chr6 : 28,446,917 28,447,342
425 bp 115 TFs 2 linked genes
This 425 bp open chromatin element is linked to COX11P1 and ZSCAN23 and is bound by 115 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
COX11P1 at TSS At TSS Proximity
ZSCAN23 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:28,441,917 – 28,452,342
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
115 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 425 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 425 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 162 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 418 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 201 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 365 bp overlap
BRD4 6 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 188 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 425 bp overlap
ChIP HEK293T GSE51633.BRD4.HEK293T 288 bp overlap
ChIP hESC GSE33281.BRD4.hESC 129 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 333 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 425 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CBX2 1 dataset
ChIP HepG2 ENCFF216GIL 220 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 206 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 259 bp overlap
ChIP BLaER1 ENCFF460KDD 251 bp overlap
DR1 1 dataset
ChIP HepG2 ENCFF818WYO 240 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 137 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 154 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 243 bp overlap
ChIP K562 ENCFF006PJY 219 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 174 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 166 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 269 bp overlap
ERG 1 dataset
ChIP ME-1 GSE46044.ERG.ME-1 339 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 279 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 333 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 403 bp overlap
EZH2 3 datasets
ChIP endothelial cell of umbilical vein ENCFF539AKL 367 bp overlap
ChIP keratinocyte ENCFF070STK 280 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 340 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 325 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 230 bp overlap
GABPB1 2 datasets
ChIP HepG2 ENCFF315AWN 425 bp overlap
ChIP HepG2 ENCFF315AWN 247 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 388 bp overlap
HDAC1 2 datasets
ChIP HepG2 ENCFF304IEJ 396 bp overlap
ChIP NB4 GSE126720.HDAC1.NB4 120 bp overlap
HMGXB4 2 datasets
ChIP WTC11 ENCFF962POR 425 bp overlap
ChIP WTC11 ENCFF962POR 323 bp overlap
HNRNPLL 3 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 248 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 241 bp overlap
ChIP HepG2 ENCFF952XAB 425 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 378 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 189 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 180 bp overlap
KDM1A 2 datasets
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 108 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 175 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 332 bp overlap
ChIP H1 ENCFF078LED 356 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 425 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 323 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 425 bp overlap
KMT2A 8 datasets
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 245 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 425 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 345 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 381 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 425 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 425 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 425 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 425 bp overlap
KMT2B 1 dataset
ChIP HEK293T_C-term_C49 GSE90762.KMT2B.HEK293T_C-term_C49 147 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 69 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 126 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 425 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 425 bp overlap
MNX1 1 dataset
ChIP HepG2 ENCFF938KYA 425 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 171 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 244 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 212 bp overlap
MYC 3 datasets
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 363 bp overlap
ChIP BE2C_SHWDR5 GSE70098.MYC.BE2C_SHWDR5 171 bp overlap
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 108 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 82 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 315 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 174 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 216 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 425 bp overlap
NR2F1 1 dataset
ChIP K562 ENCFF221HJH 247 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 239 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 197 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 186 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 162 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 425 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 57 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 425 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 156 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 375 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 425 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 425 bp overlap
ChIP H1 ENCFF566JSR 291 bp overlap
ChIP NB4 ENCFF780KAX 425 bp overlap
ChIP NB4 ENCFF780KAX 229 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 327 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 349 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 282 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 170 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 425 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 377 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 425 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 425 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 343 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 357 bp overlap
ChIP K562 ENCFF967GRF 425 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 394 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 298 bp overlap
SMAD3 1 dataset
ChIP WTC11 ENCFF815YYQ 357 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 249 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 246 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 228 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 358 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 203 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 425 bp overlap
TAF15 4 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 316 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 310 bp overlap
ChIP HepG2 ENCFF116QSW 370 bp overlap
ChIP HepG2 ENCFF406BOT 339 bp overlap
TARDBP 2 datasets
ChIP K-562 ENCSR429XTR.TARDBP.K-562 361 bp overlap
ChIP K-562 GSE120104.TARDBP.K-562 147 bp overlap
TBP 8 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 142 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 124 bp overlap
ChIP hESC GSE122298.TBP.hESC 253 bp overlap
ChIP hESC GSE122298.TBP.hESC 106 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 376 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 425 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 182 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 124 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 269 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 339 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH ENCFF182EBB 298 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 425 bp overlap
YY1 6 datasets
ChIP HEK293 ENCFF734SBY 159 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 425 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 370 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 129 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 131 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 206 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 425 bp overlap
ZBTB26 5 datasets
ChIP HEK293 ENCFF752POA 425 bp overlap
ChIP HEK293 ENCFF752POA 425 bp overlap
ChIP HEK293 ENCFF752TCU 425 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 425 bp overlap
ChIP HEK293 GSE76494.ZBTB26.HEK293 130 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 181 bp overlap
ChIP K562 ENCFF427SDV 390 bp overlap
ChIP K562 ENCFF875HLX 171 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 388 bp overlap
ZBTB6 4 datasets
ChIP HEK293 ENCFF881ECZ 163 bp overlap
ChIP HEK293 ENCFF881ECZ 310 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 310 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 165 bp overlap
ZBTB7A 4 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 172 bp overlap
ChIP Ishikawa ENCFF191NFH 373 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 138 bp overlap
ChIP K562 ENCFF579ZGM 292 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 238 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH ENCFF981MBE 404 bp overlap
ZFP37 2 datasets
ChIP HEK293 ENCFF968PWB 337 bp overlap
ChIP HEK293 ENCFF968PWB 126 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 262 bp overlap
ZNF143 3 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 112 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 161 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 104 bp overlap
ZNF146 2 datasets
ChIP HEK293 ENCFF602LWH 130 bp overlap
ChIP HEK293 ENCSR689YFA.ZNF146.HEK293 86 bp overlap
ZNF16 1 dataset
ChIP HEK293 ENCFF231FLW 227 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCFF308WOW 404 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 425 bp overlap
ZNF280B 1 dataset
ChIP HepG2 ENCFF084BYB 391 bp overlap
ZNF335 3 datasets
ChIP HEK293 ENCFF784SLD 343 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 108 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 149 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 349 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 155 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 120 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 404 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 169 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 66 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCFF399XKF 270 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 416 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 221 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCFF778UKJ 295 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 211 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 343 bp overlap
ZNF76 3 datasets
ChIP HEK293 ENCFF374TCG 127 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 118 bp overlap
ChIP HEK293 GSE76494.ZNF76.HEK293 153 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 332 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 213 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 266 bp overlap