chr1 : 36,481,699 36,482,274
575 bp 133 TFs 8 linked genes
This 575 bp open chromatin element is linked to 8 target genes and is bound by 133 transcription factors.
Linked Genes
8 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
CSF3R at TSS At TSS Proximity
MRPS15 17.7 kb Distal Multiome
OSCP1 31.6 kb Distal Multiome
LSM10 84.2 kb Distal Multiome
STK40 96.1 kb Distal Multiome
EVA1B 158.4 kb Distal Multiome
SH3D21 175.0 kb Distal Multiome
THRAP3 257.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:36,476,699 – 36,487,274
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
133 transcription factors
Source
Cell type
AFF1 3 datasets
ChIP K-562 ENCSR426URK.AFF1.K-562 193 bp overlap
ChIP K562 ENCFF583EEH 275 bp overlap
ChIP K562 ENCFF583EEH 63 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 141 bp overlap
ChIP K562 ENCFF938UXQ 230 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 305 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 397 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 437 bp overlap
BRD2 4 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 307 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 374 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 575 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 532 bp overlap
BRD3 7 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 196 bp overlap
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 295 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 575 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 314 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 575 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 55 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 53 bp overlap
BRD4 13 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 560 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 189 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 143 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 575 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 564 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 575 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 541 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 281 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 443 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 94 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 149 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 103 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 251 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 103 bp overlap
CHD1 1 dataset
ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 167 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 536 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 281 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 244 bp overlap
EGR1 8 datasets
ChIP HL-60_PMA GSE106359.EGR1.HL-60_PMA 127 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 118 bp overlap
ChIP HepG2 ENCFF674RQO 270 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 191 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 150 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 82 bp overlap
ChIP K562 ENCFF113OPQ 87 bp overlap
ChIP K562 ENCFF895KGN 113 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 333 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 102 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 162 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 358 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-2 340 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 173 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 265 bp overlap
ChIP K562 ENCFF245WKP 236 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 216 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 153 bp overlap
GATA2 9 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 350 bp overlap
ChIP K562 ENCFF544PCK 54 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 116 bp overlap
ChIP SH-SY5Y ENCFF485YIB 163 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 315 bp overlap
ChIP SK-N-SH ENCFF764OZD 178 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 67 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 192 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 199 bp overlap
GATA3 4 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 88 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 61 bp overlap
ChIP SH-SY5Y ENCFF475HYF 346 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 53 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 307 bp overlap
ChIP DE DE-GATA4-2 463 bp overlap
ChIP foregut GSE117136.GATA4.foregut 289 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 395 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 334 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 300 bp overlap
ChIP DE DE-GATA6-2 247 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 541 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 393 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 374 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 454 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 481 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 539 bp overlap
ChIP foregut GSE117136.GATA6.foregut 297 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 224 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 95 bp overlap
HBP1 2 datasets
ChIP HepG2 ENCFF512UDH 318 bp overlap
ChIP HepG2 ENCFF512UDH 83 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 303 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 295 bp overlap
ChIP K562 ENCFF968WBH 411 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 271 bp overlap
HDGF 4 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 535 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 464 bp overlap
ChIP K562 ENCFF195BET 431 bp overlap
ChIP K562 ENCFF682FBH 472 bp overlap
HMGXB4 3 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 66 bp overlap
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 174 bp overlap
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 60 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 352 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 248 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 194 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 575 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 372 bp overlap
ChIP K562 ENCFF348IBL 374 bp overlap
ChIP K562 ENCFF771OHZ 382 bp overlap
IKZF4 1 dataset
ChIP HepG2 ENCFF823YYW 341 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 356 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 297 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 196 bp overlap
KMT2A 4 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 147 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 575 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 210 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 98 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 575 bp overlap
