chr15:84,603,386–84,604,192

chr15 : 84,603,386 – 84,604,192

806 bp 119 TFs 9 linked genes

This 806 bp open chromatin element is linked to 9 target genes and is bound by 119 transcription factors.

Linked Genes

9 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ZSCAN2		2.3 kb	Proximal	Proximity
ENSG00000291159		27.7 kb	Distal	Multiome+HiCAR
ZSCAN2-AS1		30.2 kb	Distal	Multiome+HiCAR
UBE2Q2P1		33.0 kb	Distal	Multiome
WDR73		50.5 kb	Distal	Multiome+HiCAR
NMB		54.4 kb	Distal	Multiome+HiCAR
SEC11A		112.4 kb	Distal	Multiome
ZNF592		144.8 kb	Distal	Multiome
ALPK3		213.6 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

119 transcription factors

ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 144 bp overlap

ChIP breast-cancer_Veh-2858 GSE128018.AR.breast-cancer_Veh-2858 292 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 554 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 167 bp overlap

ChIP GM12878 ENCFF037PYH 178 bp overlap

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 399 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 259 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 359 bp overlap

ChIP HUES-64 GSE104059.BRD1.HUES-64 393 bp overlap

BRD4 7 datasets

ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 689 bp overlap

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 390 bp overlap

ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 225 bp overlap

ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 345 bp overlap

ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 596 bp overlap

ChIP COLO-741 GSE73319.BRD4.COLO-741 86 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 152 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 166 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 255 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 247 bp overlap

CTBP2 2 datasets

ChIP H1 ENCFF329MAX 591 bp overlap

ChIP WA01 ENCSR000EUO.CTBP2.WA01 283 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF031ISE 233 bp overlap

ChIP BLaER1 ENCFF364PUR 251 bp overlap

ChIP GM12878 ENCSR509FWH.DPF2.GM12878 239 bp overlap

Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap

ChIP GM12878 ENCFF266FYW 147 bp overlap

ChIP HepG2 ENCFF752OAT 139 bp overlap

EP300 3 datasets

ChIP H1 ENCFF927IYK 297 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 270 bp overlap

ChIP hESC GSE17917.EP300.hESC 293 bp overlap

ETS1 2 datasets

ChIP GM23338 ENCFF701IZH 377 bp overlap

ChIP hESC ENCSR534VHI.ETS1.hESC 223 bp overlap

FIP1L1 1 dataset

ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 205 bp overlap

FOXA1 2 datasets

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 122 bp overlap

ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 275 bp overlap

FOXD3 1 dataset

Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap

FOXK1 2 datasets

ChIP WTC11 ENCFF875IGU 391 bp overlap

ChIP WTC11 ENCFF875IGU 391 bp overlap

FOXM1 2 datasets

ChIP GM12878 ENCFF264DJE 172 bp overlap

ChIP GM12878 ENCFF264DJE 389 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 195 bp overlap

GRHL2 1 dataset

ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 63 bp overlap

GTF2F1 1 dataset

ChIP K-562 GSE120104.GTF2F1.K-562 125 bp overlap

GTF2I 1 dataset

ChIP WTC11 ENCFF255XXZ 345 bp overlap

Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap

Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap

HDAC2 3 datasets

ChIP H1 ENCFF353UJQ 622 bp overlap

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 194 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 82 bp overlap

HNRNPLL 1 dataset

ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 182 bp overlap

IKZF2 2 datasets

ChIP GM12878 ENCFF238LYK 192 bp overlap

ChIP GM12878 ENCFF918AID 126 bp overlap

ChIP B-cell GSE142493.IRF4.B-cell 56 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 404 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 571 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 332 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 439 bp overlap

ChIP Karpas-299 GSE151413.JUN.Karpas-299 675 bp overlap

ChIP Karpas-299 GSE151413.JUNB.Karpas-299 138 bp overlap

KDM1A 2 datasets

ChIP H1 ENCFF696SGD 372 bp overlap

ChIP H1 ENCFF696SGD 505 bp overlap

KDM5B 1 dataset

ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 110 bp overlap

ChIP WA09 GSE105028.KLF4.WA09 231 bp overlap

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 207 bp overlap

MLLT1 1 dataset

ChIP GM12878 ENCFF995GXC 75 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 452 bp overlap

ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 212 bp overlap

NANOG 11 datasets

ChIP GM23338 ENCFF065NZG 183 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 249 bp overlap

ChIP H1 ENCFF747ZPQ 241 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 649 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 514 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 311 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 806 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 528 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 489 bp overlap

ChIP hESC GSE20650.NANOG.hESC 287 bp overlap

ChIP hESC GSE18292.NANOG.hESC 251 bp overlap

ChIP GM12878 ENCFF213ZNN 316 bp overlap

ChIP GM12878 ENCSR278SQL.NBN.GM12878 311 bp overlap

NCAPH2 1 dataset

ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 221 bp overlap

ChIP GM12878 ENCFF259FWL 212 bp overlap

NIPBL 6 datasets

ChIP WA09 GSE105028.NIPBL.WA09 375 bp overlap

ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 281 bp overlap

ChIP hESC GSE64758.NIPBL.hESC 342 bp overlap

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 247 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 426 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 365 bp overlap

