chr19:52,026,275–52,027,092

chr19 : 52,026,275 – 52,027,092

817 bp 153 TFs 11 linked genes

This 817 bp open chromatin element is linked to 11 target genes and is bound by 153 transcription factors.

Linked Genes

11 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ZNF614		1.3 kb	Proximal	Proximity
ZNF615		18.5 kb	Distal	Multiome
ZNF432		69.0 kb	Distal	Multiome
ZNF613		99.5 kb	Distal	Multiome
ZNF616		113.2 kb	Distal	Multiome
ZNF649		121.7 kb	Distal	Multiome
ZNF577		138.7 kb	Distal	Multiome
ZNF836		145.0 kb	Distal	Multiome
PPP2R1A		163.3 kb	Distal	Multiome
ZNF766		242.9 kb	Distal	Multiome
ZNF480		270.5 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

153 transcription factors

ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 182 bp overlap

ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 164 bp overlap

ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 274 bp overlap

ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 384 bp overlap

ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 817 bp overlap

ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 180 bp overlap

ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 521 bp overlap

ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 500 bp overlap

ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 250 bp overlap

ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 210 bp overlap

ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 133 bp overlap

ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 198 bp overlap

ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 253 bp overlap

ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 348 bp overlap

ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 142 bp overlap

ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 64 bp overlap

ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 142 bp overlap

ARID3A 2 datasets

ChIP HepG2 ENCFF341DES 455 bp overlap

ChIP HepG2 ENCFF341DES 525 bp overlap

ARID4A 1 dataset

ChIP HepG2 ENCFF142DIE 520 bp overlap

ARID4B 3 datasets

ChIP HepG2 ENCFF519OXJ 304 bp overlap

ChIP HepG2 ENCFF519OXJ 557 bp overlap

ChIP HepG2 ENCFF519OXJ 166 bp overlap

ARID5B 1 dataset

ChIP HepG2 ENCFF964FWK 243 bp overlap

ARNTL 1 dataset

ChIP HepG2 ENCFF217GCH 374 bp overlap

ChIP HepG2 ENCFF349HFU 421 bp overlap

CREB1 1 dataset

ChIP HepG2 ENCFF576ERP 472 bp overlap

ChIP HepG2 ENCFF049UDY 507 bp overlap

CSRNP1 1 dataset

ChIP HepG2 ENCFF191UYG 545 bp overlap

DMAP1 2 datasets

ChIP HepG2 ENCFF247MSU 173 bp overlap

ChIP HepG2 ENCFF247MSU 489 bp overlap

ChIP HepG2 ENCFF700HHQ 282 bp overlap

E2F1 2 datasets

ChIP HepG2 ENCFF919WXY 178 bp overlap

ChIP HepG2 ENCFF919WXY 396 bp overlap

ChIP HepG2 ENCFF633ULY 343 bp overlap

ChIP HepG2 ENCFF752OAT 719 bp overlap

EP300 1 dataset

ChIP HepG2 ENCFF076TMZ 365 bp overlap

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 136 bp overlap

ETV2::HOXB13 1 dataset

Motif DE_72h DE_72h-ETV2HOXB13_MA1943.2 13 bp overlap

ChIP HepG2 ENCFF456LSA 299 bp overlap

FIGLA 1 dataset

Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap

FOSL2 1 dataset

ChIP HepG2 ENCFF548CXY 292 bp overlap

FOXA1 4 datasets

ChIP HepG2 ENCFF207NVJ 200 bp overlap

ChIP HepG2 ENCFF361KNY 162 bp overlap

ChIP HepG2 ENCFF740VZW 145 bp overlap

ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 60 bp overlap

FOXA2 6 datasets

ChIP DE DE-FOXA2-1 817 bp overlap

ChIP DE DE-FOXA2-2 817 bp overlap

ChIP HepG2 ENCFF533COJ 130 bp overlap

ChIP HepG2 ENCFF533COJ 297 bp overlap

ChIP HepG2 ENCFF570ABM 268 bp overlap

ChIP HepG2 ENCFF894AYY 241 bp overlap

FOXA3 1 dataset

ChIP HepG2 ENCFF005KGL 218 bp overlap

FOXP1 2 datasets

ChIP HepG2 ENCFF823ERM 269 bp overlap

ChIP HepG2 ENCFF823ERM 341 bp overlap

GABPB1 1 dataset

ChIP WTC11 ENCFF166QKI 169 bp overlap

GATA2 1 dataset

ChIP HepG2 ENCFF905PYM 288 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 817 bp overlap

ChIP DE DE-GATA4-2 817 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-1 802 bp overlap

ChIP DE DE-GATA6-2 817 bp overlap

GATAD2A 1 dataset

ChIP HepG2 ENCFF252XNH 189 bp overlap

Motif DE_72h DE_72h-GCM1_MA0646.2 10 bp overlap

ChIP HepG2 ENCFF472INF 378 bp overlap

HDAC1 1 dataset

ChIP HepG2 ENCFF304IEJ 444 bp overlap

HDAC2 2 datasets

ChIP HepG2 ENCFF990GUQ 336 bp overlap

ChIP HepG2 ENCFF990GUQ 445 bp overlap

HDAC3 1 dataset

ChIP VCaP_DHAT_2H GSE28950.HDAC3.VCaP_DHAT_2H 175 bp overlap

HNF1A 3 datasets

ChIP HepG2 ENCFF352VYI 341 bp overlap

ChIP HepG2 ENCFF540TRC 171 bp overlap

ChIP HepG2 ENCFF540TRC 537 bp overlap

HNF1B 2 datasets

ChIP HepG2 ENCFF928THX 422 bp overlap

ChIP HepG2 ENCFF928THX 505 bp overlap

HOMEZ 1 dataset

ChIP HepG2 ENCFF800ZQH 322 bp overlap

HOXA10 1 dataset

ChIP HepG2 ENCFF422LBU 364 bp overlap

HOXA3 1 dataset

ChIP HepG2 ENCFF374TCI 445 bp overlap

ChIP HepG2 ENCFF532TQV 340 bp overlap

ChIP HepG2 ENCFF350YLO 531 bp overlap

ChIP HepG2 ENCFF613PTN 640 bp overlap

ChIP HepG2 ENCFF890JFC 358 bp overlap

KDM6A 1 dataset

ChIP HepG2 ENCFF135ECT 272 bp overlap

KLF12 1 dataset

ChIP HepG2 ENCFF395LSO 557 bp overlap

KLF16 2 datasets

ChIP HepG2 ENCFF969FFI 349 bp overlap

ChIP HepG2 ENCFF969FFI 553 bp overlap

ChIP HepG2 ENCFF499KCU 150 bp overlap

ChIP HepG2 ENCFF479OHI 358 bp overlap

ChIP HepG2 ENCFF479OHI 485 bp overlap

ChIP HepG2 ENCFF507HCX 314 bp overlap

ChIP HepG2 ENCFF507HCX 617 bp overlap

ChIP HepG2 ENCFF507HCX 577 bp overlap

ChIP HepG2 ENCFF785HSD 384 bp overlap

ChIP HepG2 ENCFF495TSS 331 bp overlap

ChIP HepG2 ENCFF057YJE 471 bp overlap

ChIP HepG2 ENCFF057YJE 676 bp overlap

MIXL1 1 dataset

ChIP HepG2 ENCFF817YFO 313 bp overlap

ChIP HepG2 ENCFF652PXN 259 bp overlap

ChIP HepG2 ENCFF701PYP 346 bp overlap

ChIP HepG2 ENCFF575FXK 525 bp overlap

ChIP HepG2 ENCFF575FXK 525 bp overlap

ChIP HepG2 ENCFF575FXK 353 bp overlap

NAIF1 2 datasets

ChIP HepG2 ENCFF291NIS 640 bp overlap

ChIP HepG2 ENCFF291NIS 691 bp overlap

NCOA2 1 dataset

ChIP HepG2 ENCFF853BJJ 333 bp overlap

NFIL3 1 dataset

ChIP HepG2 ENCFF686VLI 288 bp overlap

NKX3-1 1 dataset

ChIP HepG2 ENCFF031ZWH 408 bp overlap

NONO 3 datasets

ChIP HepG2 ENCFF361UQH 596 bp overlap

ChIP HepG2 ENCFF361UQH 601 bp overlap

ChIP HepG2 ENCFF361UQH 406 bp overlap

NR0B2 2 datasets

ChIP HepG2 ENCFF071MVY 370 bp overlap

ChIP HepG2 ENCFF071MVY 441 bp overlap

NR2F6 2 datasets

ChIP HepG2 ENCFF429VKC 421 bp overlap

ChIP HepG2 ENCFF514UJI 284 bp overlap

ONECUT1 3 datasets

ChIP HepG2 ENCFF243FIR 289 bp overlap

ChIP HepG2 ENCFF243FIR 268 bp overlap

ChIP HepG2 ENCFF243FIR 65 bp overlap

ONECUT2 1 dataset

ChIP HepG2 ENCFF460COO 239 bp overlap

PATZ1 1 dataset

ChIP HepG2 ENCFF723PFC 401 bp overlap

ChIP HepG2 ENCFF986SDH 377 bp overlap

PAXIP1 1 dataset

ChIP HepG2 ENCFF526NOJ 400 bp overlap

PHF20 1 dataset

ChIP HepG2 ENCFF609JBM 256 bp overlap

PITX1 1 dataset

ChIP HepG2 ENCFF468QTQ 237 bp overlap

PKNOX2 1 dataset

Motif DE_72h DE_72h-PKNOX2_MA0783.1 12 bp overlap

ChIP HepG2 ENCFF153UUK 517 bp overlap

