chr17 : 63,775,530 63,775,783
253 bp 114 TFs 2 linked genes
This 253 bp open chromatin element is linked to DDX42 and CCDC47 and is bound by 114 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
DDX42 1.7 kb Proximal Proximity
CCDC47 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:63,770,530 – 63,780,783
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP K-562 ENCSR426URK.AFF1.K-562 253 bp overlap
ChIP K562 ENCFF583EEH 253 bp overlap
AR 8 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 252 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 147 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 133 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 218 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 109 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 253 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 145 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 253 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 233 bp overlap
ChIP K562 ENCFF938UXQ 253 bp overlap
ARID2 5 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 204 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 206 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 253 bp overlap
ChIP K-562 ENCSR491EBY.ARID2.K-562 249 bp overlap
ChIP K562 ENCFF099BVK 253 bp overlap
ARNT 3 datasets
ChIP K-562 ENCSR155KHM.ARNT.K-562 253 bp overlap
ChIP K-562 ENCSR613NUC.ARNT.K-562 248 bp overlap
ChIP K562 ENCFF291CXK 253 bp overlap
ASH1L 2 datasets
ChIP K-562 ENCSR115BBC.ASH1L.K-562 253 bp overlap
ChIP K562 ENCFF808EMX 253 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 253 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 153 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 253 bp overlap
BRD3 2 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 231 bp overlap
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 220 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 212 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 253 bp overlap
CHD1 4 datasets
ChIP K-562 ENCSR000AQD.CHD1.K-562 177 bp overlap
ChIP K562 ENCFF118VJV 253 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 249 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 183 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 178 bp overlap
CTCF 1 dataset
ChIP MCF-7 ENCFF139NQI 253 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 253 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 253 bp overlap
ChIP K562 ENCFF775HUO 161 bp overlap
ChIP MCF-7 ENCFF712EXQ 253 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 253 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 222 bp overlap
EP400 2 datasets
ChIP K-562 ENCSR817QKV.EP400.K-562 253 bp overlap
ChIP K562 ENCFF850OZQ 253 bp overlap
ESR1 2 datasets
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 241 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 253 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 221 bp overlap
FOXM1 1 dataset
ChIP K562 ENCFF255RHV 253 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 68 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 253 bp overlap
GATA1 6 datasets
ChIP K-562 GSE107726.GATA1.K-562 204 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 131 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 202 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 178 bp overlap
ChIP erythroblast ENCFF867JAR 253 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 253 bp overlap
GATA2 12 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 153 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 170 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 162 bp overlap
ChIP K562 ENCFF513FTZ 229 bp overlap
ChIP K562 ENCFF830LLA 253 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 140 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 140 bp overlap
ChIP SH-SY5Y ENCFF485YIB 253 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 253 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 227 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 139 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 171 bp overlap
GATA3 5 datasets
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 94 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 253 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 250 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 193 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 253 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 253 bp overlap
ChIP DE DE-GATA4-2 253 bp overlap
ChIP foregut GSE117136.GATA4.foregut 253 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 253 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 216 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 253 bp overlap
ChIP DE DE-GATA6-2 253 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 253 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 253 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 253 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 253 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 253 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 152 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 253 bp overlap
ChIP foregut GSE117136.GATA6.foregut 253 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 253 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 253 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 253 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 253 bp overlap
GLYR1 1 dataset
ChIP HeLa GSE20303.GLYR1.HeLa 229 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 253 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 230 bp overlap
ChIP K562 ENCFF928TKZ 253 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 208 bp overlap
ChIP K562 ENCFF744ALD 253 bp overlap
HDGF 4 datasets
ChIP GM12878 ENCFF653WYI 199 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 253 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 253 bp overlap
ChIP K562 ENCFF682FBH 253 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 253 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 253 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE56288.HOXB13.LNCaP 93 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 253 bp overlap
ChIP K562 ENCFF348IBL 179 bp overlap
ChIP K562 ENCFF771OHZ 221 bp overlap
JUND 1 dataset
ChIP HCT116 ENCFF748ZQX 126 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 153 bp overlap
ChIP K562 ENCFF128TYE 253 bp overlap
KDM5B 1 dataset
