chr2 : 177,670,914 177,671,439
525 bp 139 TFs 0 linked genes
This 525 bp open chromatin element has no linked target genes and is bound by 139 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:177,665,914 – 177,676,439
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
139 transcription factors
Source
Cell type
ATF2 13 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
ChIP GM12878 ENCFF066HPG 390 bp overlap
ChIP GM12878 ENCFF521LQJ 385 bp overlap
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 349 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 274 bp overlap
ChIP H1 ENCFF295GZO 442 bp overlap
ChIP HEK293 ENCFF194VKZ 344 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 218 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 327 bp overlap
ChIP HepG2 ENCFF955VER 222 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 338 bp overlap
ChIP K562 ENCFF139ZZG 302 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 255 bp overlap
ATF3 1 dataset
Motif DE_12h DE_12h-ATF3_MA0605.3 10 bp overlap
ATF7 7 datasets
Motif DE_12h DE_12h-ATF7_MA0834.2 10 bp overlap
ChIP GM12878 ENCFF037PYH 392 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 331 bp overlap
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 279 bp overlap
ChIP HepG2 ENCFF470FKK 352 bp overlap
ChIP K-562 ENCSR972ZBV.ATF7.K-562 320 bp overlap
ChIP K562 ENCFF308SKS 466 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BCL6 1 dataset
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 279 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 207 bp overlap
BRD4 2 datasets
ChIP RH4 GSE83726.BRD4.RH4 324 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 154 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 460 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 201 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 220 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 204 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 456 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 190 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 383 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 175 bp overlap
Creb5 1 dataset
Motif DE_12h DE_12h-Creb5_MA0840.2 10 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 341 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV6 1 dataset
ChIP GM12878 GSE97661.ETV6.GM12878 180 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 144 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 79 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 274 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF4 1 dataset
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 240 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 160 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
JUN 10 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 449 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 448 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 348 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 239 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 525 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 387 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 525 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 459 bp overlap
ChIP HepG2 ENCFF401CRH 285 bp overlap
JUNB 2 datasets
Motif DE_12h DE_12h-JUNB_MA1140.3 11 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 234 bp overlap
JUND 5 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
ChIP H1 ENCFF010YXS 302 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 114 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 213 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 161 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 215 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 90 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 322 bp overlap
NANOG 7 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 451 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 169 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 525 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 372 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 503 bp overlap
ChIP hESC GSE18292.NANOG.hESC 198 bp overlap
NFIC 3 datasets
ChIP GM12878 ENCFF259FWL 398 bp overlap
ChIP GM12878 ENCFF259FWL 385 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 220 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 216 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 283 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 286 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 124 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 356 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 8 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 460 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 525 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 525 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 441 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 428 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 198 bp overlap
PPARG 1 dataset
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 372 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 136 bp overlap
RARB 1 dataset
Motif DE_12h DE_12h-RARB_MA1552.2 13 bp overlap
RARG 1 dataset
Motif DE_12h DE_12h-RARG_MA1553.2 13 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 170 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 129 bp overlap
RELA 5 datasets
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 75 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 179 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 184 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 114 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 160 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 155 bp overlap
RNF2 1 dataset
ChIP WA01 GSE104690.RNF2.WA01 213 bp overlap
RORA 2 datasets
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 208 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 226 bp overlap
SMARCA4 9 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 56 bp overlap
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 294 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 168 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 313 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 505 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 240 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 224 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 525 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 343 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 446 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 314 bp overlap
SMARCC1 6 datasets
ChIP G-401_NoDox GSE71504.SMARCC1.G-401_NoDox 190 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 219 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 165 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 422 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 263 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 375 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 525 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 359 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 254 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 185 bp overlap
SPI1 2 datasets
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 227 bp overlap
SPIB 3 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 215 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 248 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 13 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 190 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 216 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 525 bp overlap
ChIP OCI-Ly3 GSE50723.STAT3.OCI-Ly3 255 bp overlap
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 120 bp overlap
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 157 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 276 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 196 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 319 bp overlap
ChIP TMD8 GSE106844.STAT3.TMD8 525 bp overlap
ChIP TMD8_AZD1480 GSE106844.STAT3.TMD8_AZD1480 118 bp overlap
ChIP TMD8_DMSO GSE123398.STAT3.TMD8_DMSO 525 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 177 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 114 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Spz1 3 datasets
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Motif ES_0h ES_0h-Spz1_MA0111.1 11 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 335 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 230 bp overlap
TBX18 1 dataset
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 160 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 261 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 341 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 525 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 525 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 264 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 234 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 196 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 166 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF140 2 datasets
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 209 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap