chr4 : 153,487,308 153,487,896
588 bp 134 TFs 0 linked genes
This 588 bp open chromatin element has no linked target genes and is bound by 134 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:153,482,308 – 153,492,896
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
134 transcription factors
Source
Cell type
AHR 2 datasets
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 244 bp overlap
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 193 bp overlap
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 208 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 135 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 258 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 115 bp overlap
ASH2L 2 datasets
ChIP GM12878 ENCFF655FLB 135 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 372 bp overlap
BCL11A 7 datasets
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 92 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 73 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 100 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 114 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 126 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 183 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 64 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 303 bp overlap
BRD2 3 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 54 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 194 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 188 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 226 bp overlap
BRD4 15 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 259 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 52 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 191 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 101 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 404 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 175 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 158 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 271 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 236 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 152 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 90 bp overlap
ChIP OCI-AML3 GSE104745.BRD4.OCI-AML3 61 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 95 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 112 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 397 bp overlap
CDK8 1 dataset
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 106 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 204 bp overlap
CHD1 1 dataset
ChIP GM12878 ENCFF566UBH 196 bp overlap
CIITA 1 dataset
ChIP Raji_AB1 GSE52941.CIITA.Raji_AB1 235 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 223 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 241 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 212 bp overlap
CTCF 2 datasets
ChIP epithelial cell of prostate ENCFF086GTI 174 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 219 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 355 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 195 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 150 bp overlap
EGR1 1 dataset
ChIP GM12878 ENCFF092DJY 211 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 291 bp overlap
EP300 3 datasets
ChIP GM12878 ENCSR000BHB.EP300.GM12878 135 bp overlap
ChIP PC-3 GSE147455.EP300.PC-3 148 bp overlap
ChIP PC-3 GSE147455.EP300.PC-3 160 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 174 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 245 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 229 bp overlap
FOS 1 dataset
ChIP CD4_fly-DNA GSE116695.FOS.CD4_fly-DNA 185 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 120 bp overlap
GTF2F1 2 datasets
ChIP GM12878 ENCSR769ZTN.GTF2F1.GM12878 180 bp overlap
ChIP GM12878 ENCSR769ZTN.GTF2F1.GM12878 89 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 178 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 235 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 213 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 230 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 137 bp overlap
HDGF 2 datasets
ChIP GM12878 ENCFF653WYI 329 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 185 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 60 bp overlap
HOXB13 1 dataset
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 175 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 299 bp overlap
IRF1 1 dataset
ChIP monocyte_notreatment GSE100381.IRF1.monocyte_notreatment 51 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 74 bp overlap
IRF4 4 datasets
ChIP B-cell GSE142493.IRF4.B-cell 245 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 176 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 289 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 419 bp overlap
IRF5 1 dataset
ChIP GM12878 ENCSR976TBC.IRF5.GM12878 232 bp overlap
JMJD1C 1 dataset
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 244 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 185 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 165 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 159 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 157 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 205 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 437 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 357 bp overlap
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 71 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 411 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 352 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 304 bp overlap
KLF5 2 datasets
ChIP GM12878 ENCSR974OFJ.KLF5.GM12878 233 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 280 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 251 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 305 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 135 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 403 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCFF064TDQ 422 bp overlap
MED1 4 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 574 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 588 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 588 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 441 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 104 bp overlap
MEN1 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 241 bp overlap
MITF 2 datasets
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 253 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 588 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 162 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 176 bp overlap
MYC 2 datasets
ChIP P493-6 GSE77061.MYC.P493-6 286 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 136 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 263 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 360 bp overlap
NFATC2 1 dataset
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 121 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 199 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 193 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 258 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 272 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 119 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 244 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 248 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 459 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 111 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 588 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 170 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 384 bp overlap
POLR2A 12 datasets
ChIP GM12878 ENCFF412KAE 588 bp overlap
ChIP GM12878 ENCFF521FXC 353 bp overlap
ChIP GM12878 ENCFF631ERR 490 bp overlap
ChIP GM12878 ENCFF631ERR 336 bp overlap
ChIP GM12891 ENCFF127ICP 378 bp overlap
ChIP GM12892 ENCFF506PGQ 64 bp overlap
ChIP GM19099 ENCFF726IBN 321 bp overlap
ChIP GM19193 ENCFF599VTO 393 bp overlap
ChIP GM19193 ENCFF599VTO 91 bp overlap
ChIP HL-60 ENCFF321XKE 494 bp overlap
ChIP HL-60 ENCFF321XKE 157 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 341 bp overlap
POU2F2 2 datasets
ChIP GM12891 ENCFF166YPP 311 bp overlap
ChIP GM12891 ENCFF166YPP 311 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 115 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 527 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 194 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 245 bp overlap
RAD21 2 datasets
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 134 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 256 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 279 bp overlap
RELA 2 datasets
ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 165 bp overlap
ChIP GM12878 ENCSR664POU.RELA.GM12878 283 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE65427.RUNX1T1.Kasumi-1 159 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 258 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 215 bp overlap
SMAD2 3 datasets
ChIP hESC GSE29422.SMAD2.hESC 143 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 483 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 323 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 473 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 588 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 588 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 588 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 588 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 412 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 454 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 440 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 111 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 171 bp overlap
SMARCA5 2 datasets
ChIP GM12878 ENCFF327LDR 128 bp overlap
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 180 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 189 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 477 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 92 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 211 bp overlap
SMC3 2 datasets
ChIP GP5D GSE51234.SMC3.GP5D 135 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 229 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 152 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 427 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 252 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 225 bp overlap
SRF 1 dataset
ChIP GM12878 ENCSR041XML.SRF.GM12878 218 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 218 bp overlap
STAT3 1 dataset
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 208 bp overlap
SUZ12 1 dataset
ChIP MCF-7 ENCSR757EMK.SUZ12.MCF-7 157 bp overlap
TAF1 1 dataset
ChIP GM12891 ENCFF254YPA 337 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 214 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 341 bp overlap
ChIP GM12878 ENCSR016UEH.TARDBP.GM12878 218 bp overlap
TBX21 1 dataset
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 242 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 276 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 110 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 109 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 322 bp overlap
TP63 1 dataset
ChIP JHU-029 GSE88859.TP63.JHU-029 68 bp overlap
YY1 1 dataset
ChIP GM12878 ENCFF908JTL 345 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 202 bp overlap
ZBTB20 4 datasets
ChIP HEK293 ENCFF524ADK 174 bp overlap
ChIP HEK293 ENCFF524ADK 462 bp overlap
ChIP HEK293 ENCFF524ADK 484 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 243 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 357 bp overlap
ZFX 2 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 245 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 244 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 356 bp overlap
ZMYND8 1 dataset
ChIP HEK293_Flag-ZMYND8 GSE81696.ZMYND8.HEK293_Flag-ZMYND8 160 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 249 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 152 bp overlap
ZNF263 1 dataset
ChIP HEK293T GSE78099.ZNF263.HEK293T 115 bp overlap
ZNF319 1 dataset
ChIP K562 ENCFF561ZSB 345 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 429 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 320 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 388 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 275 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 240 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 267 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 221 bp overlap
ZNF646 1 dataset
ChIP HepG2 ENCFF141MBP 326 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCFF040AZE 441 bp overlap
ZNF8 1 dataset
ChIP HEK293 GSE76494.ZNF8.HEK293 226 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 396 bp overlap
ZSCAN18 1 dataset
ChIP HEK293 ENCFF537OVZ 343 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 307 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 355 bp overlap