chr13 : 22,813,552 22,814,702
1,150 bp 150 TFs 2 linked genes
This 1.1 kb open chromatin element is linked to ENSG00000262198 and LINC00621 and is bound by 150 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000262198 70.0 kb Distal Multiome
LINC00621 101.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:22,808,552 – 22,819,702
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
150 transcription factors
Source
Cell type
AR 8 datasets
ChIP LNCaP GSE110655.AR.LNCaP 205 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 227 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 152 bp overlap
ChIP LNCaP_DHT24H GSE58428.AR.LNCaP_DHT24H 183 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 179 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 120 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 70 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 218 bp overlap
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 275 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 112 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 285 bp overlap
BRD3 7 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 140 bp overlap
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 115 bp overlap
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 160 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 202 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 101 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 165 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 113 bp overlap
BRD4 6 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 313 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 199 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 240 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 134 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 137 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 126 bp overlap
CAVIN1 1 dataset
ChIP K562 ENCFF731YBD 282 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 100 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 350 bp overlap
CDK8 2 datasets
ChIP SET-2 GSE65138.CDK8.SET-2 429 bp overlap
ChIP SET-2 GSE65138.CDK8.SET-2 120 bp overlap
CREB3 1 dataset
ChIP K562 ENCFF985QJI 298 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 248 bp overlap
CTCF 1 dataset
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 364 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 147 bp overlap
DDX20 1 dataset
ChIP K562 ENCFF373BEC 249 bp overlap
DIDO1 1 dataset
ChIP K562 ENCFF284OXF 262 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 175 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 556 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 477 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 681 bp overlap
E2F6 4 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 77 bp overlap
ChIP K562 ENCFF136LTS 325 bp overlap
ChIP K562 ENCFF136LTS 325 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 97 bp overlap
EHF 1 dataset
ChIP A549 ENCFF352AOI 232 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 317 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 196 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 236 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 138 bp overlap
FOXA1 3 datasets
ChIP MCF-7 GSE59530.FOXA1.MCF-7 134 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 119 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 241 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 935 bp overlap
ChIP DE DE-FOXA2-2 946 bp overlap
FOXS1 1 dataset
ChIP A549 ENCFF870VDS 225 bp overlap
GATA2 8 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 203 bp overlap
ChIP HepG2 ENCFF905PYM 371 bp overlap
ChIP K562 ENCFF088XQT 411 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 201 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 201 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 191 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF352QVM 481 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 261 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 1062 bp overlap
ChIP DE DE-GATA4-2 1005 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 294 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 486 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 844 bp overlap
ChIP DE DE-GATA6-2 939 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 750 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 663 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 653 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 499 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 439 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 287 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HDAC8 1 dataset
ChIP K562 ENCFF784HCJ 248 bp overlap
HMGA2 1 dataset
ChIP A549 ENCFF624CAQ 242 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 231 bp overlap
HOXB13 2 datasets
ChIP A-549 ENCSR967ZMR.HOXB13.A-549 173 bp overlap
ChIP A549 ENCFF870NOA 254 bp overlap
HSF4 1 dataset
ChIP K562 ENCFF158CQE 220 bp overlap
ID3 2 datasets
ChIP K-562 ENCSR005NMT.ID3.K-562 119 bp overlap
ChIP K562 ENCFF170RNI 320 bp overlap
IKZF1 4 datasets
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
ChIP K562 ENCFF348IBL 480 bp overlap
ChIP K562 ENCFF771OHZ 460 bp overlap
IKZF2 2 datasets
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
ILK 1 dataset
ChIP K562 ENCFF055LPP 233 bp overlap
IRF1 2 datasets
ChIP K562 ENCFF277KTJ 390 bp overlap
ChIP K562 ENCFF277KTJ 190 bp overlap
IRF9 1 dataset
ChIP K562 ENCFF346PQL 249 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 443 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
KLF16 1 dataset
ChIP K562 ENCFF464PIV 345 bp overlap
KLF6 2 datasets
ChIP K-562 ENCSR297CGF.KLF6.K-562 167 bp overlap
ChIP K562 ENCFF948QSP 242 bp overlap
MAX 6 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 141 bp overlap
ChIP HepG2 ENCFF507HCX 366 bp overlap
ChIP K562 ENCFF398VJM 537 bp overlap
ChIP K562 ENCFF398VJM 494 bp overlap
ChIP K562 ENCFF524IJO 333 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 238 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 132 bp overlap
MEF2D 1 dataset
ChIP K562 ENCFF392LDT 293 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 381 bp overlap
MGA 2 datasets
ChIP K562 ENCFF140CEX 585 bp overlap