POLR2A 2 datasets

ChIP HepG2 ENCFF718XAJ 421 bp overlap

ChIP HepG2 ENCFF736SLT 457 bp overlap

POLR2G 2 datasets

ChIP HepG2 ENCFF241AEG 547 bp overlap

ChIP HepG2 ENCFF508UTS 348 bp overlap

PRDM15 1 dataset

ChIP HepG2 ENCFF259LUZ 398 bp overlap

PROX1 1 dataset

ChIP HepG2 ENCFF016ZJS 481 bp overlap

Ptf1A 1 dataset

Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap

ChIP HepG2 ENCFF582XUA 326 bp overlap

RBFOX2 4 datasets

ChIP HepG2 ENCFF554DMZ 317 bp overlap

ChIP HepG2 ENCFF554DMZ 685 bp overlap

ChIP HepG2 ENCFF939HTZ 649 bp overlap

ChIP HepG2 ENCFF939HTZ 652 bp overlap

RFXAP 1 dataset

ChIP HepG2 ENCFF359QOX 505 bp overlap

RNF219 1 dataset

ChIP HepG2 ENCFF710YJO 280 bp overlap

RREB1 1 dataset

ChIP HepG2 ENCFF986CSN 262 bp overlap

RUNX1 1 dataset

ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 107 bp overlap

ChIP HepG2 ENCFF539ZAY 265 bp overlap

SAP130 1 dataset

ChIP HepG2 ENCFF892EHZ 355 bp overlap

SATB2 2 datasets

ChIP HepG2 ENCFF749IAK 354 bp overlap

ChIP HepG2 ENCFF749IAK 286 bp overlap

SETDB1 1 dataset

ChIP K562 ENCFF348FRY 73 bp overlap

ChIP HepG2 ENCFF587VYG 274 bp overlap

SMAD4 1 dataset

ChIP HepG2 ENCFF615GTE 277 bp overlap

SNAI2 1 dataset

Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap

SNAPC2 1 dataset

ChIP HepG2 ENCFF237IWR 513 bp overlap

SOX13 5 datasets

Motif DE_72h DE_72h-SOX13_MA1120.2 7 bp overlap

ChIP HepG2 ENCFF062VSQ 298 bp overlap

ChIP HepG2 ENCFF062VSQ 407 bp overlap

ChIP HepG2 ENCFF231PAK 341 bp overlap

ChIP HepG2 ENCFF231PAK 341 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 621 bp overlap

Motif DE_72h DE_72h-SOX2_MA0143.5 7 bp overlap

ChIP HepG2 ENCFF470KZD 265 bp overlap

SOX6 2 datasets

ChIP HepG2 ENCFF767OCK 465 bp overlap

ChIP HepG2 ENCFF767OCK 581 bp overlap

ChIP HepG2 ENCFF123KAM 325 bp overlap

SP140L 1 dataset

ChIP HepG2 ENCFF203CWF 481 bp overlap

ChIP K562 ENCFF410ORC 205 bp overlap

Motif DE_72h DE_72h-Sox3_MA0514.3 7 bp overlap

Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap

ChIP HepG2 ENCFF946IUP 438 bp overlap

TARDBP 1 dataset

ChIP HepG2 ENCFF356JNC 395 bp overlap

ChIP HepG2 ENCFF023IVD 308 bp overlap

TBX2 2 datasets

ChIP HepG2 ENCFF811TLA 461 bp overlap

ChIP HepG2 ENCFF811TLA 621 bp overlap

ChIP HepG2 ENCFF628OFQ 319 bp overlap

TCF7L2 1 dataset

ChIP HepG2 ENCFF510OLG 451 bp overlap

TEAD1 1 dataset

Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap

TEAD2 1 dataset

Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap

TEAD3 2 datasets

Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap

ChIP HepG2 ENCFF054UUL 292 bp overlap

TEAD4 2 datasets

Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap

ChIP HepG2 ENCFF250NXO 311 bp overlap

TFDP1 1 dataset

ChIP HepG2 ENCFF717XKC 297 bp overlap

ChIP HepG2 ENCFF268PFH 322 bp overlap

TGIF1 1 dataset

Motif DE_72h DE_72h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_72h DE_72h-TGIF2_MA0797.1 12 bp overlap

