 369 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 191 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 60 bp overlap
SMARCA5 1 dataset
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 225 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 369 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 302 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 202 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 301 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 353 bp overlap
SP1 2 datasets
ChIP K562 ENCFF088XXV 369 bp overlap
ChIP K562 ENCFF088XXV 141 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 145 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 366 bp overlap
TAF9B 1 dataset
ChIP K562 ENCFF121ZIF 76 bp overlap
TAL1 8 datasets
ChIP K-562 GSE107726.TAL1.K-562 369 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 369 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 367 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 184 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 364 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 238 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 156 bp overlap
ChIP K562 ENCFF661CCK 266 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 131 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 369 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 52 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 369 bp overlap
TCFL5 1 dataset
ChIP K562 ENCFF187XYP 88 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF794ZXJ 200 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 212 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 158 bp overlap
TRIM28 1 dataset
ChIP K-562 ENCSR000BRW.TRIM28.K-562 114 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 70 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 201 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 232 bp overlap
ZBTB40 3 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 369 bp overlap
ChIP K562 ENCFF337GJB 104 bp overlap
ChIP K562 ENCFF521DSV 185 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 369 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 297 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 208 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 369 bp overlap
ChIP K562 ENCFF975RXS 261 bp overlap
ZKSCAN8 1 dataset
ChIP K562 ENCFF387ETI 187 bp overlap
ZNF175 4 datasets
ChIP K562 ENCFF497AEJ 120 bp overlap
ChIP K562 ENCFF497AEJ 369 bp overlap
ChIP K562 ENCFF497AEJ 369 bp overlap
ChIP K562 ENCFF497AEJ 66 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 90 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 369 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 369 bp overlap
ZNF274 1 dataset
ChIP K562 ENCFF187RMG 182 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 146 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 95 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 125 bp overlap
ZNF644 1 dataset
ChIP K562 ENCFF290PDB 85 bp overlap
ZNF83 1 dataset
ChIP K562 ENCFF340RTV 97 bp overlap
ZNF830 1 dataset
ChIP K562 ENCFF958IPC 121 bp overlap
ZSCAN29 1 dataset
ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 369 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 153 bp overlap
ZZZ3 2 datasets
ChIP K-562 ENCSR780BBJ.ZZZ3.K-562 239 bp overlap
ChIP K562 ENCFF845XAO 214 bp overlap
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