chr5 : 135,072,705 135,073,293
588 bp 103 TFs 0 linked genes
This 588 bp open chromatin element has no linked target genes and is bound by 103 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:135,067,705 – 135,078,293
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 305 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 235 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 175 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 198 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 376 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 299 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 158 bp overlap
BRD3 1 dataset
ChIP MM1-S GSE43743.BRD3.MM1-S 270 bp overlap
BRD4 8 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 480 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 168 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 183 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 366 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 361 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 357 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 294 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 419 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 133 bp overlap
CDK9 4 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 328 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 323 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 522 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 501 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 229 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 570 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 304 bp overlap
CTCF 9 datasets
ChIP MM1-S GSE43743.CTCF.MM1-S 338 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 189 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 118 bp overlap
ChIP endodermal cell ENCFF471YCZ 375 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 397 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 305 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 559 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 179 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 511 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 150 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 114 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 210 bp overlap
ESR1 24 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 175 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 255 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 298 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 203 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 151 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 198 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 181 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 241 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 334 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 280 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 120 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 385 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 196 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 470 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 292 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 262 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 131 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 235 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 164 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 288 bp overlap
ChIP ZR751_E2_TAM ERP000380.ESR1.ZR751_E2_TAM 177 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 298 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 230 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 259 bp overlap
EZH2 2 datasets
ChIP H1 ENCFF232NZA 73 bp overlap
ChIP H1 ENCFF232NZA 273 bp overlap
FOXA1 13 datasets
ChIP LS180 GSE140533.FOXA1.LS180 217 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 247 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 248 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 189 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 170 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 128 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 277 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 259 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 424 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 257 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 450 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 332 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 243 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 280 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 268 bp overlap
ChIP DE DE-FOXA2-1 495 bp overlap
ChIP DE DE-FOXA2-2 494 bp overlap
FOXC1 1 dataset
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 374 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 585 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 225 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 213 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 144 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 115 bp overlap
HOXB13 2 datasets
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 259 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 304 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 330 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 527 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 116 bp overlap
JUND 1 dataset
ChIP H1 ENCFF468JZD 231 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 320 bp overlap
KLF14 1 dataset
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap
KLF5 2 datasets
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
ChIP HCC95_E419Q GSE88976.KLF5.HCC95_E419Q 193 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MAZ 1 dataset
Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap
MED1 5 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 178 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 290 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 401 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 440 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 447 bp overlap
MXI1 1 dataset
ChIP WA01 ENCSR000EBR.MXI1.WA01 152 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 373 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 225 bp overlap
MYOD1 7 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 170 bp overlap
ChIP RD GSE137168.MYOD1.RD 260 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 224 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 255 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 302 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 269 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 333 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 387 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 226 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 298 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 227 bp overlap
POLR2A 6 datasets
ChIP H1 ENCFF833NJP 411 bp overlap
ChIP esophagus squamous epithelium ENCFF297FPP 282 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 206 bp overlap
ChIP esophagus squamous epithelium ENCFF947QGB 281 bp overlap
ChIP prostate gland ENCFF881OMH 151 bp overlap
ChIP vagina ENCFF384GAB 500 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 588 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 199 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 189 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 215 bp overlap
RNF2 1 dataset
ChIP WA01 GSE104690.RNF2.WA01 204 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 124 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 398 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 365 bp overlap
SIN3A 7 datasets
ChIP H1 ENCFF042ZSL 440 bp overlap
ChIP H1 ENCFF896IJG 294 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 372 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 260 bp overlap
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 216 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 167 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 276 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 124 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 396 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 213 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 213 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 356 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 323 bp overlap
SNAI2 1 dataset
ChIP PC-9_1DF GSE131687.SNAI2.PC-9_1DF 269 bp overlap
SOX13 1 dataset
Motif DE_60h DE_60h-SOX13_MA1120.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 311 bp overlap
SOX2 4 datasets
Motif DE_60h DE_60h-SOX2_MA0143.5 7 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 331 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 394 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 256 bp overlap
SP3 1 dataset
Motif DE_60h DE_60h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap
SRF 1 dataset
Motif DE_60h DE_60h-SRF_MA0083.3 16 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 162 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 167 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 204 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 223 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 157 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 244 bp overlap
Sox3 1 dataset
Motif DE_60h DE_60h-Sox3_MA0514.3 7 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 233 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 401 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 562 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 391 bp overlap
TEAD4 3 datasets
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 337 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 377 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 157 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 187 bp overlap
TFDP1 1 dataset
ChIP MM1-S GSE80661.TFDP1.MM1-S 197 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 306 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 175 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 288 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 296 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 397 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 323 bp overlap
ZC3H4 1 dataset
ChIP K562 ENCFF343JOP 401 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 341 bp overlap
ZIC5 1 dataset
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZNF148 1 dataset
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
ChIP WTC11 ENCFF551GAV 377 bp overlap
ChIP WTC11 ENCFF551GAV 219 bp overlap
ZNF331 1 dataset
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 296 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap