chr16 : 2,128,331 – 2,128,834
503 bp 119 TFs 2 linked genes
This 503 bp open chromatin element is linked to PKD1 and MIR3180-5 and is bound by 119 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PKD1 7.1 kb Proximal Proximity
MIR3180-5 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:2,123,331 – 2,133,834
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 503 bp overlap
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 310 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 503 bp overlap
ATF2 1 dataset
ChIP HEK293 ENCFF194VKZ 385 bp overlap
ATF3 3 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 146 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 136 bp overlap
ChIP K562 ENCFF604FPV 488 bp overlap
ATF4 3 datasets
ChIP HepG2 ENCFF819ULE 307 bp overlap
ChIP HepG2 ENCFF903ADR 441 bp overlap
ChIP K562 ENCFF674KTF 503 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCFF037PYH 475 bp overlap
CEBPA 2 datasets
ChIP HepG2 ENCFF175DFS 122 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 204 bp overlap
CEBPB 5 datasets
ChIP A549 ENCFF235AIY 257 bp overlap
ChIP HeLa-S3 ENCFF722WEG 265 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 115 bp overlap
ChIP K562 ENCFF584CTB 341 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 289 bp overlap
CEBPD 2 datasets
ChIP HepG2 ENCFF345JDB 305 bp overlap
ChIP HepG2 ENCFF345JDB 167 bp overlap
CEBPG 3 datasets
ChIP HepG2 ENCFF503XBC 121 bp overlap
ChIP K562 ENCFF651CMK 349 bp overlap
ChIP K562 ENCFF783ADE 490 bp overlap
CTCF 5 datasets
ChIP HepG2 ENCFF757EKU 195 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 244 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 198 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 287 bp overlap
ChIP prostate gland ENCFF979KAF 381 bp overlap
Cebpa 13 datasets
ChIP BLaER1 ENCFF031ISE 503 bp overlap
ChIP BLaER1 ENCFF093OYK 503 bp overlap
ChIP BLaER1 ENCFF140EYR 437 bp overlap
ChIP BLaER1 ENCFF140EYR 237 bp overlap
ChIP BLaER1 ENCFF274GAT 479 bp overlap
ChIP BLaER1 ENCFF335XTP 384 bp overlap
ChIP BLaER1 ENCFF341QPD 399 bp overlap
ChIP BLaER1 ENCFF346MCV 320 bp overlap
ChIP BLaER1 ENCFF364PUR 503 bp overlap
ChIP BLaER1 ENCFF460KDD 341 bp overlap
ChIP BLaER1 ENCFF508JZF 432 bp overlap
ChIP BLaER1 ENCFF798NMV 316 bp overlap
ChIP BLaER1 ENCFF844FIP 395 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 286 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 220 bp overlap
EGR1 2 datasets
ChIP HepG2 ENCFF674RQO 454 bp overlap
ChIP HepG2 ENCFF674RQO 252 bp overlap
ELF1 3 datasets
ChIP GM12878 ENCFF432UGA 365 bp overlap
ChIP GM12878 ENCFF692SMY 454 bp overlap
ChIP K562 ENCFF496AKI 277 bp overlap
EP400 2 datasets
ChIP K562 ENCFF850OZQ 503 bp overlap
ChIP K562 ENCFF850OZQ 356 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 503 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 434 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 316 bp overlap
GABPB1 3 datasets
ChIP HepG2 ENCFF315AWN 503 bp overlap
ChIP HepG2 ENCFF315AWN 320 bp overlap
ChIP WTC11 ENCFF166QKI 401 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 503 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 450 bp overlap
ChIP HEK293 ENCFF446EIF 483 bp overlap
HDAC1 3 datasets
ChIP K562 ENCFF872AQB 486 bp overlap
ChIP K562 ENCFF968WBH 419 bp overlap
ChIP K562 ENCFF968WBH 215 bp overlap
HDAC2 2 datasets
ChIP K562 ENCFF919OMP 429 bp overlap
ChIP K562 ENCFF919OMP 221 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 142 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF354NRH 249 bp overlap
ChIP liver ENCFF449HPV 273 bp overlap
HNRNPK 1 dataset
ChIP HepG2 ENCFF493GNS 320 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 137 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 379 bp overlap
JUN 7 datasets
ChIP A549 ENCFF191QZG 503 bp overlap
ChIP A549 ENCFF846DUV 430 bp overlap
ChIP A549 ENCFF846DUV 503 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 413 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 438 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 334 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 450 bp overlap
KDM2A 1 dataset
ChIP HepG2 ENCFF491GTR 491 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 121 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 430 bp overlap
ChIP HEK293 ENCFF159QSW 297 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCFF326EGX 454 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 157 bp overlap
ChIP HEK293 ENCFF658MHR 287 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 339 bp overlap
KLF6 1 dataset
ChIP HepG2 ENCFF834YJR 320 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 191 bp overlap
ChIP HEK293 ENCFF929IAJ 328 bp overlap
KLF9 4 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 69 bp overlap
ChIP HEK293 ENCFF588INF 404 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 192 bp overlap
ChIP MCF-7 ENCFF618FCM 107 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 503 bp overlap
MAX 8 datasets
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 140 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 156 bp overlap
ChIP HepG2 ENCFF507HCX 503 bp overlap
ChIP HepG2 ENCFF507HCX 302 bp overlap
ChIP Ishikawa ENCFF064TDQ 461 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 217 bp overlap
ChIP K562 ENCFF398VJM 438 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 213 bp overlap
MAZ 14 datasets
ChIP GM12878 ENCFF453CES 310 bp overlap
ChIP GM12878 ENCFF453CES 431 bp overlap
ChIP HEK293 ENCFF994GSG 503 bp overlap
ChIP HEK293 ENCFF994GSG 335 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 193 bp overlap
ChIP HepG2 ENCFF867JNL 233 bp overlap
ChIP IMR-90 ENCFF682IKN 345 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 164 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 109 bp overlap
ChIP K562 ENCFF333ZIV 237 bp overlap
ChIP K562 ENCFF809XHP 471 bp overlap
ChIP K562 ENCFF982GSZ 441 bp overlap
ChIP MCF-7 ENCFF913ACQ 385 bp overlap
ChIP MCF-7 ENCFF913ACQ 284 bp overlap
MNT 4 datasets
ChIP K562 ENCFF450LDL 471 bp overlap
ChIP K562 ENCFF820IGH 455 bp overlap
ChIP MCF-7 ENCFF144ZFZ 445 bp overlap
ChIP MCF-7 ENCFF144ZFZ 248 bp overlap
MXI1 4 datasets
ChIP HeLa-S3 ENCSR000ECU.MXI1.HeLa-S3 112 bp overlap
ChIP HepG2 ENCFF493ITN 401 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 137 bp overlap
ChIP SK-N-SH ENCFF746HVJ 491 bp overlap
NONO 2 datasets
ChIP HepG2 ENCFF819JPN 371 bp overlap
ChIP HepG2 ENCFF819JPN 432 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 322 bp overlap
ChIP K562 ENCFF221HJH 236 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 109 bp overlap
NRF1 9 datasets
ChIP Hep-G2 ENCSR853ADA.NRF1.Hep-G2 68 bp overlap
ChIP Hep-G2 GSE97661.NRF1.Hep-G2 65 bp overlap
ChIP HepG2 ENCFF694NVY 138 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 58 bp overlap
ChIP K562 ENCFF130SGK 104 bp overlap
ChIP K562 ENCFF689EWI 183 bp overlap
ChIP K562 ENCFF689EWI 183 bp overlap
ChIP K562 ENCFF791UHF 181 bp overlap
ChIP K562 ENCFF791UHF 92 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCFF875BDB 421 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 368 bp overlap
ChIP HEK293 ENCFF016MNJ 256 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 147 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 396 bp overlap
ChIP HepG2 ENCFF065NWR 503 bp overlap
POLR2A 46 datasets
ChIP GM12878 ENCFF521FXC 298 bp overlap
ChIP GM12892 ENCFF506PGQ 311 bp overlap
ChIP GM15510 ENCFF880HVJ 332 bp overlap
ChIP GM18951 ENCFF079KKO 320 bp overlap
ChIP GM18951 ENCFF079KKO 475 bp overlap
ChIP GM23338 ENCFF450WCS 347 bp overlap
ChIP GM23338 ENCFF450WCS 430 bp overlap
ChIP H1 ENCFF833NJP 278 bp overlap
ChIP HCT116 ENCFF508RDJ 465 bp overlap
ChIP HeLa-S3 ENCFF224LWS 414 bp overlap
ChIP HepG2 ENCFF718XAJ 334 bp overlap
ChIP HepG2 ENCFF718XAJ 391 bp overlap
ChIP K562 ENCFF757TUO 437 bp overlap
ChIP MCF-7 ENCFF164XWP 263 bp overlap
ChIP NB4 ENCFF780KAX 445 bp overlap
ChIP NB4 ENCFF780KAX 262 bp overlap
ChIP Panc1 ENCFF290KAB 162 bp overlap
ChIP Peyer's patch ENCFF767HVN 417 bp overlap
ChIP Raji ENCFF613VGX 361 bp overlap
ChIP SK-N-MC ENCFF088IVG 489 bp overlap
ChIP SK-N-SH ENCFF683PFH 301 bp overlap
ChIP SK-N-SH ENCFF683PFH 431 bp overlap
ChIP body of pancreas ENCFF727UBE 125 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 428 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 319 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 408 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 416 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 438 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 456 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 326 bp overlap
ChIP prostate gland ENCFF832RQK 357 bp overlap
ChIP prostate gland ENCFF881OMH 118 bp overlap
ChIP sigmoid colon ENCFF653CQA 390 bp overlap
ChIP sigmoid colon ENCFF653CQA 338 bp overlap
ChIP sigmoid colon ENCFF725QFT 417 bp overlap
ChIP sigmoid colon ENCFF748YVT 351 bp overlap
ChIP sigmoid colon ENCFF754JQR 276 bp overlap
ChIP spleen ENCFF044PYR 204 bp overlap
ChIP spleen ENCFF446ZGT 327 bp overlap
ChIP spleen ENCFF706IUS 249 bp overlap
ChIP transverse colon ENCFF098HBD 459 bp overlap
ChIP transverse colon ENCFF193UMS 503 bp overlap
ChIP transverse colon ENCFF610RWV 425 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 503 bp overlap
ChIP uterus ENCFF208ADI 442 bp overlap
ChIP vagina ENCFF384GAB 453 bp overlap
POLR2G 3 datasets
ChIP HepG2 ENCFF508UTS 405 bp overlap
ChIP K562 ENCFF047BLG 503 bp overlap
ChIP K562 ENCFF648YPL 371 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 503 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 458 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 503 bp overlap
ChIP K562 ENCFF740YLK 363 bp overlap
RBFOX2 5 datasets
ChIP HepG2 ENCFF554DMZ 226 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 339 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 374 bp overlap
ChIP K562 ENCFF196WTG 414 bp overlap
ChIP K562 ENCFF967GRF 503 bp overlap
REPIN1 2 datasets
ChIP HepG2 ENCFF598VSY 440 bp overlap
ChIP HepG2 ENCFF598VSY 228 bp overlap
RXRA 1 dataset
ChIP HepG2 ENCFF763IEA 498 bp overlap
SAP130 2 datasets
ChIP HepG2 ENCFF892EHZ 503 bp overlap
ChIP HepG2 ENCFF892EHZ 156 bp overlap
SIN3A 2 datasets
ChIP A549 ENCFF752ATT 167 bp overlap
ChIP A549 ENCFF752ATT 350 bp overlap
SKI 1 dataset
ChIP HepG2 ENCFF631IPX 422 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 287 bp overlap
SP1 3 datasets
ChIP K562 ENCFF088XXV 307 bp overlap
ChIP K562 ENCFF088XXV 503 bp overlap
ChIP K562 ENCFF907BMO 452 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 490 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 139 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 135 bp overlap
TAF1 2 datasets
ChIP HepG2 ENCFF946IUP 350 bp overlap
ChIP HepG2 ENCFF961AVP 283 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 221 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCFF951HUW 69 bp overlap
TCF3 2 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 273 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 304 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 206 bp overlap
ChIP HeLa-S3 ENCFF673QAB 501 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 283 bp overlap
TFAP4 3 datasets
ChIP HepG2 ENCFF932XOY 141 bp overlap
ChIP HepG2 ENCFF932XOY 397 bp overlap
ChIP K562 ENCFF727PXG 503 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 367 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 423 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 503 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 475 bp overlap
ZBTB21 1 dataset
ChIP HEK293 ENCFF509WYZ 421 bp overlap
ZBTB26 4 datasets
ChIP HEK293 ENCFF752POA 503 bp overlap
ChIP HEK293 ENCFF752TCU 503 bp overlap
ChIP HEK293 ENCFF752TCU 370 bp overlap
ChIP HEK293 ENCFF752TCU 162 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCFF560VPN 311 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCFF809BPK 404 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCFF191NFH 368 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 503 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 245 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 350 bp overlap
ChIP HEK293 ENCFF847JIE 139 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 154 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 360 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 178 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 445 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 185 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCFF611ZJI 385 bp overlap
ZNF121 2 datasets
ChIP HEK293 ENCFF839FUF 173 bp overlap
ChIP HepG2 ENCFF343YSL 180 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCFF641ICT 363 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCFF308WOW 417 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 186 bp overlap
ZNF324 1 dataset
ChIP HEK293 ENCFF062DPE 405 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 503 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 477 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 493 bp overlap
ZNF384 2 datasets
ChIP HepG2 ENCFF129PLC 104 bp overlap
ChIP K562 ENCFF365NXQ 143 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 391 bp overlap
ZNF423 1 dataset
ChIP HEK293 ENCFF937QHI 100 bp overlap
ZNF449 1 dataset
ChIP HEK293 ENCFF764ZIC 411 bp overlap
ZNF460 1 dataset
ChIP HepG2 ENCFF007NNM 243 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 138 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCFF399XKF 441 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 301 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 403 bp overlap
ZNF614 1 dataset
ChIP HepG2 ENCFF677IUD 467 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 338 bp overlap
ZNF639 1 dataset
ChIP HEK293 ENCFF971ZNH 399 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCFF282RUS 421 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 460 bp overlap
ChIP HepG2 ENCFF653WIX 379 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 388 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 229 bp overlap
ZNF707 1 dataset
ChIP HEK293 ENCFF249FMX 337 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCFF374TCG 442 bp overlap
ZSCAN25 2 datasets
ChIP HepG2 ENCFF265FLD 155 bp overlap
ChIP HepG2 ENCFF265FLD 482 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 337 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 238 bp overlap
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