chr3 : 170,203,920 170,204,467
547 bp 138 TFs 0 linked genes
This 547 bp open chromatin element has no linked target genes and is bound by 138 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:170,198,920 – 170,209,467
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
138 transcription factors
Source
Cell type
ARID3A 4 datasets
ChIP Hep-G2 GSE97661.ARID3A.Hep-G2 329 bp overlap
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 379 bp overlap
ChIP HepG2 ENCFF122GLS 369 bp overlap
ChIP HepG2 ENCFF341DES 308 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 170 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 547 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 102 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 335 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 425 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 541 bp overlap
BRD3 1 dataset
ChIP K-562 GSE140325.BRD3.K-562 148 bp overlap
BRD4 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 547 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 113 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 301 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 324 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 216 bp overlap
CREM 2 datasets
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 240 bp overlap
ChIP HepG2 ENCFF049UDY 383 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 231 bp overlap
CTCF 1 dataset
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 125 bp overlap
DLX6 1 dataset
ChIP Hep-G2 ENCSR272TOJ.DLX6.Hep-G2 326 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 174 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 362 bp overlap
E2F7 1 dataset
ChIP IMR-90_SENES_SHCTR GSE40343.E2F7.IMR-90_SENES_SHCTR 133 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 354 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 260 bp overlap
ELF1 4 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 403 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 223 bp overlap
ChIP HepG2 ENCFF367ZWV 344 bp overlap
ChIP HepG2 ENCFF838BCU 248 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 286 bp overlap
ELF4 1 dataset
ChIP HepG2 ENCFF752OAT 547 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 211 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 148 bp overlap
EP300 3 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 273 bp overlap
ChIP HepG2 ENCFF354ACD 303 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 169 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D1 GSE139377.ERG.aortic-endothelial-cell_D1 92 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 189 bp overlap
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 129 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 219 bp overlap
ETV1 1 dataset
ChIP GIST GSE22441.ETV1.GIST 116 bp overlap
ETV4 3 datasets
ChIP Hep-G2 ENCSR714YZG.ETV4.Hep-G2 201 bp overlap
ChIP HepG2 ENCFF381AMW 317 bp overlap
ChIP HepG2 ENCFF534CDD 326 bp overlap
FOSL2 4 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 175 bp overlap
ChIP HepG2 ENCFF548CXY 357 bp overlap
ChIP HepG2 ENCFF796NIA 257 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 243 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 235 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 400 bp overlap
ChIP DE DE-FOXA2-1 269 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 153 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 242 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 318 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 376 bp overlap
GABPA 2 datasets
ChIP Hep-G2 GSE72082.GABPA.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF180FFY 337 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 226 bp overlap
ChIP DE DE-GATA4-1 307 bp overlap
ChIP DE DE-GATA4-2 326 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 274 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 296 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 356 bp overlap
GATA6 9 datasets
ChIP AGS GSE51705.GATA6.AGS 189 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 547 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 547 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 547 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 547 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 547 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 547 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 125 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 270 bp overlap
GFI1 2 datasets
ChIP Hep-G2 ENCSR849FVL.GFI1.Hep-G2 263 bp overlap
ChIP HepG2 ENCFF472INF 429 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 405 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 220 bp overlap
HMGXB4 2 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 344 bp overlap
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 165 bp overlap
HNF1B 1 dataset
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 191 bp overlap
HNF4A 4 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 232 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 257 bp overlap
ChIP HepG2 ENCFF669NAM 261 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 153 bp overlap
HOXA3 1 dataset
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_36h DE_36h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif DE_36h DE_36h-HOXA5_MA0158.2 8 bp overlap
HOXB4 1 dataset
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 534 bp overlap
ChIP PANC-1 GSE119930.HOXB8.PANC-1 530 bp overlap
HOXC4 1 dataset
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
HOXD3 1 dataset
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 286 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 547 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 475 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 547 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 474 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 547 bp overlap