ChIP WTC11 ENCFF634NAO 245 bp overlap

PATZ1 1 dataset

ChIP HEK293 ENCFF016MNJ 78 bp overlap

POLR2A 1 dataset

ChIP GM23338 ENCFF450WCS 491 bp overlap

POU1F1 1 dataset

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F4 1 dataset

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU4F2 1 dataset

Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap

POU5F1 14 datasets

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 619 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 588 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 789 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 198 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 340 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 305 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 227 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 372 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 544 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 269 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 278 bp overlap

POU5F1B 1 dataset

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 133 bp overlap

PROX1 1 dataset

ChIP HepG2 ENCFF016ZJS 89 bp overlap

PTBP1 1 dataset

ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 170 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm5 1 dataset

Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap

ChIP HCC1599 GSE116871.RBPJ.HCC1599 141 bp overlap

RELA 4 datasets

ChIP 786-O GSE86092.RELA.786-O 188 bp overlap

ChIP GM12878 ENCFF513IEN 53 bp overlap

ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 224 bp overlap

ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 56 bp overlap

RELB 2 datasets

ChIP GM12878 ENCFF217ADF 102 bp overlap

ChIP GM12878 ENCSR387QUV.RELB.GM12878 295 bp overlap

ChIP WA09 GSE105028.RNF2.WA09 307 bp overlap

RUNX3 1 dataset

ChIP GM12878 ENCFF395WHA 272 bp overlap

SCRT1 1 dataset

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 254 bp overlap

SCRT2 2 datasets

ChIP HEK293 ENCFF711QQB 325 bp overlap

ChIP HEK293 ENCFF711QQB 450 bp overlap

ChIP WTC11 ENCFF891HYW 377 bp overlap

SMAD2 2 datasets

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 447 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 441 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 390 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 392 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 295 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 368 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 171 bp overlap

SMARCA4 2 datasets

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 294 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 515 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 355 bp overlap

SMARCC1 3 datasets

ChIP ESC S25-ESC-d0-BAF155-exp1 400 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 252 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 405 bp overlap

SOX2 4 datasets

ChIP H9 GSE46837.SOX2.H9 229 bp overlap

ChIP hESC GSE18292.SOX2.hESC 242 bp overlap

ChIP hESC GSE69479.SOX2.hESC 191 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 380 bp overlap

ChIP H1 ENCFF263FUH 321 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 239 bp overlap

ChIP WTC11 ENCFF688PEU 501 bp overlap

SREBF2 1 dataset

Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap

SRSF3 2 datasets

ChIP K-562 GSE120104.SRSF3.K-562 196 bp overlap

ChIP K-562 ENCSR268QIQ.SRSF3.K-562 160 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 200 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 270 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 301 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 210 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 167 bp overlap

ChIP NPC GSE154479.TCF3.NPC 286 bp overlap

ChIP breast-organoid GSE113909.TCF7.breast-organoid 178 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 405 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 673 bp overlap

TFAP4::ETV1 1 dataset

Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif ES_0h ES_0h-TFAP4FLI1_MA1967.2 14 bp overlap

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 389 bp overlap

TRIM28 1 dataset

ChIP hESC GSE115387.TRIM28.hESC 375 bp overlap

ChIP Huh-7 GSE97411.YY1.Huh-7 318 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 375 bp overlap

ZBTB33 1 dataset

ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 372 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 205 bp overlap

ZBTB7B 1 dataset

Motif ES_0h ES_0h-ZBTB7B_MA0694.2 10 bp overlap

ZBTB7C 1 dataset

Motif ES_0h ES_0h-ZBTB7C_MA0695.2 8 bp overlap

ZBTB8A 1 dataset

ChIP HEK293 ENCFF303WRD 121 bp overlap

ChIP HEK293 ENCFF847JIE 52 bp overlap

ZMAT4 1 dataset

ChIP WTC11 ENCFF608UXZ 241 bp overlap

ZMYM3 1 dataset

ChIP GM12878 GSE97661.ZMYM3.GM12878 383 bp overlap

ZNF143 2 datasets

ChIP WA09 GSE105028.ZNF143.WA09 237 bp overlap

ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 231 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 318 bp overlap

ZNF257 1 dataset

ChIP HEK293T GSE78099.ZNF257.HEK293T 132 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 360 bp overlap

ZNF300 1 dataset

ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap

ZNF362 1 dataset

ChIP HepG2 ENCFF256AZN 274 bp overlap

ZNF384 2 datasets

ChIP GM12878 ENCFF229VSP 96 bp overlap

ChIP HEK293T ENCFF019DZX 120 bp overlap

ZNF396 1 dataset

ChIP WTC11 ENCFF776JWJ 281 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 317 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 413 bp overlap

ZNF687 1 dataset

ChIP HepG2 ENCFF653WIX 426 bp overlap

ZNF891 1 dataset

ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 161 bp overlap