ChIP K562 ENCFF320EQC 269 bp overlap
LEF1 1 dataset
ChIP K562 ENCFF198WCP 199 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 114 bp overlap
MAX 8 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 289 bp overlap
ChIP HepG2 ENCFF479OHI 465 bp overlap
ChIP HepG2 ENCFF507HCX 537 bp overlap
ChIP HepG2 ENCFF507HCX 335 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 192 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 79 bp overlap
ChIP K562 ENCFF110LJS 351 bp overlap
ChIP K562 ENCFF110LJS 176 bp overlap
MAZ 2 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 407 bp overlap
ChIP K562 ENCFF333ZIV 152 bp overlap
MGA 3 datasets
ChIP HepG2 ENCFF057YJE 567 bp overlap
ChIP HepG2 ENCFF057YJE 361 bp overlap
ChIP K562 ENCFF140CEX 496 bp overlap
MTA1 2 datasets
ChIP K-562 ENCSR807BGP.MTA1.K-562 294 bp overlap
ChIP K562 ENCFF230ZKA 288 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 429 bp overlap
MXD4 2 datasets
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 146 bp overlap
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 113 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 217 bp overlap
NBN 2 datasets
ChIP K-562 ENCSR085QEV.NBN.K-562 315 bp overlap
ChIP K562 ENCFF146YTY 329 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 210 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 115 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 262 bp overlap
NONO 1 dataset
ChIP K-562 ENCSR010KFT.NONO.K-562 157 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF689EWI 54 bp overlap
OTX1 1 dataset
ChIP K562 ENCFF829SLD 128 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 487 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 86 bp overlap
PKNOX1 3 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 414 bp overlap
ChIP K562 ENCFF236IUS 217 bp overlap
ChIP K562 ENCFF236IUS 127 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 163 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 292 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 73 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 437 bp overlap
RAD21 1 dataset
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 440 bp overlap
RB1 2 datasets
ChIP K-562 ENCSR506CVF.RB1.K-562 79 bp overlap
ChIP K562 ENCFF627ZBG 67 bp overlap
REST 1 dataset
ChIP K-562 GSE70482.REST.K-562 197 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR138FUZ.RNF2.K-562 237 bp overlap
ChIP K562 ENCFF653BQJ 565 bp overlap
RUNX1T1 2 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 245 bp overlap
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 189 bp overlap
SETDB1 1 dataset
ChIP HepG2 ENCFF878HLP 399 bp overlap
SIN3A 1 dataset
ChIP HepG2 ENCFF394WQQ 406 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 220 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 414 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 444 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 502 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 335 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 308 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 535 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 575 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 540 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 105 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 303 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 229 bp overlap
ChIP K562 ENCFF506JCB 225 bp overlap
SMARCA5 3 datasets
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 453 bp overlap
ChIP K562 ENCFF936KHY 407 bp overlap
ChIP K562 ENCFF936KHY 411 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 227 bp overlap
ChIP K562 ENCFF690CFF 129 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 370 bp overlap
SP4 1 dataset
ChIP HepG2 ENCFF865DSQ 352 bp overlap
SRSF1 1 dataset
ChIP HepG2 ENCFF509LHO 555 bp overlap
SRSF3 2 datasets
ChIP K-562 GSE120104.SRSF3.K-562 207 bp overlap
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 204 bp overlap
STAT3 1 dataset
ChIP Th1_IL-6_Mut3 GSE130810.STAT3.Th1_IL-6_Mut3 119 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 261 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 293 bp overlap
TAF7 1 dataset
ChIP K-562 ENCSR671GFC.TAF7.K-562 322 bp overlap
TAL1 1 dataset
ChIP K562 ENCFF620GMX 116 bp overlap
TARDBP 2 datasets
ChIP K-562 GSE120104.TARDBP.K-562 173 bp overlap
ChIP K562 ENCFF059WCS 295 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 155 bp overlap
TEAD1 3 datasets
ChIP K562 ENCFF254RJL 444 bp overlap
ChIP K562 ENCFF254RJL 214 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
TOE1 2 datasets
ChIP K562 ENCFF728FRA 421 bp overlap
ChIP K562 ENCFF728FRA 175 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 183 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 209 bp overlap
ChIP K562 ENCFF053XDV 120 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 304 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 127 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR322CFO.ZEB2.K-562 371 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 241 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 81 bp overlap
ChIP K562 ENCFF255RZG 152 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 250 bp overlap
ZFX 3 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 177 bp overlap
ChIP K562 ENCFF169LZT 302 bp overlap
ChIP K562 ENCFF536AJO 267 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 62 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 354 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 252 bp overlap
ZNF18 4 datasets
ChIP HEK293 ENCFF066NGR 160 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 394 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 180 bp overlap
ChIP HepG2 ENCFF479ZIQ 575 bp overlap
ZNF217 1 dataset
ChIP HepG2 ENCFF455XGO 170 bp overlap
ZNF280B 1 dataset
ChIP HepG2 ENCFF084BYB 404 bp overlap
ZNF407 2 datasets
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 309 bp overlap
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 110 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 245 bp overlap
ZNF48 1 dataset
ChIP HepG2 ENCFF362CDQ 223 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 567 bp overlap
ZNF567 1 dataset
ChIP HepG2 ENCFF284TJW 290 bp overlap
ZNF598 2 datasets
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 336 bp overlap
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 58 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 443 bp overlap
ZNF707 1 dataset
ChIP K562 ENCFF243WRW 301 bp overlap
ZNF740 4 datasets
ChIP HepG2 ENCFF298KPI 189 bp overlap
ChIP K-562 ENCSR737UST.ZNF740.K-562 104 bp overlap
ChIP K562 ENCFF505NFV 260 bp overlap
ChIP K562 ENCFF913GVQ 403 bp overlap
ZNF778 1 dataset
ChIP HepG2 ENCFF967DPC 370 bp overlap