KDM1A 1 dataset
ChIP HepG2 ENCFF240UWG 502 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 283 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 318 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 546 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 238 bp overlap
MAFF 2 datasets
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 155 bp overlap
ChIP HepG2 ENCFF452YUT 277 bp overlap
MAFK 4 datasets
ChIP A549 ENCFF371EPR 363 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 196 bp overlap
ChIP HepG2 ENCFF743ZOF 241 bp overlap
ChIP HepG2 ENCFF767LDG 257 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 337 bp overlap
ChIP HepG2 ENCFF507HCX 407 bp overlap
MED1 1 dataset
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 365 bp overlap
MEF2A 1 dataset
ChIP Hep-G2 ENCSR291MJH.MEF2A.Hep-G2 534 bp overlap
MEF2D 1 dataset
ChIP HepG2 ENCFF576WDO 447 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap
MLX 1 dataset
ChIP Hep-G2 ENCSR125DAD.MLX.Hep-G2 229 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 345 bp overlap
ChIP Hep-G2 ENCSR000BRO.MYBL2.Hep-G2 159 bp overlap
NFIC 2 datasets
ChIP Hep-G2 ENCSR000BQX.NFIC.Hep-G2 230 bp overlap
ChIP HepG2 ENCFF169TKU 537 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 317 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR338MMB.NR2F2.liver 192 bp overlap
NR2F6 2 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 280 bp overlap
ChIP HepG2 ENCFF429VKC 310 bp overlap
ONECUT1 2 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 187 bp overlap
ChIP HepG2 ENCFF243FIR 341 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 421 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 210 bp overlap
PATZ1 2 datasets
ChIP HepG2 ENCFF723PFC 229 bp overlap
ChIP SK-N-SH ENCFF650NCN 280 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 547 bp overlap
ChIP HepG2 ENCFF526NOJ 490 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 332 bp overlap
PHF21A 3 datasets
ChIP Hep-G2 ENCSR315VYZ.PHF21A.Hep-G2 201 bp overlap
ChIP HepG2 ENCFF525EUW 428 bp overlap
ChIP HepG2 ENCFF525EUW 503 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 181 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 372 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 462 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 158 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 130 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 445 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 442 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 300 bp overlap
RFX3 1 dataset
ChIP Hep-G2 ENCSR633OVO.RFX3.Hep-G2 203 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 216 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 333 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 450 bp overlap
SIX1 2 datasets
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 348 bp overlap
ChIP HepG2 ENCFF587VYG 152 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 547 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 481 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 396 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 547 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 491 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 253 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 216 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 211 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 410 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 547 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH ENCFF449PID 337 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 285 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 394 bp overlap
SP1 3 datasets
ChIP Hep-G2 ENCSR000BJX.SP1.Hep-G2 133 bp overlap
ChIP HepG2 ENCFF123KAM 268 bp overlap
ChIP liver ENCFF597LFJ 485 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 146 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 547 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 547 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 256 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 233 bp overlap
TBX2 2 datasets
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 187 bp overlap
ChIP HepG2 ENCFF811TLA 428 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 240 bp overlap
WIZ 1 dataset
ChIP HepG2 ENCFF559CYZ 65 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 523 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 220 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 527 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 200 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 496 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 73 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 237 bp overlap
ZFP3 3 datasets
ChIP SK-N-SH ENCFF981MBE 395 bp overlap
ChIP SK-N-SH ENCFF981MBE 394 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 489 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 494 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 346 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 63 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 334 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 137 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 195 bp overlap
ZNF384 3 datasets
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 129 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 238 bp overlap
ChIP HepG2 ENCFF129PLC 187 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 294 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 218 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 146 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 103 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 201 bp overlap
ZNF770 3 datasets
ChIP HEK293 GSE76494.ZNF770.HEK293 151 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 147 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 271 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 297 bp overlap