ChIP K562 ENCFF049WWX 119 bp overlap
KMT2A 4 datasets
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 253 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 253 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 253 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 79 bp overlap
MAX 1 dataset
ChIP K562 ENCFF110LJS 253 bp overlap
MEN1 2 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 230 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 69 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 245 bp overlap
MLLT1 4 datasets
ChIP K-562 ENCSR675LRO.MLLT1.K-562 253 bp overlap
ChIP K562 ENCFF074XRJ 253 bp overlap
ChIP K562 ENCFF871DSA 253 bp overlap
ChIP MCF-7 ENCFF198JJP 253 bp overlap
MNT 3 datasets
ChIP K-562 ENCSR390VGH.MNT.K-562 253 bp overlap
ChIP K-562 ENCSR512NLO.MNT.K-562 242 bp overlap
ChIP K562 ENCFF820IGH 253 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 200 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 253 bp overlap
ChIP K562 ENCFF441KCP 253 bp overlap
MXI1 1 dataset
ChIP K562 ENCFF336XYS 145 bp overlap
MYC 1 dataset
ChIP K562 ENCFF640IEK 157 bp overlap
NBN 2 datasets
ChIP K-562 ENCSR085QEV.NBN.K-562 253 bp overlap
ChIP K562 ENCFF146YTY 253 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR298JCG.NCOR1.K-562 228 bp overlap
NFIB 1 dataset
ChIP MCF-7 ENCFF799WGQ 253 bp overlap
NFXL1 1 dataset
ChIP MCF-7 ENCFF505SHB 53 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF239KMA 231 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 253 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 253 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 253 bp overlap
PGR 12 datasets
ChIP AB32 GSE31129.PGR.AB32 236 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 253 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 253 bp overlap
ChIP T-47D-A_R5020 GSE80358.PGR.T-47D-A_R5020 240 bp overlap
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 195 bp overlap
ChIP T-47D_PG GSE68356.PGR.T-47D_PG 232 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 253 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 253 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 253 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 253 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 253 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 240 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 190 bp overlap
POLR2A 3 datasets
ChIP K562 ENCFF137JSF 253 bp overlap
ChIP K562 ENCFF514URW 253 bp overlap
ChIP erythroblast ENCFF498VMR 253 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 253 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 233 bp overlap
PRDM10 3 datasets
ChIP HEK293 ENCFF145WQQ 253 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 61 bp overlap
ChIP K562 ENCFF740YLK 176 bp overlap
PRPF4 1 dataset
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 208 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 163 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 69 bp overlap
ChIP HepG2 ENCFF939HTZ 69 bp overlap
ChIP K562 ENCFF196WTG 112 bp overlap
ChIP K562 ENCFF967GRF 112 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 236 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 178 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 209 bp overlap
SIN3A 4 datasets
ChIP K-562 ENCSR920BLG.SIN3A.K-562 188 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 162 bp overlap
ChIP SK-N-SH ENCFF931NFD 229 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 210 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 237 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 253 bp overlap
ChIP K562 ENCFF506JCB 180 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 155 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 141 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 85 bp overlap
SMARCE1 3 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 253 bp overlap
ChIP K562 ENCFF690CFF 253 bp overlap
ChIP K562 ENCFF690CFF 253 bp overlap
SP1 1 dataset
ChIP K562 ENCFF088XXV 253 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 247 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 148 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 184 bp overlap
TAF1 3 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 200 bp overlap
ChIP MCF-7 ENCFF091WNP 123 bp overlap
ChIP MCF-7 ENCFF091WNP 253 bp overlap
TAF9B 1 dataset
ChIP K562 ENCFF121ZIF 253 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 209 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 58 bp overlap
TOE1 2 datasets
ChIP K562 ENCFF728FRA 76 bp overlap
ChIP K562 ENCFF728FRA 253 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 124 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 223 bp overlap
XRCC5 1 dataset
ChIP HepG2 ENCFF680LVJ 253 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 253 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 121 bp overlap
ZKSCAN1 2 datasets
ChIP MCF-7 ENCFF247MBY 239 bp overlap
ChIP MCF-7 ENCSR449UFF.ZKSCAN1.MCF-7 221 bp overlap
ZNF140 2 datasets
ChIP HEK293 GSE76494.ZNF140.HEK293 163 bp overlap
ChIP HEK293 ENCSR464KFG.ZNF140.HEK293 143 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 253 bp overlap
ChIP K562 ENCFF352SDL 253 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 253 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 253 bp overlap
ZNF184 2 datasets
ChIP K-562 ENCSR546IHU.ZNF184.K-562 116 bp overlap
ChIP K562 ENCFF579ZRD 224 bp overlap
ZNF24 3 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 239 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 234 bp overlap
ChIP K562 ENCFF877JCX 253 bp overlap
ZNF260 1 dataset
ChIP HEK293 GSE76494.ZNF260.HEK293 157 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 253 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 165 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 232 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 190 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 253 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 137 bp overlap
ZNF444 2 datasets
ChIP MCF-7 ENCFF602QFR 253 bp overlap
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 231 bp overlap
ZNF512B 1 dataset
ChIP MCF-7 ENCFF233IPF 253 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 173 bp overlap
ZNF671 1 dataset
ChIP HEK293T GSE78099.ZNF671.HEK293T 253 bp overlap
ZNF680 1 dataset
ChIP HEK293 GSE76494.ZNF680.HEK293 158 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF840FYM 253 bp overlap