TGIF2LX 1 dataset

Motif DE_72h DE_72h-TGIF2LX_MA1571.1 12 bp overlap

TGIF2LY 1 dataset

Motif DE_72h DE_72h-TGIF2LY_MA1572.1 12 bp overlap

ChIP SUIT-2 GSE115461.TP63.SUIT-2 76 bp overlap

ChIP HepG2 ENCFF160WNN 461 bp overlap

YEATS4 1 dataset

ChIP HepG2 ENCFF340OIC 555 bp overlap

ZBTB40 1 dataset

ChIP HepG2 ENCFF130IRD 492 bp overlap

Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap

ZFP36L1 1 dataset

ChIP HepG2 ENCFF375BAZ 408 bp overlap

ChIP HepG2 ENCFF016NZF 550 bp overlap

ChIP HepG2 ENCFF016NZF 691 bp overlap

ChIP HepG2 ENCFF106ELT 538 bp overlap

ZGPAT 1 dataset

ChIP HepG2 ENCFF055YSO 552 bp overlap

ZKSCAN5 1 dataset

Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap

ZMYM4 1 dataset

ChIP HepG2 ENCFF567SQY 428 bp overlap

ZNF142 1 dataset

ChIP HepG2 ENCFF422TCB 407 bp overlap

ZNF230 1 dataset

ChIP HepG2 ENCFF370ATB 475 bp overlap

ZNF232 2 datasets

ChIP HepG2 ENCFF905UTT 441 bp overlap

ChIP HepG2 ENCFF905UTT 261 bp overlap

ZNF292 2 datasets

ChIP HepG2 ENCFF975MAJ 448 bp overlap

ChIP HepG2 ENCFF975MAJ 541 bp overlap

ZNF317 1 dataset

Motif DE_72h DE_72h-ZNF317_MA1593.2 8 bp overlap

ZNF335 2 datasets

ChIP HepG2 ENCFF539IIQ 446 bp overlap

ChIP HepG2 ENCFF539IIQ 675 bp overlap

ZNF350 1 dataset

ChIP HepG2 ENCFF595LWL 681 bp overlap

ZNF430 1 dataset

ChIP HepG2 ENCFF967HQR 574 bp overlap

ZNF441 1 dataset

ChIP HepG2 ENCFF738UDK 313 bp overlap

ZNF48 1 dataset

ChIP HepG2 ENCFF362CDQ 496 bp overlap

ZNF483 1 dataset

ChIP HepG2 ENCFF464ZKH 400 bp overlap

ZNF501 1 dataset

ChIP HepG2 ENCFF879XZR 700 bp overlap

ZNF503 2 datasets

ChIP HepG2 ENCFF923HZL 501 bp overlap

ChIP HepG2 ENCFF923HZL 291 bp overlap

ZNF556 1 dataset

ChIP HepG2 ENCFF008WIK 430 bp overlap

ZNF574 2 datasets

ChIP HepG2 ENCFF206MMY 395 bp overlap

ChIP HepG2 ENCFF206MMY 571 bp overlap

ZNF609 2 datasets

ChIP HepG2 ENCFF900FRP 379 bp overlap

ChIP HepG2 ENCFF900FRP 491 bp overlap

ZNF614 2 datasets

ChIP HepG2 ENCFF677IUD 371 bp overlap

ChIP HepG2 ENCFF677IUD 485 bp overlap

ZNF644 1 dataset

ChIP HepG2 ENCFF352VGJ 277 bp overlap

ZNF75D 1 dataset

Motif DE_72h DE_72h-ZNF75D_MA1601.2 12 bp overlap

ZNF761 1 dataset

ChIP HepG2 ENCFF761IOF 495 bp overlap

ZSCAN21 1 dataset

ChIP HepG2 ENCFF676MFO 374 bp overlap

ZSCAN29 1 dataset

ChIP HepG2 ENCFF212SBM 459 bp overlap

ZSCAN5A 2 datasets

ChIP HepG2 ENCFF633DFI 374 bp overlap

ChIP HepG2 ENCFF633DFI 477 bp overlap

ZSCAN9 1 dataset

ChIP HepG2 ENCFF196RWJ 352 bp overlap