ChIP K562 ENCFF140CEX 381 bp overlap
MYB 2 datasets
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 240 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 265 bp overlap
MYOD1 1 dataset
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 73 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 344 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 179 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 89 bp overlap
NCOR1 2 datasets
ChIP K562 ENCFF788MPU 184 bp overlap
ChIP K562 ENCFF866HRM 445 bp overlap
NEUROG2 1 dataset
Motif DE_60h DE_60h-NEUROG2_MA0669.1 10 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 457 bp overlap
NR2C1 2 datasets
ChIP K-562 ENCSR178DEG.NR2C1.K-562 193 bp overlap
ChIP K562 ENCFF568JLK 289 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 120 bp overlap
NR4A1 2 datasets
ChIP K-562 ENCSR130PDE.NR4A1.K-562 251 bp overlap
ChIP K562 ENCFF998LHF 119 bp overlap
NR5A2 2 datasets
ChIP A-549 ENCSR190GIW.NR5A2.A-549 183 bp overlap
ChIP A549 ENCFF834RVE 327 bp overlap
ONECUT1 2 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 190 bp overlap
ChIP HepG2 ENCFF243FIR 139 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 215 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 272 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 676 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 779 bp overlap
PRDM10 1 dataset
ChIP K562 ENCFF740YLK 417 bp overlap
PROX1 1 dataset
ChIP HUVEC-C_Prox1OE GSE71230.PROX1.HUVEC-C_Prox1OE 128 bp overlap
PTTG1 1 dataset
ChIP K562 ENCFF017KRM 277 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
RELA 1 dataset
ChIP K562 ENCFF892SPR 281 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF061ATI 445 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 117 bp overlap
Rhox11 1 dataset
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 174 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 295 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 328 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 876 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 717 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 619 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 716 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 530 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 541 bp overlap
ChIP K562 ENCFF628RBP 167 bp overlap
SMARCA4 1 dataset
ChIP K562 ENCFF506JCB 517 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 177 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 257 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 658 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 405 bp overlap
SOX6 1 dataset
ChIP K562 ENCFF059YCJ 437 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 69 bp overlap
SPIB 2 datasets
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
SPIC 2 datasets
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
STAT3 14 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 177 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 367 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 454 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 490 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 470 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 262 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 336 bp overlap
ChIP MDA-MB-361 GSE152203.STAT3.MDA-MB-361 223 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 193 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 195 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 369 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 449 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 429 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 444 bp overlap
Spi1 2 datasets
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
TAL1 1 dataset
ChIP K562 ENCFF620GMX 385 bp overlap
TBX20 1 dataset
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TCF12 1 dataset
ChIP K562 ENCFF931DJY 242 bp overlap
TCF3 2 datasets
ChIP K562 ENCFF319QZT 134 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 197 bp overlap
TEAD1 1 dataset
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
TEAD2 2 datasets
Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap
ChIP K562 ENCFF039ZWC 243 bp overlap
TEAD3 1 dataset
Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Tfcp2l1 1 dataset
Motif DE_60h DE_60h-Tfcp2l1_MA0145.2 14 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 127 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 671 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 146 bp overlap
ZBTB11 2 datasets
ChIP K562 ENCFF215OUF 865 bp overlap
ChIP K562 ENCFF215OUF 541 bp overlap
ZBTB12 1 dataset
ChIP K562 ENCFF933CVM 250 bp overlap
ZBTB17 1 dataset
ChIP K562 ENCFF731UTU 314 bp overlap
ZBTB34 1 dataset
ChIP K562 ENCFF236ZOA 177 bp overlap
ZKSCAN8 1 dataset
ChIP K562 ENCFF387ETI 556 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 621 bp overlap
ZNF175 3 datasets
ChIP K-562 ENCSR011PEI.ZNF175.K-562 208 bp overlap
ChIP K562 ENCFF497AEJ 681 bp overlap
ChIP K562 ENCFF497AEJ 416 bp overlap
ZNF211 2 datasets
Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap
Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap
ZNF215 2 datasets
ChIP K-562 ENCSR699RWG.ZNF215.K-562 192 bp overlap
ChIP K562 ENCFF317MOH 266 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 331 bp overlap
ZNF282 1 dataset
Motif DE_60h DE_60h-ZNF282_MA1154.2 15 bp overlap
ZNF302 1 dataset
ChIP A549 ENCFF333REI 193 bp overlap
ZNF311 2 datasets
ChIP K-562 ENCSR388ZRV.ZNF311.K-562 222 bp overlap
ChIP K562 ENCFF986QSP 159 bp overlap
ZNF354B 1 dataset
ChIP K562 ENCFF955JQT 340 bp overlap
ZNF395 2 datasets
ChIP K562 ENCFF464EIT 281 bp overlap
ChIP K562 ENCFF464EIT 478 bp overlap
ZNF416 1 dataset
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
ZNF583 2 datasets
ChIP K-562 ENCSR775EQV.ZNF583.K-562 180 bp overlap
ChIP K562 ENCFF879KXH 264 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 476 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 247 bp overlap
ChIP K562 ENCFF547OSS 326 bp overlap
ZNF668 1 dataset
ChIP K562 ENCFF112IUE 227 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF447IXE 408 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 605 bp overlap
ZNF830 1 dataset
ChIP K562 ENCFF958IPC 278 bp overlap