chr11 : 93,624,139 93,625,031
892 bp 122 TFs 5 linked genes
This 892 bp open chromatin element is linked to 5 target genes and is bound by 122 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
CEP295 37.1 kb Distal Multiome
SMCO4 81.2 kb Distal Multiome
TAF1D 116.9 kb Distal Multiome
C11orf54 117.0 kb Distal Multiome
MED17 159.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:93,619,139 – 93,630,031
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
122 transcription factors
Source
Cell type
AR 4 datasets
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 87 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 113 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 143 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 87 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 229 bp overlap
ASH2L 2 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 153 bp overlap
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 82 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 221 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 221 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 193 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 374 bp overlap
BRD4 5 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 122 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 124 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 153 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 98 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 138 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 238 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 56 bp overlap
E2F4 2 datasets
ChIP Hep-G2 ENCSR924LSO.E2F4.Hep-G2 94 bp overlap
ChIP HepG2 ENCFF311TOD 152 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF167CZS 254 bp overlap
ChIP GM12878 ENCFF813OXE 241 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 196 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 226 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 182 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 288 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 160 bp overlap
FOXA1 21 datasets
ChIP HEK293_eGFP_TFS GSE123618.FOXA1.HEK293_eGFP_TFS 166 bp overlap
ChIP HEK293_v5_TFS GSE123618.FOXA1.HEK293_v5_TFS 202 bp overlap
ChIP HepG2 ENCFF207NVJ 100 bp overlap
ChIP HepG2 ENCFF361KNY 181 bp overlap
ChIP HepG2 ENCFF740VZW 83 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 165 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 70 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 102 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 111 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 116 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 177 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 146 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 165 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 131 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 165 bp overlap
ChIP T47D-A1-2_Dex GSE112491.FOXA1.T47D-A1-2_Dex 198 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 147 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 175 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 198 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 172 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 115 bp overlap
FOXA2 10 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 128 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 104 bp overlap
ChIP DE DE-FOXA2-1 744 bp overlap
ChIP DE DE-FOXA2-2 733 bp overlap
ChIP HepG2 ENCFF533COJ 187 bp overlap
ChIP HepG2 ENCFF570ABM 122 bp overlap
ChIP HepG2 ENCFF894AYY 229 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 155 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 129 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 65 bp overlap
FOXA3 3 datasets
ChIP K562 ENCFF348SOM 255 bp overlap
ChIP K562 ENCFF348SOM 53 bp overlap
ChIP K562 ENCFF781VSC 183 bp overlap
FOXK1 2 datasets
ChIP HEK293T GSE51673.FOXK1.HEK293T 101 bp overlap
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 159 bp overlap
FOXO1 1 dataset
ChIP primary-chondrocyte GSE144026.FOXO1.primary-chondrocyte 148 bp overlap
FOXP1 2 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF823ERM 235 bp overlap
GABPA 4 datasets
ChIP Hep-G2 GSE72082.GABPA.Hep-G2 53 bp overlap
ChIP HepG2 ENCFF180FFY 124 bp overlap
ChIP K-562 ENCSR290MUH.GABPA.K-562 175 bp overlap
ChIP K562 ENCFF139LXS 278 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 563 bp overlap
ChIP DE DE-GATA4-2 726 bp overlap
ChIP foregut GSE117136.GATA4.foregut 483 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 531 bp overlap
ChIP DE DE-GATA6-2 732 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 669 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 706 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 444 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 719 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 689 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 599 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 497 bp overlap
ChIP foregut GSE117136.GATA6.foregut 392 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 299 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 164 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 247 bp overlap
GTF2B 1 dataset
ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 72 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 196 bp overlap
HINFP 1 dataset
ChIP HepG2 ENCFF838COC 228 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 166 bp overlap
HNF4A 7 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 81 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 131 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 81 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 115 bp overlap
ChIP HepG2 ENCFF146SSF 166 bp overlap
ChIP HepG2 ENCFF669NAM 101 bp overlap
ChIP liver ENCFF354NRH 200 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 147 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 283 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 142 bp overlap
IRF4 4 datasets
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 233 bp overlap
ChIP OCI-Ly3 GSE56857.IRF4.OCI-Ly3 225 bp overlap
ChIP OCI-Ly3 GSE142493.IRF4.OCI-Ly3 220 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 169 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 541 bp overlap
LIN54 2 datasets
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 55 bp overlap
ChIP HepG2 ENCFF662XDE 251 bp overlap
MAX 6 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 99 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 127 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 93 bp overlap
ChIP HepG2 ENCFF507HCX 268 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 308 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 269 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 202 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 207 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 290 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 711 bp overlap
ChIP HepG2 ENCFF057YJE 317 bp overlap
MIXL1 1 dataset
ChIP HepG2 ENCFF817YFO 209 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 111 bp overlap
MTA2 3 datasets
ChIP GM12878 ENCFF615CWQ 421 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 292 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 152 bp overlap
MYBL2 1 dataset
ChIP HepG2 ENCFF650QJC 177 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 227 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 74 bp overlap
MYOD1 3 datasets
ChIP RH4 GSE83726.MYOD1.RH4 186 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 190 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 159 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 137 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 139 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 231 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 192 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 104 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 112 bp overlap
PDX1 4 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 163 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 329 bp overlap
ChIP islet ERP001456.PDX1.islet 166 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 241 bp overlap
PGR 1 dataset
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 58 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 72 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 350 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 149 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 295 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 184 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 123 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 160 bp overlap
RARA 2 datasets
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 243 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 375 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 148 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 187 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 216 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 411 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 149 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 158 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 160 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 408 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 511 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 420 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 185 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 377 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 616 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 238 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 371 bp overlap
SPI1 3 datasets
ChIP GM12878 ENCFF134LCP 262 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 190 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 137 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 131 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 212 bp overlap
STAT3 1 dataset
ChIP OCI-Ly3 GSE50723.STAT3.OCI-Ly3 144 bp overlap
SUZ12 1 dataset
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 265 bp overlap
TBX5 7 datasets
ChIP G296S GSE85628.TBX5.G296S 362 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 362 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 176 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 400 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 342 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 225 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 236 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCFF506WWB 198 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 159 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 170 bp overlap
TEAD1 3 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 141 bp overlap
ChIP HepG2 ENCFF661PNM 203 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 179 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 232 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 269 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 225 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 238 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 479 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 119 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 181 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 131 bp overlap
ZEB2 3 datasets
ChIP HEK293 ENCFF847JIE 351 bp overlap
ChIP HEK293 ENCFF847JIE 148 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 264 bp overlap
ZGPAT 2 datasets
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 223 bp overlap
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 90 bp overlap
ZKSCAN5 1 dataset
ChIP HepG2 ENCFF579HCQ 206 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 184 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 163 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 363 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 183 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 160 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 125 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 139 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 161 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 129 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 176 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 138 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 118 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 144 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 333 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 255 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 163 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 184 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 118 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 211 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 158 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 116 bp overlap