chr1 : 95,069,417 95,069,586
169 bp 124 TFs 2 linked genes
This 169 bp open chromatin element is linked to ALG14 and CNN3-DT and is bound by 124 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ALG14 3.3 kb Proximal Proximity
CNN3-DT 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:95,064,417 – 95,074,586
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 169 bp overlap
ARID1B 1 dataset
ChIP Hep-G2 GSE69566.ARID1B.Hep-G2 71 bp overlap
ARID3A 3 datasets
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 139 bp overlap
ChIP HepG2 ENCFF122GLS 169 bp overlap
ChIP HepG2 ENCFF341DES 169 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 169 bp overlap
ARNTL 1 dataset
ChIP Hep-G2 ENCSR794LVK.ARNTL.Hep-G2 144 bp overlap
ASH2L 3 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF207QHL 166 bp overlap
ChIP HepG2 ENCFF207QHL 67 bp overlap
ATF1 2 datasets
ChIP HepG2 ENCFF239LTQ 169 bp overlap
ChIP HepG2 ENCFF239LTQ 169 bp overlap
BCL6 2 datasets
ChIP HepG2 ENCFF423EJH 169 bp overlap
ChIP HepG2 ENCFF423EJH 122 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 70 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 169 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 169 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 169 bp overlap
CHD4 1 dataset
ChIP HepG2 ENCFF615GUT 169 bp overlap
CREM 3 datasets
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF049UDY 169 bp overlap
ChIP HepG2 ENCFF049UDY 169 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 169 bp overlap
DRAP1 2 datasets
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF296JHR 169 bp overlap
EHMT2 1 dataset
ChIP HepG2 ENCFF004KYI 169 bp overlap
ELF1 2 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 159 bp overlap
ChIP HepG2 ENCFF838BCU 101 bp overlap
ELF3 2 datasets
ChIP HepG2 ENCFF633ULY 169 bp overlap
ChIP HepG2 ENCFF633ULY 98 bp overlap
ELF4 1 dataset
ChIP HepG2 ENCFF752OAT 169 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF354ACD 169 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 169 bp overlap
ETV4 1 dataset
ChIP HepG2 ENCFF534CDD 169 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 73 bp overlap
FOXA1 11 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 169 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 169 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 169 bp overlap
ChIP HepG2 ENCFF207NVJ 169 bp overlap
ChIP HepG2 ENCFF740VZW 169 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 169 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 169 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 169 bp overlap
ChIP liver ENCFF537QZV 169 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 169 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 169 bp overlap
FOXA2 15 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 169 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 169 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 151 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 111 bp overlap
ChIP DE DE-FOXA2-1 169 bp overlap
ChIP DE DE-FOXA2-2 169 bp overlap
ChIP HepG2 ENCFF533COJ 169 bp overlap
ChIP HepG2 ENCFF570ABM 169 bp overlap
ChIP HepG2 ENCFF894AYY 169 bp overlap
ChIP HepG2 ENCFF894AYY 103 bp overlap
ChIP liver ENCFF877SFI 169 bp overlap
ChIP liver ENCFF888VJF 169 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 169 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 159 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 169 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 123 bp overlap
FOXJ3 2 datasets
ChIP Hep-G2 ENCSR413AJG.FOXJ3.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF430OSX 169 bp overlap
FOXP1 2 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF823ERM 169 bp overlap
FOXP4 3 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF462ULY 169 bp overlap
ChIP HepG2 ENCFF462ULY 127 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 121 bp overlap
ChIP DE DE-GATA4-2 116 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 169 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 169 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 93 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 169 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 169 bp overlap
GFI1 2 datasets
ChIP HepG2 ENCFF472INF 135 bp overlap
ChIP HepG2 ENCFF472INF 169 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 169 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 138 bp overlap
ChIP HepG2 ENCFF990GUQ 169 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 169 bp overlap
HNF1A 6 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 169 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 169 bp overlap
ChIP Hep-G2 ENCSR800QIT.HNF1A.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF352VYI 169 bp overlap
ChIP HepG2 ENCFF540TRC 169 bp overlap
ChIP NY15 GSE108150.HNF1A.NY15 169 bp overlap
HNF1B 3 datasets
ChIP H9 ERP004206.HNF1B.H9 169 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 169 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 169 bp overlap
HNF4A 10 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 169 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 169 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 144 bp overlap
ChIP HepG2 ENCFF146SSF 169 bp overlap
ChIP HepG2 ENCFF669NAM 169 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 132 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 169 bp overlap
ChIP liver ENCFF354NRH 169 bp overlap
ChIP liver ENCFF449HPV 169 bp overlap
ChIP liver ERP002306.HNF4A.liver 148 bp overlap
HNF4G 3 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF323ATZ 169 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 169 bp overlap
HNRNPUL1 4 datasets
ChIP Hep-G2 GSE120104.HNRNPUL1.Hep-G2 169 bp overlap
ChIP Hep-G2 ENCSR183AXJ.HNRNPUL1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF066YCU 169 bp overlap
ChIP HepG2 ENCFF150IKP 169 bp overlap
HOXA3 1 dataset
ChIP HepG2 ENCFF374TCI 50 bp overlap
IRF2 2 datasets
ChIP HepG2 ENCFF532TQV 169 bp overlap
ChIP HepG2 ENCFF532TQV 52 bp overlap
ISL2 1 dataset
ChIP HepG2 ENCFF742RIP 56 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 169 bp overlap
JUND 2 datasets
ChIP HepG2 ENCFF869OPW 169 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 169 bp overlap
KAT8 1 dataset
ChIP HepG2 ENCFF890JFC 169 bp overlap
KDM1A 2 datasets
ChIP HepG2 ENCFF240UWG 169 bp overlap
ChIP HepG2 ENCFF240UWG 169 bp overlap
KDM6A 1 dataset
ChIP HepG2 ENCFF135ECT 169 bp overlap
KLF16 2 datasets
ChIP HepG2 ENCFF969FFI 169 bp overlap
ChIP HepG2 ENCFF969FFI 67 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 69 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 169 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 102 bp overlap
MAX 4 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF507HCX 169 bp overlap
ChIP liver ENCFF584QGB 169 bp overlap
ChIP liver ENCFF584QGB 142 bp overlap
MAZ 1 dataset
ChIP HepG2 ENCFF068NYH 169 bp overlap
MED1 2 datasets
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 162 bp overlap
ChIP HepG2 ENCFF495TSS 169 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 169 bp overlap
ChIP HepG2 ENCFF057YJE 169 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 168 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF650QJC 169 bp overlap
MYC 1 dataset
ChIP HepG2 ENCFF575FXK 72 bp overlap
NACC2 1 dataset
ChIP HepG2 ENCFF165SVB 90 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 169 bp overlap
NCOR1 1 dataset
ChIP HepG2 ENCFF685NAH 169 bp overlap
NFIC 3 datasets
ChIP Hep-G2 GSE108514.NFIC.Hep-G2 61 bp overlap
ChIP Hep-G2 ENCSR000BQX.NFIC.Hep-G2 100 bp overlap
ChIP HepG2 ENCFF169TKU 169 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 162 bp overlap
NONO 2 datasets
ChIP Hep-G2 GSE120104.NONO.Hep-G2 167 bp overlap
ChIP Hep-G2 ENCSR923UTX.NONO.Hep-G2 167 bp overlap
NR2F2 1 dataset
ChIP HepG2 ENCFF483TVJ 169 bp overlap
NR2F6 2 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF514UJI 169 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 88 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF243FIR 60 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 160 bp overlap
ONECUT2 1 dataset
