chr2 : 225,399,863 – 225,400,500
637 bp 139 TFs 1 linked gene
This 637 bp open chromatin element is linked to NYAP2 and is bound by 139 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NYAP2 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:225,394,863 – 225,405,500
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
139 transcription factors
Source
Cell type
AR 3 datasets
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 220 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 211 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 354 bp overlap
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 261 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 290 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 219 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 268 bp overlap
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 457 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 119 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 371 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 328 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 206 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 449 bp overlap
BCL6B 2 datasets
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 269 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 122 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 113 bp overlap
BRD4 18 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 496 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 211 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 389 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 637 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 568 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 588 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 202 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 177 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 300 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 637 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 637 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 324 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 637 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 396 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 635 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 506 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 495 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 409 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 200 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 377 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 179 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 288 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 481 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 351 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 301 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 310 bp overlap
CTCF 4 datasets
ChIP RH4 GSE83726.CTCF.RH4 179 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 189 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 159 bp overlap
ChIP islet ERP004003.CTCF.islet 254 bp overlap
Ddit3::Cebpa 2 datasets
Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap
Motif ES_0h ES_0h-Ddit3Cebpa_MA0019.2 10 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 200 bp overlap
EHMT2 6 datasets
ChIP A-549 ENCSR321BJQ.EHMT2.A-549 393 bp overlap
ChIP A549 ENCFF026GWM 425 bp overlap
ChIP HepG2 ENCFF004KYI 637 bp overlap
ChIP HepG2 ENCFF004KYI 499 bp overlap
ChIP K-562 ENCSR175EOM.EHMT2.K-562 381 bp overlap
ChIP K562 ENCFF053BWO 161 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 327 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF829RWA 308 bp overlap
ChIP SK-N-SH ENCFF829RWA 76 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 198 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 292 bp overlap
ERF 2 datasets
Motif DE_12h DE_12h-ERF_MA0760.2 9 bp overlap
Motif ES_0h ES_0h-ERF_MA0760.2 9 bp overlap
ERF::FOXI1 2 datasets
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 2 datasets
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
Motif ES_0h ES_0h-ERFFOXO1_MA1936.2 12 bp overlap
ETV2 2 datasets
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
Motif ES_0h ES_0h-ETV2_MA0762.2 9 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif ES_0h ES_0h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif ES_0h ES_0h-ETV5FOXO1_MA1947.2 10 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
FLI1 2 datasets
Motif DE_12h DE_12h-FLI1_MA0475.3 9 bp overlap
Motif ES_0h ES_0h-FLI1_MA0475.3 9 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 153 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 172 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 74 bp overlap
ChIP SH-SY5Y ENCFF485YIB 277 bp overlap
ChIP SK-N-SH ENCFF764OZD 64 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 310 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 230 bp overlap
HDAC2 6 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP HepG2 ENCFF990GUQ 445 bp overlap
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 129 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 213 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 328 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 115 bp overlap
HIF1A 2 datasets
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 224 bp overlap
ChIP U2OS_trough_DMSO GSE85096.HIF1A.U2OS_trough_DMSO 199 bp overlap
HSF2 4 datasets
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
Motif DE_24h DE_24h-HSF2_MA0770.1 13 bp overlap
Motif DE_36h DE_36h-HSF2_MA0770.1 13 bp overlap
Motif ES_0h ES_0h-HSF2_MA0770.1 13 bp overlap
IKZF1 4 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap
IRF2 2 datasets
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
IRF4 2 datasets
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
Motif ES_0h ES_0h-IRF4_MA1419.2 14 bp overlap
IRF5 2 datasets
Motif DE_12h DE_12h-IRF5_MA1420.1 14 bp overlap
Motif ES_0h ES_0h-IRF5_MA1420.1 14 bp overlap
IRF7 2 datasets
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap
IRF8 2 datasets
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
Motif ES_0h ES_0h-IRF8_MA0652.2 13 bp overlap
ISL1 3 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 149 bp overlap
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 205 bp overlap
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 71 bp overlap
ISL2 2 datasets
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
Irf1 4 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 263 bp overlap
KLF5 4 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 198 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 220 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 179 bp overlap
MECOM 1 dataset
ChIP SKH1 GSE102697.MECOM.SKH1 230 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 232 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MIER1 2 datasets
ChIP K-562 ENCSR426MDV.MIER1.K-562 392 bp overlap
ChIP K562 ENCFF584AYC 497 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 279 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 319 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 127 bp overlap
MXI1 3 datasets
ChIP SK-N-SH ENCFF746HVJ 66 bp overlap
ChIP neural cell ENCFF623HQN 527 bp overlap
ChIP neural cell ENCFF623HQN 417 bp overlap
MYB 2 datasets
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 497 bp overlap
MYCN 3 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 163 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 197 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 298 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 312 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 173 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 134 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 166 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 328 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 287 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
Nfat5 2 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nkx3-1 2 datasets
Motif DE_12h DE_12h-Nkx3-1_MA0124.3 7 bp overlap
Motif ES_0h ES_0h-Nkx3-1_MA0124.3 7 bp overlap
ONECUT2 1 dataset
ChIP Hep-G2 ENCSR661PKJ.ONECUT2.Hep-G2 115 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 128 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 128 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 159 bp overlap
PITX3 2 datasets
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 506 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 58 bp overlap
POLR2A 4 datasets
ChIP body of pancreas ENCFF501FEC 230 bp overlap
ChIP body of pancreas ENCFF675RCN 179 bp overlap
ChIP body of pancreas ENCFF675RCN 366 bp overlap
ChIP neural cell ENCFF604SPB 291 bp overlap
PRDM1 2 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
PRDM9 4 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RAD21 12 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 256 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 167 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 144 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 170 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 167 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 347 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 272 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 169 bp overlap