ChIP HepG2 ENCFF460COO 124 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF526NOJ 169 bp overlap
PHF21A 2 datasets
ChIP HepG2 ENCFF525EUW 169 bp overlap
ChIP HepG2 ENCFF525EUW 169 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 159 bp overlap
POLR2A 2 datasets
ChIP HepG2 ENCFF736SLT 169 bp overlap
ChIP transverse colon ENCFF610RWV 169 bp overlap
POLR2G 4 datasets
ChIP HepG2 ENCFF241AEG 161 bp overlap
ChIP HepG2 ENCFF241AEG 169 bp overlap
ChIP HepG2 ENCFF508UTS 161 bp overlap
ChIP HepG2 ENCFF508UTS 169 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 147 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF329FBJ 169 bp overlap
PRDM15 2 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF259LUZ 169 bp overlap
PROX1 3 datasets
ChIP HepG2 ENCFF016ZJS 169 bp overlap
ChIP HepG2 ENCFF016ZJS 55 bp overlap
ChIP SW480 GSE60390.PROX1.SW480 98 bp overlap
RAD21 2 datasets
ChIP HepG2 ENCFF360ZSW 124 bp overlap
ChIP liver ENCFF522JHE 169 bp overlap
RARA 2 datasets
ChIP HepG2 ENCFF582XUA 169 bp overlap
ChIP HepG2 ENCFF582XUA 77 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 169 bp overlap
ChIP HepG2 ENCFF554DMZ 111 bp overlap
ChIP HepG2 ENCFF939HTZ 169 bp overlap
ChIP HepG2 ENCFF939HTZ 169 bp overlap
RBPJ 1 dataset
ChIP HepG2 ENCFF367CFI 169 bp overlap
REST 3 datasets
ChIP HepG2 ENCFF122AWR 67 bp overlap
ChIP liver ENCFF240FWT 169 bp overlap
ChIP liver ENCSR867WPH.REST.liver 169 bp overlap
RXRA 3 datasets
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 140 bp overlap
ChIP liver ENCFF077DAP 169 bp overlap
ChIP liver ENCFF807CIA 154 bp overlap
RXRB 1 dataset
ChIP HepG2 ENCFF539ZAY 169 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 57 bp overlap
SALL2 2 datasets
ChIP HepG2 ENCFF458XOD 169 bp overlap
ChIP HepG2 ENCFF458XOD 169 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 169 bp overlap
SATB2 1 dataset
ChIP HepG2 ENCFF749IAK 169 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 169 bp overlap
SKI 2 datasets
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF631IPX 169 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 169 bp overlap
SMAD3 2 datasets
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF309PKF 86 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 89 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 169 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 166 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 103 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF767OCK 169 bp overlap
SP1 4 datasets
ChIP Hep-G2 ENCSR000BJX.SP1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF123KAM 169 bp overlap
ChIP liver ENCFF597LFJ 169 bp overlap
ChIP liver ENCFF769YSM 169 bp overlap
TAF1 2 datasets
ChIP liver ENCFF610UQP 169 bp overlap
ChIP liver ENCFF610UQP 169 bp overlap
TARDBP 1 dataset
ChIP HepG2 ENCFF356JNC 169 bp overlap
TBX2 2 datasets
ChIP HepG2 ENCFF811TLA 89 bp overlap
ChIP HepG2 ENCFF811TLA 169 bp overlap
TCF7L2 1 dataset
ChIP HepG2 ENCFF510OLG 169 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 169 bp overlap
TFE3 2 datasets
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF268PFH 169 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 169 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 169 bp overlap
YY1 4 datasets
ChIP HepG2 ENCFF956MUY 169 bp overlap
ChIP liver ENCFF400MBC 169 bp overlap
ChIP liver ENCFF515BWJ 169 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 169 bp overlap
ZBTB33 2 datasets
ChIP liver ENCFF592BJA 169 bp overlap
ChIP liver ENCFF592BJA 169 bp overlap
ZBTB40 3 datasets
ChIP Hep-G2 ENCSR525YFS.ZBTB40.Hep-G2 164 bp overlap
ChIP HepG2 ENCFF130IRD 169 bp overlap
ChIP HepG2 ENCFF162FPR 169 bp overlap
ZBTB43 1 dataset
ChIP HepG2 ENCFF487RQI 144 bp overlap
ZFP64 2 datasets
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF873EPM 169 bp overlap
ZFY 1 dataset
ChIP HepG2 ENCFF106ELT 169 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 169 bp overlap
ZNF503 1 dataset
ChIP HepG2 ENCFF923HZL 169 bp overlap
ZNF792 1 dataset
ChIP HepG2 ENCFF825WPU 169 bp overlap
ZSCAN20 2 datasets
ChIP HepG2 ENCFF159KVX 169 bp overlap
ChIP HepG2 ENCFF159KVX 121 bp overlap