ChIP neural cell ENCFF564MOT 132 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 351 bp overlap
REST 77 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 637 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 637 bp overlap
ChIP A549 ENCFF148AIS 549 bp overlap
ChIP CD4 GSE49570.REST.CD4 313 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif DE_24h DE_24h-REST_MA0138.3 20 bp overlap
Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP GM12878 ENCFF235NGC 219 bp overlap
ChIP GM12878 ENCFF943QPB 236 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 366 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 460 bp overlap
ChIP GM23338 ENCFF024TCL 248 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 507 bp overlap
ChIP GP5D GSE51234.REST.GP5D 621 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 637 bp overlap
ChIP H1 ENCFF203SWY 507 bp overlap
ChIP H1 ENCFF429RUE 303 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 637 bp overlap
ChIP HCT116 ENCFF929AYY 282 bp overlap
ChIP HEK293 ENCFF073DOT 273 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 452 bp overlap
ChIP HL-60 ENCFF589LOF 371 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 637 bp overlap
ChIP HeLa-S3 ENCFF911DTC 257 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 501 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 637 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 306 bp overlap
ChIP HepG2 ENCFF122AWR 315 bp overlap
ChIP HepG2 ENCFF800JSL 227 bp overlap
ChIP Ishikawa ENCFF456OHV 418 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 637 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 637 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 491 bp overlap
ChIP K-562 GSE70482.REST.K-562 328 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 341 bp overlap
ChIP K562 ENCFF430APM 230 bp overlap
ChIP K562 ENCFF685YZN 411 bp overlap
ChIP K562 ENCFF688UKW 392 bp overlap
ChIP K562 ENCFF758CZL 491 bp overlap
ChIP MCF-7 ENCFF893RRD 341 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 637 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 310 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 281 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 637 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 504 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 354 bp overlap
ChIP PFSK-1 ENCFF668WMP 219 bp overlap
ChIP PFSK-1 ENCFF845VHA 326 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 367 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 539 bp overlap
ChIP Panc1 ENCFF338WSQ 209 bp overlap
ChIP Panc1 ENCFF518EEQ 368 bp overlap
ChIP Panc1 ENCFF629OJO 216 bp overlap
ChIP SK-N-SH ENCFF635KBN 279 bp overlap
ChIP SK-N-SH ENCFF861MKH 198 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 252 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 637 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 521 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 323 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 517 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 637 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 637 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 637 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 378 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 353 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 317 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 307 bp overlap
ChIP hippocampus GSE144226.REST.hippocampus 411 bp overlap
ChIP liver ENCFF240FWT 276 bp overlap
ChIP liver ENCFF577AZT 304 bp overlap
ChIP liver ENCSR893QWP.REST.liver 470 bp overlap
ChIP liver ENCSR867WPH.REST.liver 314 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 637 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.REST.metastatic-neuroblastoma_SKNMM 317 bp overlap
ChIP neural ENCSR000BTV.REST.neural 539 bp overlap
ChIP neural cell ENCFF882LXX 242 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 191 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 316 bp overlap
SIN3A 6 datasets
ChIP H1 ENCFF042ZSL 521 bp overlap
ChIP H1 ENCFF896IJG 301 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 196 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 147 bp overlap
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 162 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 180 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMARCA4 23 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 315 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 296 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 239 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 363 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 349 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 323 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.SMARCA4.MCF-7_ARID1A-KO 241 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 282 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 305 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 352 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 303 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 535 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 293 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 261 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 192 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 216 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 248 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 223 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 195 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 199 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 235 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 321 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 230 bp overlap
SMARCB1 8 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 297 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 320 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 299 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 291 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 362 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 379 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 293 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 205 bp overlap
SMARCC1 7 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 260 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 555 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 171 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 265 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 149 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 375 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 323 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 184 bp overlap
SMC1A 1 dataset
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 149 bp overlap
SMC3 5 datasets
ChIP HeLa GSE126990.SMC3.HeLa 293 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 293 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 293 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 496 bp overlap
ChIP neural cell ENCFF795YGY 531 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 337 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 271 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP140L 1 dataset
ChIP Hep-G2 ENCSR107DKT.SP140L.Hep-G2 161 bp overlap
SP2 2 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 178 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TAF1 2 datasets
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 155 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 490 bp overlap
TEAD4 2 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 288 bp overlap
ChIP A549 ENCFF243FTL 173 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 141 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 268 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 136 bp overlap
WIZ 1 dataset
ChIP HepG2 ENCFF559CYZ 581 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 196 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 231 bp overlap
ZNF143 2 datasets
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 153 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 128 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 461 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF382 2 datasets
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
Motif ES_0h ES_0h-ZNF382_MA1594.1 24 bp overlap
ZNF449 2 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF652 1 dataset
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 126 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF766 2 datasets
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
ZNF784 2 datasets
Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap
Motif ES_0h ES_0h-ZNF784_MA1717.2 8 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 294 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
Huangfu Lab · Publications · Resources · Contact